Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0092
(775 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_04_0272 - 16278136-16278289,16278873-16278970,16279090-162792... 105 3e-23
02_05_0620 - 30412004-30412429,30412509-30412646,30412729-304128... 56 3e-08
06_01_1105 + 9102059-9102167,9103770-9103907,9104125-9104267,910... 55 5e-08
02_01_0550 + 4044683-4044784,4044862-4044975,4045277-4045360,404... 50 2e-06
01_05_0545 + 23109920-23110040,23113363-23113505,23113626-231140... 45 6e-05
07_01_0637 + 4767021-4767083,4767175-4767249,4767339-4767500,476... 44 2e-04
04_04_0154 - 23146445-23146535,23146689-23146795,23146933-231469... 44 2e-04
01_05_0544 + 23098921-23098953,23099209-23099272,23099942-231000... 43 2e-04
06_03_0627 + 22903346-22903523,22906010-22906152,22906235-229066... 42 5e-04
11_01_0550 + 4355857-4356051,4357287-4357355,4357429-4357561,435... 37 0.020
12_01_0497 + 3946179-3946322,3947274-3947342,3948733-3948829,395... 36 0.036
05_01_0259 + 1990180-1990428,1990768-1991526 32 0.44
09_06_0261 - 21919017-21920594 31 1.0
08_02_0811 + 21438848-21439001,21439469-21439662,21439769-214398... 31 1.0
12_01_0721 + 6353254-6353646 31 1.3
03_02_0878 + 12088119-12088233,12088511-12088608,12088689-120887... 31 1.3
05_06_0214 - 26425100-26425922,26426008-26426058,26426183-264262... 30 1.8
03_04_0001 - 16208401-16208778 29 4.1
08_02_0717 + 20372728-20372836,20372936-20373078,20374131-203742... 29 5.4
08_02_0099 + 12343518-12343678,12344193-12344393,12344669-123448... 29 5.4
02_05_1011 + 33487670-33487958,33490794-33492100,33492541-334928... 29 5.4
01_06_1533 + 38041499-38041681,38041853-38041985,38042816-380429... 29 5.4
07_01_0355 + 2597592-2598280,2599150-2599426 28 7.2
06_01_0627 - 4567304-4567521,4567649-4567727,4567827-4568165,456... 28 7.2
04_04_1356 + 32854585-32854832,32854948-32855148,32855270-328554... 28 7.2
04_03_0810 - 19902049-19902069,19902195-19902400,19902523-199025... 28 7.2
09_01_0080 - 1168032-1168046,1168374-1168431,1168516-1168631,116... 28 9.5
01_03_0184 + 13560830-13562981,13563604-13564088 28 9.5
>09_04_0272 -
16278136-16278289,16278873-16278970,16279090-16279230,
16279701-16279865,16279941-16280117,16280330-16280510,
16280784-16280829,16281178-16281241,16281331-16281353,
16281964-16282036,16282410-16282541,16283343-16283429,
16283488-16283700
Length = 517
Score = 105 bits (253), Expect = 3e-23
Identities = 42/66 (63%), Positives = 54/66 (81%)
Frame = +2
Query: 497 VPVRRPGHVLIEKWNPLGVVGIITAFNFPVAVFGWNSAIAMVCGDATVWKPSETTPLVAV 676
+P RP H+++E WNPLGVVG+ITAFNFP AV GWN+ IA+VCG+ VWK + TTPL+ +
Sbjct: 165 IPSERPNHMMMEVWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITI 224
Query: 677 AVTKIV 694
A+TKIV
Sbjct: 225 AMTKIV 230
