Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0092
(775 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g54100.2 68414.m06167 aldehyde dehydrogenase, putative / anti... 125 4e-29
At1g54100.1 68414.m06166 aldehyde dehydrogenase, putative / anti... 125 4e-29
At1g23800.1 68414.m03002 aldehyde dehydrogenase, mitochondrial (... 50 2e-06
At3g48000.1 68416.m05233 aldehyde dehydrogenase (ALDH2) identica... 49 4e-06
At1g79440.1 68414.m09258 succinate-semialdehyde dehydrogenase (S... 48 9e-06
At3g48170.1 68416.m05254 betaine-aldehyde dehydrogenase, putativ... 43 2e-04
At1g74920.1 68414.m08691 betaine-aldehyde dehydrogenase, putativ... 43 2e-04
At2g14170.1 68415.m01578 methylmalonate-semialdehyde dehydrogena... 43 3e-04
At1g44170.2 68414.m05102 aldehyde dehydrogenase, putative (ALDH)... 40 0.001
At1g44170.1 68414.m05101 aldehyde dehydrogenase, putative (ALDH)... 40 0.001
At3g24503.1 68416.m03074 aldehyde dehydrogenase (ALDH1a) identic... 40 0.002
At4g34240.2 68417.m04866 aldehyde dehydrogenase (ALDH3) similar ... 38 0.006
At4g34240.1 68417.m04867 aldehyde dehydrogenase (ALDH3) similar ... 38 0.006
At2g24270.2 68415.m02900 NADP-dependent glyceraldehyde-3-phospha... 31 0.64
At2g24270.1 68415.m02899 NADP-dependent glyceraldehyde-3-phospha... 31 0.64
At1g26620.1 68414.m03242 expressed protein ; expression supporte... 31 0.85
At3g19230.1 68416.m02440 leucine-rich repeat family protein cont... 31 1.1
At2g45770.1 68415.m05693 signal recognition particle receptor pr... 29 2.6
At4g36250.1 68417.m05156 aldehyde dehydrogenase family protein c... 28 6.0
At2g20110.2 68415.m02350 tesmin/TSO1-like CXC domain-containing ... 28 6.0
At2g20110.1 68415.m02349 tesmin/TSO1-like CXC domain-containing ... 28 6.0
At5g62530.1 68418.m07848 delta-1-pyrroline-5-carboxylate dehydro... 28 7.9
>At1g54100.2 68414.m06167 aldehyde dehydrogenase, putative /
antiquitin, putative strong similarity to SP|Q41247
Aldehyde dehydrogenase family 7 member A1 (EC 1.2.1.3)
(Antiquitin 1) (Brassica
turgor-responsive/drought-induced gene 26 protein)
(Btg-26) {Brassica napus}; similar to turgor-responsive
protein 26G (aldehyde dehydrogenase family 7 member A1)
[Pisum sativum] SWISS-PROT:P25795
Length = 508
Score = 125 bits (301), Expect = 4e-29
Identities = 70/201 (34%), Positives = 107/201 (53%), Gaps = 5/201 (2%)
Frame = +2
Query: 107 KYSFLKDLGLKENNVGVF-NGKWKANGEVIKSYSPANGKVIAEVQAGSAPI*--GVRQCG 277
+Y FL ++GL +N+G + GKW+ANG ++ + +PAN + IA+V S G++ C
Sbjct: 7 EYEFLSEIGLTSHNLGSYVAGKWQANGPLVSTLNPANNQPIAQVVEASLEDYEQGLKACE 66
Query: 278 TGSVACVGGTARACKRRGR*TNR--RCSKGKPSATWKASVIRNG*NPAXXXXXXXXXXXX 451
+ + TA +RG + + K + + G A
Sbjct: 67 EAAKIWMQVTA---PKRGDIVRQIGDALRSKLDYLGRLLSLEMGKILAEGIGEVQEVIDM 123
