Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0094
         (783 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81593-3|CAB04741.1|  332|Caenorhabditis elegans Hypothetical pr...    30   1.6  
Z22177-9|CAE18052.1|  110|Caenorhabditis elegans Hypothetical pr...    30   2.1  
Z81047-12|CAB60283.1|  322|Caenorhabditis elegans Hypothetical p...    29   2.8  
AF040650-3|ABE73333.1|  836|Caenorhabditis elegans Hypothetical ...    29   3.7  
AF040650-2|AAT81190.1|  939|Caenorhabditis elegans Hypothetical ...    29   3.7  
AF040650-1|AAB95011.1|  952|Caenorhabditis elegans Hypothetical ...    29   3.7  
Z66563-2|CAA91469.3| 2557|Caenorhabditis elegans Hypothetical pr...    29   5.0  
AL132846-3|CAB60346.2| 1648|Caenorhabditis elegans Hypothetical ...    28   6.6  
Z92786-10|CAB07212.3|  984|Caenorhabditis elegans Hypothetical p...    28   8.7  
Z46381-3|CAA86516.1|  354|Caenorhabditis elegans Hypothetical pr...    28   8.7  
L14324-6|AAA28182.1| 3343|Caenorhabditis elegans Cadherin family...    28   8.7  
AL021473-3|CAA16306.3|  984|Caenorhabditis elegans Hypothetical ...    28   8.7  

>Z81593-3|CAB04741.1|  332|Caenorhabditis elegans Hypothetical
           protein T20B3.3 protein.
          Length = 332

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 16/59 (27%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
 Frame = +2

Query: 5   RAVLSIGNVLTMVLHVTNMCC-----GIKLRTICFVIAYLHLVSCVLDIAFHLLTVAIV 166
           R VL + + +++ +HV  + C      I ++++ + +  +HL SC+LD+    LT   V
Sbjct: 19  RLVLHVISFISIPIHVFGVFCVFFKTPISMQSVKWSMMNVHLFSCLLDLGLSFLTTPFV 77


>Z22177-9|CAE18052.1|  110|Caenorhabditis elegans Hypothetical
           protein ZK512.11 protein.
          Length = 110

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 10/32 (31%), Positives = 20/32 (62%)
 Frame = +3

Query: 531 PHFFDIFGNETYWFLKLLDIFIAVVFITIIQK 626
           P F ++F  ET++    L + +AV+F+ ++ K
Sbjct: 37  PTFNELFDEETFYVFAFLVVLVAVIFVIVMAK 68


>Z81047-12|CAB60283.1|  322|Caenorhabditis elegans Hypothetical
           protein C41G6.14 protein.
          Length = 322

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 12/38 (31%), Positives = 22/38 (57%)
 Frame = +2

Query: 290 LGVSTICMLSTHRLSQSPDAIPVFSTCTWLTSSIFSLI 403
           L + +IC L  HR+     ++PV ST  + +  +FS++
Sbjct: 107 LDILSICFLQKHRVIMRLKSLPVISTGMYTSIIVFSIV 144


>AF040650-3|ABE73333.1|  836|Caenorhabditis elegans Hypothetical
           protein T04B8.5c protein.
          Length = 836

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 17/67 (25%), Positives = 35/67 (52%)
 Frame = +1

Query: 451 RNPEPMRMFLSLSIVKVVMQSFISDTNRISSIYSVMKLTGS*NSLTYSSPLSSLQSFRNT 630
           RNP    +   + +V V +   ++   +++SI+ ++   G  N  T +  L+S  +FR T
Sbjct: 329 RNPVVSVVITWMCVVLVFLVGAMNKIAKLTSIFFLLSYMGV-NVATLALELTSAPNFRPT 387

Query: 631 QKHCAWK 651
            K+ +W+
Sbjct: 388 FKYFSWQ 394


>AF040650-2|AAT81190.1|  939|Caenorhabditis elegans Hypothetical
           protein T04B8.5b protein.
          Length = 939

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 17/67 (25%), Positives = 35/67 (52%)
 Frame = +1

Query: 451 RNPEPMRMFLSLSIVKVVMQSFISDTNRISSIYSVMKLTGS*NSLTYSSPLSSLQSFRNT 630
           RNP    +   + +V V +   ++   +++SI+ ++   G  N  T +  L+S  +FR T
Sbjct: 432 RNPVVSVVITWMCVVLVFLVGAMNKIAKLTSIFFLLSYMGV-NVATLALELTSAPNFRPT 490