Score = 101 bits (242), Expect = 6e-22
Identities = 48/71 (67%), Positives = 57/71 (80%)
Frame = +3
Query: 306 LPAPARGEVVRQIGDALRENLQPLGKLVSLEMGKILPEAIGEVIEYIHVCDLALGLSRTL 485
+PAP RGE+VRQIGDALR L LG+LVSLEMGKILPE IGEV E I +CD A+GLSR L
Sbjct: 101 IPAPKRGEIVRQIGDALRAKLHHLGRLVSLEMGKILPEGIGEVQEIIDMCDYAVGLSRQL 160
Query: 486 PGTVFPSDVPD 518
G++ PS+ P+
Sbjct: 161 NGSIIPSERPN 171
Score = 32.3 bits (70), Expect = 0.44
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +2
Query: 107 KYSFLKDLGLKENNVGVFN-GKWKANGEVIKSYSPANGK 220
++ FL +LGL N G F G W +G V+ S +P N +
Sbjct: 8 EHQFLAELGLAPRNPGSFACGAWGGSGPVVTSTNPTNNQ 46
>02_05_0620 -
30412004-30412429,30412509-30412646,30412729-30412866,
30412966-30413139,30413211-30413684,30413775-30413917,
30414002-30414160,30414943-30415042
Length = 583
Score = 56.0 bits (129), Expect = 3e-08
Identities = 27/68 (39%), Positives = 39/68 (57%)
Frame = +2
Query: 497 VPVRRPGHVLIEKWNPLGVVGIITAFNFPVAVFGWNSAIAMVCGDATVWKPSETTPLVAV 676
VP P HV + P+GV G I +NFP+ +F W A+ CG+A V K +E TPL A+
Sbjct: 196 VPADGPHHVQVLH-EPIGVAGQIIPWNFPLLMFAWKVGPALACGNAVVLKTAEQTPLSAL 254
Query: 677 AVTKIVEK 700
V ++ +
Sbjct: 255 FVASLLHE 262
>06_01_1105 +
9102059-9102167,9103770-9103907,9104125-9104267,
9104362-9104515,9104610-9104839,9105382-9105471,
9105606-9105779,9105873-9106010,9106212-9106349,
9106450-9106511,9106744-9106972,9108531-9109364
Length = 812
Score = 55.2 bits (127), Expect = 5e-08
Identities = 26/68 (38%), Positives = 39/68 (57%)
Frame = +2
Query: 497 VPVRRPGHVLIEKWNPLGVVGIITAFNFPVAVFGWNSAIAMVCGDATVWKPSETTPLVAV 676
VP P HV + P+GV G I +NFP+ +F W A+ CG+ V K +E TPL A+
Sbjct: 192 VPADGPHHVQVLH-EPIGVAGQIIPWNFPLLMFAWKVGPALACGNTVVLKTAEQTPLSAL 250
Query: 677 AVTKIVEK 700
+K++ +
Sbjct: 251 FASKLLHE 258
>02_01_0550 +
4044683-4044784,4044862-4044975,4045277-4045360,
4045818-4045917,4046923-4046971,4047071-4047158,
4047251-4047361,4047771-4047833,4047942-4048052,
4048517-4048582,4048689-4048766,4049553-4049630,
4049784-4049850,4049930-4050015,4050301-4050333,
4050426-4050458,4050754-4050854,4050986-4051071,
4051478-4051584,4051683-4051839,4051854-4051984
Length = 614
Score = 50.0 bits (114), Expect = 2e-06
Identities = 23/50 (46%), Positives = 31/50 (62%)
Frame = +2
Query: 542 PLGVVGIITAFNFPVAVFGWNSAIAMVCGDATVWKPSETTPLVAVAVTKI 691
P+GVVG +T +NFP+A+ A+ CG V KPSE TPL A+A +
Sbjct: 217 PVGVVGAVTPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAADL 266
>01_05_0545 +
23109920-23110040,23113363-23113505,23113626-23114009,
23114106-23114219,23114310-23114483,23114608-23114745,
23114884-23115021,23115094-23115155,23115268-23115541
Length = 515
Score = 45.2 bits (102), Expect = 6e-05
Identities = 21/54 (38%), Positives = 31/54 (57%)
Frame = +2
Query: 542 PLGVVGIITAFNFPVAVFGWNSAIAMVCGDATVWKPSETTPLVAVAVTKIVEKC 703