Query: 452 XXLSFGSVPHTPRYCVPVRRPGHVLIEKWNPLGVVGIITAFNFPVAVFGWNSAIAMVCGD 631
+ G +P RP H+++E WNPLG+VG+ITAFNFP AV GWN+ IA+VCG+
Sbjct: 124 CDFAVGLSRQLNGSVIPSERPNHMMLEMWNPLGIVGVITAFNFPCAVLGWNACIALVCGN 183
Query: 632 ATVWKPSETTPLVAVAVTKIV 694
VWK + TTPL+ +A+TK+V
Sbjct: 184 CVVWKGAPTTPLITIAMTKLV 204
Score = 93.1 bits (221), Expect = 2e-19
Identities = 45/69 (65%), Positives = 54/69 (78%)
Frame = +3
Query: 312 APARGEVVRQIGDALRENLQPLGKLVSLEMGKILPEAIGEVIEYIHVCDLALGLSRTLPG 491
AP RG++VRQIGDALR L LG+L+SLEMGKIL E IGEV E I +CD A+GLSR L G
Sbjct: 77 APKRGDIVRQIGDALRSKLDYLGRLLSLEMGKILAEGIGEVQEVIDMCDFAVGLSRQLNG 136
Query: 492 TVFPSDVPD 518
+V PS+ P+
Sbjct: 137 SVIPSERPN 145
>At1g54100.1 68414.m06166 aldehyde dehydrogenase, putative /
antiquitin, putative strong similarity to SP|Q41247
Aldehyde dehydrogenase family 7 member A1 (EC 1.2.1.3)
(Antiquitin 1) (Brassica
turgor-responsive/drought-induced gene 26 protein)
(Btg-26) {Brassica napus}; similar to turgor-responsive
protein 26G (aldehyde dehydrogenase family 7 member A1)
[Pisum sativum] SWISS-PROT:P25795
Length = 508
Score = 125 bits (301), Expect = 4e-29
Identities = 70/201 (34%), Positives = 107/201 (53%), Gaps = 5/201 (2%)
Frame = +2
Query: 107 KYSFLKDLGLKENNVGVF-NGKWKANGEVIKSYSPANGKVIAEVQAGSAPI*--GVRQCG 277
+Y FL ++GL +N+G + GKW+ANG ++ + +PAN + IA+V S G++ C
Sbjct: 7 EYEFLSEIGLTSHNLGSYVAGKWQANGPLVSTLNPANNQPIAQVVEASLEDYEQGLKACE 66
Query: 278 TGSVACVGGTARACKRRGR*TNR--RCSKGKPSATWKASVIRNG*NPAXXXXXXXXXXXX 451
+ + TA +RG + + K + + G A
Sbjct: 67 EAAKIWMQVTA---PKRGDIVRQIGDALRSKLDYLGRLLSLEMGKILAEGIGEVQEVIDM 123
Query: 452 XXLSFGSVPHTPRYCVPVRRPGHVLIEKWNPLGVVGIITAFNFPVAVFGWNSAIAMVCGD 631
+ G +P RP H+++E WNPLG+VG+ITAFNFP AV GWN+ IA+VCG+
Sbjct: 124 CDFAVGLSRQLNGSVIPSERPNHMMLEMWNPLGIVGVITAFNFPCAVLGWNACIALVCGN 183
Query: 632 ATVWKPSETTPLVAVAVTKIV 694
VWK + TTPL+ +A+TK+V
Sbjct: 184 CVVWKGAPTTPLITIAMTKLV 204
Score = 93.1 bits (221), Expect = 2e-19
Identities = 45/69 (65%), Positives = 54/69 (78%)
Frame = +3
Query: 312 APARGEVVRQIGDALRENLQPLGKLVSLEMGKILPEAIGEVIEYIHVCDLALGLSRTLPG 491
AP RG++VRQIGDALR L LG+L+SLEMGKIL E IGEV E I +CD A+GLSR L G
Sbjct: 77 APKRGDIVRQIGDALRSKLDYLGRLLSLEMGKILAEGIGEVQEVIDMCDFAVGLSRQLNG 136
Query: 492 TVFPSDVPD 518
+V PS+ P+
Sbjct: 137 SVIPSERPN 145
>At1g23800.1 68414.m03002 aldehyde dehydrogenase, mitochondrial
(ALDH3) nearly identical to mitochondrial aldehyde
dehydrogenase ALDH3 [Arabidopsis thaliana]
gi|19850249|gb|AAL99612; contains Pfam profile PF00171:
aldehyde dehydrogenase (NAD) family protein
Length = 534
Score = 49.6 bits (113), Expect = 2e-06
Identities = 21/53 (39%), Positives = 32/53 (60%)
Frame = +2
Query: 542 PLGVVGIITAFNFPVAVFGWNSAIAMVCGDATVWKPSETTPLVAVAVTKIVEK 700
