Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0094
(783 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY075334-1|AAL68200.1| 329|Drosophila melanogaster GH13458p pro... 31 2.3
AE014297-3656|AAN14024.1| 309|Drosophila melanogaster CG7021-PB... 31 2.3
AE014297-3655|AAF56355.2| 329|Drosophila melanogaster CG7021-PA... 31 2.3
L26502-1|AAB58976.1| 2764|Drosophila melanogaster neurofibromin ... 29 7.2
L26501-1|AAB58975.1| 2802|Drosophila melanogaster neurofibromin ... 29 7.2
L26500-1|AAB58977.1| 2802|Drosophila melanogaster neurofibromin ... 29 7.2
AE014297-3891|AAF56543.3| 2802|Drosophila melanogaster CG8318-PB... 29 7.2
AE014297-3890|AAX52994.1| 2764|Drosophila melanogaster CG8318-PD... 29 7.2
AE014297-3889|AAN14067.2| 2746|Drosophila melanogaster CG8318-PC... 29 7.2
L05109-1|AAA70421.1| 632|Drosophila melanogaster poly(A)-bindin... 29 9.5
AY118528-1|AAM49897.1| 634|Drosophila melanogaster LD24412p pro... 29 9.5
AE013599-2628|AAS64811.1| 634|Drosophila melanogaster CG5119-PH... 29 9.5
AE013599-2627|AAM68178.1| 634|Drosophila melanogaster CG5119-PG... 29 9.5
AE013599-2626|AAF57747.1| 634|Drosophila melanogaster CG5119-PF... 29 9.5
AE013599-2625|AAM68177.1| 634|Drosophila melanogaster CG5119-PE... 29 9.5
AE013599-2624|AAM68176.1| 634|Drosophila melanogaster CG5119-PD... 29 9.5
AE013599-2623|AAF57746.1| 634|Drosophila melanogaster CG5119-PC... 29 9.5
AE013599-2622|AAF57745.1| 634|Drosophila melanogaster CG5119-PB... 29 9.5
AE013599-2621|AAM68175.1| 634|Drosophila melanogaster CG5119-PA... 29 9.5
>AY075334-1|AAL68200.1| 329|Drosophila melanogaster GH13458p
protein.
Length = 329
Score = 30.7 bits (66), Expect = 2.3
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = +1
Query: 229 GAFTPGSKPGTHGF--YPFPGTFRRQYNMY 312
GA PG PGT + YP+PG + QY Y
Sbjct: 187 GAGAPGYFPGTGAYPGYPYPGVYLPQYPAY 216
>AE014297-3656|AAN14024.1| 309|Drosophila melanogaster CG7021-PB,
isoform B protein.
Length = 309
Score = 30.7 bits (66), Expect = 2.3
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = +1
Query: 229 GAFTPGSKPGTHGF--YPFPGTFRRQYNMY 312
GA PG PGT + YP+PG + QY Y
Sbjct: 167 GAGAPGYFPGTGAYPGYPYPGVYLPQYPAY 196
>AE014297-3655|AAF56355.2| 329|Drosophila melanogaster CG7021-PA,
isoform A protein.
Length = 329
Score = 30.7 bits (66), Expect = 2.3
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = +1
Query: 229 GAFTPGSKPGTHGF--YPFPGTFRRQYNMY 312
GA PG PGT + YP+PG + QY Y
Sbjct: 187 GAGAPGYFPGTGAYPGYPYPGVYLPQYPAY 216
>L26502-1|AAB58976.1| 2764|Drosophila melanogaster neurofibromin
protein.
Length = 2764
Score = 29.1 bits (62), Expect = 7.2
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +3
Query: 15 FQLETFSQWFYTLLTCAVESNYALYV 92
F+ E +WFY L T A E+ +A+Y+
Sbjct: 1685 FRTEFLQKWFYVLPTVAYENVHAVYI 1710
>L26501-1|AAB58975.1| 2802|Drosophila melanogaster neurofibromin
protein.
Length = 2802
Score = 29.1 bits (62), Expect = 7.2
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +3
Query: 15 FQLETFSQWFYTLLTCAVESNYALYV 92
F+ E +WFY L T A E+ +A+Y+
Sbjct: 1685 FRTEFLQKWFYVLPTVAYENVHAVYI 1710
>L26500-1|AAB58977.1| 2802|Drosophila melanogaster neurofibromin
protein.
Length = 2802
Score = 29.1 bits (62), Expect = 7.2
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +3
Query: 15 FQLETFSQWFYTLLTCAVESNYALYV 92
F+ E +WFY L T A E+ +A+Y+
Sbjct: 1685 FRTEFLQKWFYVLPTVAYENVHAVYI 1710
>AE014297-3891|AAF56543.3| 2802|Drosophila melanogaster CG8318-PB,
isoform B protein.
Length = 2802
Score = 29.1 bits (62), Expect = 7.2
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +3
Query: 15 FQLETFSQWFYTLLTCAVESNYALYV 92
F+ E +WFY L T A E+ +A+Y+
Sbjct: 1685 FRTEFLQKWFYVLPTVAYENVHAVYI 1710
>AE014297-3890|AAX52994.1| 2764|Drosophila melanogaster CG8318-PD,
isoform D protein.