P+GVVG+I +NFP +F + A+ G V KP+E TPL A+ + + C
Sbjct: 164 PIGVVGVIIPWNFPTMMFFLKVSPALAAGCTIVVKPAEQTPLSALYYAHLAKLC 217
>07_01_0637 +
4767021-4767083,4767175-4767249,4767339-4767500,
4767624-4767702,4767922-4768076,4768225-4768288,
4768928-4769007,4769366-4769431,4769932-4769982,
4770087-4770238,4770270-4770287,4770323-4770413,
4771156-4771236,4771330-4771407,4772315-4772350,
4772425-4772468,4772567-4772645,4773035-4773125,
4773268-4773374
Length = 523
Score = 43.6 bits (98), Expect = 2e-04
Identities = 21/50 (42%), Positives = 28/50 (56%)
Frame = +2
Query: 542 PLGVVGIITAFNFPVAVFGWNSAIAMVCGDATVWKPSETTPLVAVAVTKI 691
PLGV I FNFP + W IA+ CG+ V KPSE P A+ + ++
Sbjct: 159 PLGVCAGICPFNFPAMIPLWMFPIAVTCGNTFVLKPSEKDPGAAMMLAEL 208
>04_04_0154 -
23146445-23146535,23146689-23146795,23146933-23146993,
23147070-23147221,23147306-23147383,23147696-23147809,
23147880-23147956,23148128-23148194,23148341-23148406,
23148528-23148651,23148733-23148825,23149446-23149594,
23149681-23149761,23150502-23150644,23150758-23150872
Length = 505
Score = 43.6 bits (98), Expect = 2e-04
Identities = 19/45 (42%), Positives = 27/45 (60%)
Frame = +2
Query: 542 PLGVVGIITAFNFPVAVFGWNSAIAMVCGDATVWKPSETTPLVAV 676
P+GVVG+IT +N+P+ + W A A+ G V KPSE L +
Sbjct: 153 PIGVVGLITPWNYPLLMATWKVAPALAAGCTAVLKPSELASLTCL 197
>01_05_0544 +
23098921-23098953,23099209-23099272,23099942-23100084,
23100246-23100719,23100950-23101123,23101230-23101367,
23101489-23101589,23101910-23102183
Length = 466
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/56 (41%), Positives = 33/56 (58%)
Frame = +2
Query: 509 RPGHVLIEKWNPLGVVGIITAFNFPVAVFGWNSAIAMVCGDATVWKPSETTPLVAV 676
RP H K P+GVVG I +N+P +F + ++ A+ G V KP+E TPL A+
Sbjct: 146 RPCHGYTLK-EPVGVVGHIVPWNYPTTMFFFKASPALAAGCTMVVKPAEQTPLSAL 200
>06_03_0627 +
22903346-22903523,22906010-22906152,22906235-22906618,
22906980-22907069,22907147-22907320,22907414-22907551,
22907719-22907856,22907958-22908019,22908240-22908513
Length = 526
Score = 41.9 bits (94), Expect = 5e-04
Identities = 20/45 (44%), Positives = 27/45 (60%)
Frame = +2
Query: 542 PLGVVGIITAFNFPVAVFGWNSAIAMVCGDATVWKPSETTPLVAV 676
PLGV G+I +NFP +F + A+ G V KP+E TPL A+
Sbjct: 183 PLGVAGLIVPWNFPAIMFFSKVSPALAAGCTVVVKPAEQTPLSAL 227
>11_01_0550 +
4355857-4356051,4357287-4357355,4357429-4357561,
4358248-4358454,4358601-4358716,4358814-4358918,
4359008-4359180,4359273-4359363,4359682-4359831,
4359928-4360173
Length = 494
Score = 36.7 bits (81), Expect = 0.020
Identities = 19/51 (37%), Positives = 29/51 (56%)
Frame = +2
Query: 542 PLGVVGIITAFNFPVAVFGWNSAIAMVCGDATVWKPSETTPLVAVAVTKIV 694
PLGVV +I+A+N+P + A+ G+A V KPSE P + K++
Sbjct: 118 PLGVVLVISAWNYPFLLSIDPVIGAIAAGNAVVLKPSEIAPATSALFAKLL 168
>12_01_0497 +