P+GV G I +NFP+ + W A+ CG+ V K +E TPL A+ V K++ +
Sbjct: 191 PIGVAGQIIPWNFPLLMLSWKLGPALACGNTVVLKTAEQTPLSALLVGKLLHE 243
>At3g48000.1 68416.m05233 aldehyde dehydrogenase (ALDH2) identical
to aldehyde dehydrogenase [Arabidopsis thaliana]
GI:8574427; similar to mitochondrial aldehyde
dehydrogenase [Arabidopsis thaliana]
gi|19850249|gb|AAL99612; identical to cDNA aldehyde
dehydrogenase AtALDH2a GI:20530140
Length = 538
Score = 48.8 bits (111), Expect = 4e-06
Identities = 21/50 (42%), Positives = 29/50 (58%)
Frame = +2
Query: 542 PLGVVGIITAFNFPVAVFGWNSAIAMVCGDATVWKPSETTPLVAVAVTKI 691
P+GV G I +NFP+ +F W A+ CG+ V K +E TPL A K+
Sbjct: 195 PIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLTAFYAGKL 244
>At1g79440.1 68414.m09258 succinate-semialdehyde dehydrogenase
(SSADH1) similar to succinate-semialdehyde dehydrogenase
[NADP+] (SSDH) [Escherichia coli] SWISS-PROT:P25526;
identical to succinic semialdehyde dehydrogenase mRNA,
nuclear gene encoding mitochondrial protein GI:6684441;
contains TIGRfam profile TIGR01780:succinic semialdehyde
dehydrogenase; contains Pfam profile PF00171: aldehyde
dehydrogenase (NAD) family protein
Length = 528
Score = 47.6 bits (108), Expect = 9e-06
Identities = 23/50 (46%), Positives = 31/50 (62%)
Frame = +2
Query: 542 PLGVVGIITAFNFPVAVFGWNSAIAMVCGDATVWKPSETTPLVAVAVTKI 691
P+GVVG IT +NFP+A+ A+ G V KPSE TPL A+A ++
Sbjct: 188 PVGVVGAITPWNFPLAMITRKVGPALASGCTVVVKPSELTPLTALAAAEL 237
Score = 40.7 bits (91), Expect = 0.001
Identities = 24/71 (33%), Positives = 39/71 (54%)
Frame = +3
Query: 306 LPAPARGEVVRQIGDALRENLQPLGKLVSLEMGKILPEAIGEVIEYIHVCDLALGLSRTL 485
L A R +V+R+ D L + + LG+L++LE GK L EAIGEV + ++ +
Sbjct: 109 LTAGERSKVLRRWYDLLIAHKEELGQLITLEQGKPLKEAIGEVAYGASFIEYYAEEAKRV 168
Query: 486 PGTVFPSDVPD 518
G + P ++ D
Sbjct: 169 YGDIIPPNLSD 179
>At3g48170.1 68416.m05254 betaine-aldehyde dehydrogenase, putative
similar to betaine-aldehyde dehydrogenase, chloroplast
precursor (BADH) [Arabidopsis thaliana]
SWISS-PROT:Q9S795
Length = 503
Score = 43.2 bits (97), Expect = 2e-04
Identities = 21/59 (35%), Positives = 34/59 (57%)
Frame = +2
Query: 515 GHVLIEKWNPLGVVGIITAFNFPVAVFGWNSAIAMVCGDATVWKPSETTPLVAVAVTKI 691
G++L E P+GVVG+IT +N+P+ + W A ++ G + KPSE L + + I
Sbjct: 145 GYILKE---PIGVVGMITPWNYPLLMAVWKVAPSLAAGCTAILKPSELASLTCLELADI 200
>At1g74920.1 68414.m08691 betaine-aldehyde dehydrogenase, putative
identical to betaine-aldehyde dehydrogenase, chloroplast
precursor (BADH) [Arabidopsis thaliana]
SWISS-PROT:Q9S795; strong similarity to betaine aldehyde
dehydrogenase [Amaranthus hypochondriacus] GI:2388710
Length = 501
Score = 43.2 bits (97), Expect = 2e-04
Identities = 21/58 (36%), Positives = 33/58 (56%)
Frame = +2
