Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0093
         (749 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g37360.1 68417.m05291 cytochrome P450 family protein cytochro...    29   4.4  
At4g33985.1 68417.m04822 expressed protein                             29   4.4  
At3g16370.1 68416.m02071 GDSL-motif lipase/hydrolase family prot...    28   5.8  
At3g51310.1 68416.m05616 vacuolar protein sorting-associated pro...    28   7.6  
At2g45530.1 68415.m05662 zinc finger (C3HC4-type RING finger) fa...    28   7.6  

>At4g37360.1 68417.m05291 cytochrome P450 family protein cytochrome
           P450 monooxygenase, Arabidopsis thaliana, PID:d1029478
          Length = 499

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
 Frame = -2

Query: 391 LPTVPGIEAVTFVNFLSAFRCLSNVVSQE--VGALNV--AVFAWTGAFAAQYRSLIWNNP 224
           LP +  I + T   + +A   L +V S++  VG  ++       T A+A     L+W++P
Sbjct: 348 LPYLQNIVSETLRLYPAAPMLLPHVASKDCKVGGYDMPRGTMLLTNAWAIHRDPLLWDDP 407

Query: 223 *SFEPLRF 200
            SF+P RF
Sbjct: 408 TSFKPERF 415


>At4g33985.1 68417.m04822 expressed protein
          Length = 154

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = +2

Query: 83  HEMRSRA*AEETWLRRKSHEELGMSGRAR 169
           H     A  EE WLR+K  + LG  GR++
Sbjct: 19  HSWSPDADREEAWLRKKGKQSLGRLGRSK 47


>At3g16370.1 68416.m02071 GDSL-motif lipase/hydrolase family protein
           similar to family II lipases EXL3 GI:15054386, EXL1
           GI:15054382, EXL2 GI:15054384 from [Arabidopsis
           thaliana]; contains Pfam profile: PF00657 Lipase
           Acylhydrolase with GDSL-like motif
          Length = 353

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 15/35 (42%), Positives = 21/35 (60%)
 Frame = -3

Query: 684 SKRLRARFEYAICVLSASFLTFLDNVKVNLNLYRV 580
           SK+  +  + AIC+LSA    F+ N  VN  LY+V
Sbjct: 150 SKKADSIIKGAICLLSAGSSDFVQNYYVNPLLYKV 184


>At3g51310.1 68416.m05616 vacuolar protein sorting-associated
           protein 35 family protein / VPS35 family protein similar
           to vacuolar protein sorting 35 [Mus musculus]
           GI:11875394; contains Pfam profile PF03635: Vacuolar
           protein sorting-associated protein 35
          Length = 783

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 19/51 (37%), Positives = 27/51 (52%)
 Frame = -3

Query: 552 GRCSNYIQISLNFYLKTRTKHTGLFRGDRIESLAEVHSGI*QLLISGKEPW 400
           G  S Y+++ LN YL    K      GD I+SLAE+     + + SG EP+
Sbjct: 702 GSVSLYVEL-LNKYLYFLEKGNQQVTGDTIKSLAELIKSETKKVESGAEPF 751


>At2g45530.1 68415.m05662 zinc finger (C3HC4-type RING finger)
           family protein contains Pfam profile: PF00097 zinc
           finger, C3HC4 type (RING finger)
          Length = 240

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 4/62 (6%)
 Frame = +2

Query: 230 VPDQRPVLGSKGASPGKDCNVKCSDLLTDDITKAAKCAKKIYKRHR--FDAWYGWK--NH 397
           +P ++ V  S+  S  + C V   D     I    +C   + K HR   DAW+  K  N 
Sbjct: 56  IPPEKEVSLSRNGSSHEQCRVCLQDKEEVLIELGCQCRGGLAKAHRSCIDAWFRTKGSNQ 115

Query: 398 CQ 403
           C+
Sbjct: 116 CE 117


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,559,933
Number of Sequences: 28952
Number of extensions: 275539
Number of successful extensions: 660
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 644
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 660
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1663169840
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)