3946179-3946322,3947274-3947342,3948733-3948829,
3951827-3952033,3952149-3952264,3953189-3953293,
3953380-3953552,3953647-3953737,3953869-3954018,
3954482-3954724
Length = 464
Score = 35.9 bits (79), Expect = 0.036
Identities = 18/53 (33%), Positives = 31/53 (58%)
Frame = +2
Query: 542 PLGVVGIITAFNFPVAVFGWNSAIAMVCGDATVWKPSETTPLVAVAVTKIVEK 700
PLGVV +I+A+N+P + A+ G+A V KPSE P + + +++ +
Sbjct: 89 PLGVVLVISAWNYPFLLSIDPIIGAIAAGNAVVLKPSEVAPATSSLLAELLPR 141
>05_01_0259 + 1990180-1990428,1990768-1991526
Length = 335
Score = 32.3 bits (70), Expect = 0.44
Identities = 27/103 (26%), Positives = 42/103 (40%), Gaps = 4/103 (3%)
Frame = -2
Query: 756 DGTVECDGHQVNVVPSAAHFSTILVTATATSGVVSDGFQTVASPQTIAIALFHPKTATGK 577
DGT +PS A LV + A G+ +D ++ + L H TG+
Sbjct: 158 DGTASSASDVARFIPSPAFHLQDLVDSFAAKGLTADDLVILSGAH--SFGLTHCAFVTGR 215
Query: 576 LKAVMMPTTPSGFHFSI-RTCPGRLTGTQYRGVCG---TDPKL 460
L + PT + F ++ + CP +G R V TDP +
Sbjct: 216 LYPTVDPTMNATFAAALKKLCPPPASGGGGRAVSNNQVTDPNV 258
>09_06_0261 - 21919017-21920594
Length = 525
Score = 31.1 bits (67), Expect = 1.0
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = +2
Query: 602 NSAIAMVCGDATVWKPSETT--PLVAVAVTKIVEKCAAEGTTLTWWPSHS 745
+S + CG W+ E P+ V K VEK ++E T TW +H+
Sbjct: 242 SSEVFCSCGHGLCWRCGEEAHRPVSCKTVAKWVEKNSSESETATWLLAHT 291
>08_02_0811 +
21438848-21439001,21439469-21439662,21439769-21439897,
21441552-21441671,21441751-21441887,21441969-21442124,
21442565-21442943,21443041-21443157,21443225-21443371
Length = 510
Score = 31.1 bits (67), Expect = 1.0
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = +2
Query: 542 PLGVVGIITAFNFPVAVFGWNSAIAMVCGDATVWKP 649
PLGVV I FN+PV + A++ G+A V KP
Sbjct: 161 PLGVVLAIPPFNYPVNLAVSKIGPALIAGNALVLKP 196
>12_01_0721 + 6353254-6353646
Length = 130
Score = 30.7 bits (66), Expect = 1.3
Identities = 24/82 (29%), Positives = 36/82 (43%)
Frame = -2
Query: 711 SAAHFSTILVTATATSGVVSDGFQTVASPQTIAIALFHPKTATGKLKAVMMPTTPSGFHF 532
+AA ST A AT+ V + F + + + H ++AT V+ P P
Sbjct: 38 AAASGSTTTAAAAATTPVAASSFPSEEADHGKKLLHDHGESATSNSYDVV-PFQPHCC-- 94
Query: 531 SIRTCPGRLTGTQYRGVCGTDP 466
S PG+L +YR +CG P
Sbjct: 95 SNHDLPGQLRAVKYRVLCGNHP 116
>03_02_0878 +
12088119-12088233,12088511-12088608,12088689-12088795,
12088900-12088974,12089053-12089124,12089221-12089382,
12089476-12089550,12089635-12089706,12089813-12089884,
12090150-12090224,12090329-12090400,12090491-12090625,
12090712-12091187,12091270-12091779,12091876-12092111,
12092200-12092712
Length = 954
Score = 30.7 bits (66), Expect = 1.3
Identities = 18/44 (40%), Positives = 20/44 (45%)
Frame = +2
Query: 272 CGTGSVACVGGTARACKRRGR*TNRRCSKGKPSATWKASVIRNG 403
CG VA VG A +R R R G P A+WK S R G
Sbjct: 554 CGVLVVALVGAAVYALVQRRRAQKAREELGGPFASWKRSEERGG 597
>05_06_0214 -