Length = 2764
Score = 29.1 bits (62), Expect = 7.2
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +3
Query: 15 FQLETFSQWFYTLLTCAVESNYALYV 92
F+ E +WFY L T A E+ +A+Y+
Sbjct: 1685 FRTEFLQKWFYVLPTVAYENVHAVYI 1710
>AE014297-3889|AAN14067.2| 2746|Drosophila melanogaster CG8318-PC,
isoform C protein.
Length = 2746
Score = 29.1 bits (62), Expect = 7.2
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +3
Query: 15 FQLETFSQWFYTLLTCAVESNYALYV 92
F+ E +WFY L T A E+ +A+Y+
Sbjct: 1685 FRTEFLQKWFYVLPTVAYENVHAVYI 1710
>L05109-1|AAA70421.1| 632|Drosophila melanogaster poly(A)-binding
protein protein.
Length = 632
Score = 28.7 bits (61), Expect = 9.5
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -2
Query: 629 VFLNDCNEDNGDEYVKEFQEPVSFITEY 546
V++ + ED DE +KEF EP IT Y
Sbjct: 183 VYVKNFTEDFDDEKLKEFFEPYGKITSY 210
>AY118528-1|AAM49897.1| 634|Drosophila melanogaster LD24412p
protein.
Length = 634
Score = 28.7 bits (61), Expect = 9.5
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -2
Query: 629 VFLNDCNEDNGDEYVKEFQEPVSFITEY 546
V++ + ED DE +KEF EP IT Y
Sbjct: 185 VYVKNFTEDFDDEKLKEFFEPYGKITSY 212
>AE013599-2628|AAS64811.1| 634|Drosophila melanogaster CG5119-PH,
isoform H protein.
Length = 634
Score = 28.7 bits (61), Expect = 9.5
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -2
Query: 629 VFLNDCNEDNGDEYVKEFQEPVSFITEY 546
V++ + ED DE +KEF EP IT Y
Sbjct: 185 VYVKNFTEDFDDEKLKEFFEPYGKITSY 212
>AE013599-2627|AAM68178.1| 634|Drosophila melanogaster CG5119-PG,
isoform G protein.
Length = 634
Score = 28.7 bits (61), Expect = 9.5
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -2
Query: 629 VFLNDCNEDNGDEYVKEFQEPVSFITEY 546
V++ + ED DE +KEF EP IT Y
Sbjct: 185 VYVKNFTEDFDDEKLKEFFEPYGKITSY 212
>AE013599-2626|AAF57747.1| 634|Drosophila melanogaster CG5119-PF,
isoform F protein.
Length = 634
Score = 28.7 bits (61), Expect = 9.5
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -2
Query: 629 VFLNDCNEDNGDEYVKEFQEPVSFITEY 546
V++ + ED DE +KEF EP IT Y
Sbjct: 185 VYVKNFTEDFDDEKLKEFFEPYGKITSY 212
>AE013599-2625|AAM68177.1| 634|Drosophila melanogaster CG5119-PE,
isoform E protein.
Length = 634
Score = 28.7 bits (61), Expect = 9.5
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -2
Query: 629 VFLNDCNEDNGDEYVKEFQEPVSFITEY 546
V++ + ED DE +KEF EP IT Y
Sbjct: 185 VYVKNFTEDFDDEKLKEFFEPYGKITSY 212
>AE013599-2624|AAM68176.1| 634|Drosophila melanogaster CG5119-PD,
isoform D protein.
Length = 634
Score = 28.7 bits (61), Expect = 9.5
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -2
Query: 629 VFLNDCNEDNGDEYVKEFQEPVSFITEY 546
V++ + ED DE +KEF EP IT Y
Sbjct: 185 VYVKNFTEDFDDEKLKEFFEPYGKITSY 212
>AE013599-2623|AAF57746.1| 634|Drosophila melanogaster CG5119-PC,
isoform C protein.
Length = 634
Score = 28.7 bits (61), Expect = 9.5
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -2
Query: 629 VFLNDCNEDNGDEYVKEFQEPVSFITEY 546
V++ + ED DE +KEF EP IT Y
Sbjct: 185 VYVKNFTEDFDDEKLKEFFEPYGKITSY 212
>AE013599-2622|AAF57745.1| 634|Drosophila melanogaster CG5119-PB,
isoform B protein.
Length = 634
Score = 28.7 bits (61), Expect = 9.5
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -2
Query: 629 VFLNDCNEDNGDEYVKEFQEPVSFITEY 546
V++ + ED DE +KEF EP IT Y
Sbjct: 185 VYVKNFTEDFDDEKLKEFFEPYGKITSY 212
>AE013599-2621|AAM68175.1| 634|Drosophila melanogaster CG5119-PA,
isoform A protein.
Length = 634
Score = 28.7 bits (61), Expect = 9.5
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -2
Query: 629 VFLNDCNEDNGDEYVKEFQEPVSFITEY 546
V++ + ED DE +KEF EP IT Y
Sbjct: 185 VYVKNFTEDFDDEKLKEFFEPYGKITSY 212
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,504,650
Number of Sequences: 53049
Number of extensions: 868883
Number of successful extensions: 2560
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 2440
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2560
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3613676352
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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