Query: 631 QKHCAWK 651
            K+ +W+
Sbjct: 491 FKYFSWQ 497


>AF040650-1|AAB95011.1|  952|Caenorhabditis elegans Hypothetical
           protein T04B8.5a protein.
          Length = 952

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 17/67 (25%), Positives = 35/67 (52%)
 Frame = +1

Query: 451 RNPEPMRMFLSLSIVKVVMQSFISDTNRISSIYSVMKLTGS*NSLTYSSPLSSLQSFRNT 630
           RNP    +   + +V V +   ++   +++SI+ ++   G  N  T +  L+S  +FR T
Sbjct: 445 RNPVVSVVITWMCVVLVFLVGAMNKIAKLTSIFFLLSYMGV-NVATLALELTSAPNFRPT 503

Query: 631 QKHCAWK 651
            K+ +W+
Sbjct: 504 FKYFSWQ 510


>Z66563-2|CAA91469.3| 2557|Caenorhabditis elegans Hypothetical
           protein F46C3.3 protein.
          Length = 2557

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
 Frame = -1

Query: 528 GIRNK*LHHDLYYGEAEEHSHRFGISLI*CSQIGHDNPQPNQINEKIEDVNQV-HVENTG 352
           G RN  + +++Y+G ++E   +FGI  +   +  + N Q N       DVN+  H+E+  
Sbjct: 179 GERNFNIFYEVYHGLSDEMKAKFGIKGL--QKFFYIN-QGNSSENIQHDVNRFKHLESAL 235

Query: 351 IASGLCDNRCVLNIHIVLT 295
              G  D+ C+    I+ T
Sbjct: 236 HVLGFSDDHCMSIYKIIST 254


>AL132846-3|CAB60346.2| 1648|Caenorhabditis elegans Hypothetical
            protein Y43D4A.5 protein.
          Length = 1648

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 13/41 (31%), Positives = 22/41 (53%)
 Frame = -2

Query: 593  EYVKEFQEPVSFITEYIEEMRLVSEINDCITTFTMERLRNI 471
            EY KEF++ +  +     E+  +SEIND   + T +R   +
Sbjct: 1128 EYQKEFEQQIRDVRMIDAEINRISEINDAGRSKTSQRCSQV 1168


>Z92786-10|CAB07212.3|  984|Caenorhabditis elegans Hypothetical
           protein Y20C6A.1 protein.
          Length = 984

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 14/46 (30%), Positives = 23/46 (50%)
 Frame = -2

Query: 602 NGDEYVKEFQEPVSFITEYIEEMRLVSEINDCITTFTMERLRNIRI 465
           NG ++V   Q+    I    ++  + + I   +TT TM   +NIRI
Sbjct: 316 NGTQFVFRIQKLAMKIRTVFQQTAVPNYIRRAVTTQTMNETKNIRI 361


>Z46381-3|CAA86516.1|  354|Caenorhabditis elegans Hypothetical
           protein M01F1.3 protein.
          Length = 354

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
 Frame = +3

Query: 579 LLDIFIAVVFITIIQKYTKALRLEKGNWYLREAPFLRR---MPDSNGKPPRFSQR 734
           L D   +      ++KY   L+LEKG+  LR  P+L++   +P  N    R  ++
Sbjct: 27  LQDFISSASVAEAVEKYEGKLKLEKGDRRLRLPPWLKKEKILPSENENVSRLKKQ 81


>L14324-6|AAA28182.1| 3343|Caenorhabditis elegans Cadherin family
            protein 3 protein.
          Length = 3343

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 12/39 (30%), Positives = 24/39 (61%)
 Frame = -2

Query: 668  EIPVALFQAQCFCVFLNDCNEDNGDEYVKEFQEPVSFIT 552
            ++P+    A+CFC    DC +D  +E +++ Q+ ++ IT
Sbjct: 2952 DLPLKKLTARCFCSSGIDCYDDTTNETIQKTQK-INVIT 2989


>AL021473-3|CAA16306.3|  984|Caenorhabditis elegans Hypothetical
           protein Y20C6A.1 protein.
          Length = 984

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 14/46 (30%), Positives = 23/46 (50%)
 Frame = -2

Query: 602 NGDEYVKEFQEPVSFITEYIEEMRLVSEINDCITTFTMERLRNIRI 465
           NG ++V   Q+    I    ++  + + I   +TT TM   +NIRI
Sbjct: 316 NGTQFVFRIQKLAMKIRTVFQQTAVPNYIRRAVTTQTMNETKNIRI 361


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,704,309
Number of Sequences: 27780
Number of extensions: 451451
Number of successful extensions: 1298
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1237
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1298
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1893203640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)