26425100-26425922,26426008-26426058,26426183-26426256,
26426344-26426441,26426547-26426671,26426724-26426957,
26426992-26427037,26427101-26427152,26427331-26427367,
26427521-26427637,26428287-26428352,26428439-26428518,
26429102-26429311,26429650-26429739,26430093-26430182,
26430280-26430411,26430876-26431094,26431203-26431286,
26431543-26431656,26431857-26431914,26432535-26432602,
26432847-26432962,26433495-26433574,26433839-26433912
Length = 1045
Score = 30.3 bits (65), Expect = 1.8
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +2
Query: 533 KWNPLGVVGIITAFNFPVAVFGWNSAIAMVCGDATVWKPSETTPLVAVAVTKIVEKC 703
+W P G V IIT FNFP+ + A+ G+ V K +V + +++ C
Sbjct: 193 RW-PYGPVAIITPFNFPLEIPLLQLMGALYMGNKPVLKVDSKVSIVMDQMLRLLHAC 248
>03_04_0001 - 16208401-16208778
Length = 125
Score = 29.1 bits (62), Expect = 4.1
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -2
Query: 633 ASPQTIAIALFHPKTATGKLKAVMMPTTPSG 541
ASP+ +A+AL P+ ++ A PT+ SG
Sbjct: 37 ASPEAVAVALVLPRADPAEVAATAFPTSGSG 67
>08_02_0717 +
20372728-20372836,20372936-20373078,20374131-20374211,
20374307-20374510,20374789-20374796,20375153-20375245,
20375377-20375500,20375585-20375650,20375841-20375907,
20376600-20376676,20377032-20377145,20377546-20377623,
20377705-20377856,20377960-20378020,20378292-20378398,
20378497-20378562,20379099-20379177,20379671-20379967
Length = 641
Score = 28.7 bits (61), Expect = 5.4
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = +2
Query: 575 NFPVAVFGWNSAIAMVCGDATVWKPSETTPLVAVAVTKIVEKCAAEG 715
N+P+ + W A A+ G V KPSE L +V ++ + C G
Sbjct: 183 NYPLLMATWKVAPALAAGCTAVLKPSE---LASVTCLELADVCKEVG 226
>08_02_0099 +
12343518-12343678,12344193-12344393,12344669-12344846,
12347201-12347463,12347596-12347874,12348045-12349182,
12349303-12349473
Length = 796
Score = 28.7 bits (61), Expect = 5.4
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = +2
Query: 557 GIITAFNFPVA--VFGWNSAIAMVCGDATVWKPSETTPLVAVAVTKIVEKCAA 709
G+ AF PV +F S ++ A +W+ TT +VAV + +E CA+
Sbjct: 246 GVTAAFRAPVGGVLFALES-LSSWWRSALIWRSFFTTAVVAVVLRMFIELCAS 297
>02_05_1011 +
33487670-33487958,33490794-33492100,33492541-33492853,
33493190-33494247
Length = 988
Score = 28.7 bits (61), Expect = 5.4
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = +3
Query: 528 SKNGTRLVLLAS*QPSTFLWLFLDGIALSLWFVVTQLF 641
+++G +V+ + ST +W+FL + SLW F
Sbjct: 558 TESGWSMVVAVQKETSTSMWIFLQPLTTSLWLASLAFF 595
>01_06_1533 +
38041499-38041681,38041853-38041985,38042816-38042954,
38043331-38043367,38045606-38045897,38046384-38046502
Length = 300
Score = 28.7 bits (61), Expect = 5.4
Identities = 18/57 (31%), Positives = 26/57 (45%)
Frame = -2
Query: 714 PSAAHFSTILVTATATSGVVSDGFQTVASPQTIAIALFHPKTATGKLKAVMMPTTPS 544
P HFST+ TA A +G Q P ++A + P+ G A+ PT P+
