Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0094
         (783 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF393495-1|AAL60420.1|  136|Apis mellifera odorant binding prote...    24   1.8  
AF393492-1|AAL60417.1|  136|Apis mellifera odorant binding prote...    24   1.8  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    23   3.2  
DQ667194-1|ABG75746.1|  391|Apis mellifera cys-loop ligand-gated...    23   4.2  
AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.     23   4.2  
AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter...    22   7.4  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                22   7.4  

>AF393495-1|AAL60420.1|  136|Apis mellifera odorant binding protein
           ASP4 protein.
          Length = 136

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 9/35 (25%), Positives = 16/35 (45%)
 Frame = -3

Query: 196 VINVALEAISDNSNCQQMKRYIQDTRHQMQISDDE 92
           +I   +   +D   C   ++YI     +M+  DDE
Sbjct: 95  IIEQCVSKAADEDECMVARKYIDCALEKMKFLDDE 129


>AF393492-1|AAL60417.1|  136|Apis mellifera odorant binding protein
           ASP4 protein.
          Length = 136

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 9/35 (25%), Positives = 16/35 (45%)
 Frame = -3

Query: 196 VINVALEAISDNSNCQQMKRYIQDTRHQMQISDDE 92
           +I   +   +D   C   ++YI     +M+  DDE
Sbjct: 95  IIEQCVSKAADEDECMVARKYIDCALEKMKFLDDE 129


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 11/41 (26%), Positives = 14/41 (34%)
 Frame = +1

Query: 226 CGAFTPGSKPGTHGFYPFPGTFRRQYNMYVEYTSIIAEPRC 348
           CG    G   G H      G FRR     ++Y       +C
Sbjct: 70  CGDKASGFHYGVHSCEGCKGFFRRSIQQKIQYRPCTKNQQC 110


>DQ667194-1|ABG75746.1|  391|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 391

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 13/45 (28%), Positives = 21/45 (46%)
 Frame = +3

Query: 582 LDIFIAVVFITIIQKYTKALRLEKGNWYLREAPFLRRMPDSNGKP 716
           +DI I  ++I     + + LRL  G   +   P L+ +    GKP
Sbjct: 125 MDIQICPIYIESFSYHKQKLRLRWGTGAVTVNPELKLLQYDIGKP 169


>AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.
          Length = 247

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 9/24 (37%), Positives = 18/24 (75%)
 Frame = -3

Query: 163 NSNCQQMKRYIQDTRHQMQISDDE 92
           NSN  Q+K++++DT +++  + DE
Sbjct: 168 NSNIFQLKQHMRDTMNKIAETLDE 191


>AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter
           Am-EAAT protein.
          Length = 543

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 7/29 (24%), Positives = 17/29 (58%)
 Frame = -1

Query: 87  IVRNLIPQHMLVTCRTIVRTFPIERTART 1
           I+RN++P++++  C    +T  + +   T
Sbjct: 190 IIRNMVPENLVQACFQQAQTTYVTKEVAT 218


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = +1

Query: 217 LGGCGAFTPGSKPGTHGFYP 276
           LG     +PG  P T GF P
Sbjct: 294 LGRSACHSPGVYPSTAGFLP 313


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 242,636
Number of Sequences: 438
Number of extensions: 5564
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24639531
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)