Sbjct: 225 PQMFHFSTVASTAAAVTGFA----QQYGGPLSLAAS---PQAQAGMTMALTAPTLPT 274
>07_01_0355 + 2597592-2598280,2599150-2599426
Length = 321
Score = 28.3 bits (60), Expect = 7.2
Identities = 17/54 (31%), Positives = 28/54 (51%)
Frame = -2
Query: 231 SAITLPFAGL*DLITSPFAFHFPLKTPTLFSFKPKSFKNEYFGSSMRKAVDALR 70
S I+L FAG+ L+ + A F TP +K S+ +F +S+ DA++
Sbjct: 249 STISLGFAGMQVLVCTFVAVRFEGATPAEAIYKNLSYLEVFFKTSLLAVGDAVK 302
>06_01_0627 -
4567304-4567521,4567649-4567727,4567827-4568165,
4568202-4568239,4568462-4568837
Length = 349
Score = 28.3 bits (60), Expect = 7.2
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +3
Query: 546 LVLLAS*QPSTFLWLFLDGIALSLWFVVTQLFGNH 650
LVL + ST W+FL + LWF LF H
Sbjct: 89 LVLAKNESESTTKWVFLKPLTKELWFATMILFPIH 123
>04_04_1356 +
32854585-32854832,32854948-32855148,32855270-32855447,
32856389-32856651,32856800-32857040,32857317-32858456,
32858856-32858993
Length = 802
Score = 28.3 bits (60), Expect = 7.2
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +2
Query: 557 GIITAFNFPVA-VFGWNSAIAMVCGDATVWKPSETTPLVAVAVTKIVEKCAAE 712
GI AF PV V A++ A +W+ TT +VAV + +++ C ++
Sbjct: 275 GIAAAFRAPVGGVLFALEAVSSWWRSALLWRAFFTTAMVAVVLRALIDFCKSD 327
>04_03_0810 -
19902049-19902069,19902195-19902400,19902523-19902559,
19902623-19902675,19903149-19903226,19903496-19903586,
19903773-19903917,19903988-19904227,19904313-19904523,
19904788-19905232
Length = 508
Score = 28.3 bits (60), Expect = 7.2
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +2
Query: 593 FGWNSAIAMVCGDATVWKPSETT 661
FGW+ M+C D+ W SE T
Sbjct: 363 FGWSDLSKMICSDSQSWTFSEET 385
>09_01_0080 -
1168032-1168046,1168374-1168431,1168516-1168631,
1169310-1169368,1169832-1169880,1170314-1170378,
1170477-1170564,1171212-1171277
Length = 171
Score = 27.9 bits (59), Expect = 9.5
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
Frame = +2
Query: 131 GLKENNVGVF---NGKWKANGEVIKSYSPANGKVIAEVQAGS 247
GL N +F + WK E+ + S NGKVIA+V S
Sbjct: 92 GLTGTNTSMFPEVDSTWKTFREIQRLLSKTNGKVIADVMTYS 133
>01_03_0184 + 13560830-13562981,13563604-13564088
Length = 878
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/43 (32%), Positives = 26/43 (60%), Gaps = 6/43 (13%)
Frame = +1
Query: 490 VLCSRQTSRTRPDRKM-----EPAWCC-WHHNSLQLSCGCFWM 600
++C+ S T P+R + E ++ C ++H+SL +SC FW+
Sbjct: 311 MVCTLFDSDTEPERIVSIVADELSFACDFYHSSLPVSCSVFWL 353
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,338,359
Number of Sequences: 37544
Number of extensions: 499557
Number of successful extensions: 1614
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1561
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1612
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2068401984
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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