Query: 542 PLGVVGIITAFNFPVAVFGWNSAIAMVCGDATVWKPSETTPLVAVAVTKIVEKCAAEG 715
PLGVVG+IT +N+P+ + W A ++ G + KPSE L +V ++ + C G
Sbjct: 151 PLGVVGLITPWNYPLLMAVWKVAPSLAAGCTAILKPSE---LASVTCLELADICREVG 205
>At2g14170.1 68415.m01578 methylmalonate-semialdehyde dehydrogenase,
putative similar to methylmalonate-semialdehyde
dehydrogenase [acylating], mitochondrial precursor
(MMSDH) [Rattus norvegicus] SWISS-PROT:Q02253
Length = 607
Score = 42.7 bits (96), Expect = 3e-04
Identities = 19/50 (38%), Positives = 28/50 (56%)
Frame = +2
Query: 542 PLGVVGIITAFNFPVAVFGWNSAIAMVCGDATVWKPSETTPLVAVAVTKI 691
PLGV I FNFP + W +A+ CG+ + KPSE P +V + ++
Sbjct: 249 PLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFILKPSEKDPGASVILAEL 298
>At1g44170.2 68414.m05102 aldehyde dehydrogenase, putative (ALDH)
similar to aldehyde dehydrogenase ALDH [Craterostigma
plantagineum] gi|17065918|emb|CAC84900
Length = 484
Score = 40.3 bits (90), Expect = 0.001
Identities = 21/53 (39%), Positives = 33/53 (62%)
Frame = +2
Query: 542 PLGVVGIITAFNFPVAVFGWNSAIAMVCGDATVWKPSETTPLVAVAVTKIVEK 700
PLGVV +I+A+N+P + A+ G+A V KPSE P + +TK++E+
Sbjct: 112 PLGVVLVISAWNYPFLLSIDPVIGAISAGNAVVLKPSELAPASSALLTKLLEQ 164
>At1g44170.1 68414.m05101 aldehyde dehydrogenase, putative (ALDH)
similar to aldehyde dehydrogenase ALDH [Craterostigma
plantagineum] gi|17065918|emb|CAC84900
Length = 484
Score = 40.3 bits (90), Expect = 0.001
Identities = 21/53 (39%), Positives = 33/53 (62%)
Frame = +2
Query: 542 PLGVVGIITAFNFPVAVFGWNSAIAMVCGDATVWKPSETTPLVAVAVTKIVEK 700
PLGVV +I+A+N+P + A+ G+A V KPSE P + +TK++E+
Sbjct: 112 PLGVVLVISAWNYPFLLSIDPVIGAISAGNAVVLKPSELAPASSALLTKLLEQ 164
>At3g24503.1 68416.m03074 aldehyde dehydrogenase (ALDH1a) identical
to aldehyde dehydrogenase ALDH1a [Arabidopsis thaliana]
gi|20530143|gb|AAM27004
Length = 501
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/45 (46%), Positives = 26/45 (57%)
Frame = +2
Query: 542 PLGVVGIITAFNFPVAVFGWNSAIAMVCGDATVWKPSETTPLVAV 676
P+GVVG I +NFP +F A AM G V KP+E T L A+
Sbjct: 158 PIGVVGNIIPWNFPSIMFATKVAPAMAAGCTMVVKPAEQTSLSAL 202
>At4g34240.2 68417.m04866 aldehyde dehydrogenase (ALDH3) similar to
aldehyde dehydrogenase [Arabidopsis thaliana]
gi|17065876|emb|CAC84903; contains Pfam profile PF00171:
aldehyde dehydrogenase (NAD) family protein; identical
to cDNA aldehyde dehydrogenase (ALDH3 gene) GI:17065875,
aldehyde dehydrogenase [Arabidopsis thaliana]
GI:17065876
Length = 390
Score = 38.3 bits (85), Expect = 0.006
Identities = 20/50 (40%), Positives = 29/50 (58%)
Frame = +2
Query: 542 PLGVVGIITAFNFPVAVFGWNSAIAMVCGDATVWKPSETTPLVAVAVTKI 691
PLGVV +I+A+NFP + A+ G+A V KPSE P + + K+
Sbjct: 175 PLGVVLVISAWNFPFLLSVEPVIGAIAAGNAVVLKPSEIAPAASSLLAKL 224
>At4g34240.1 68417.m04867 aldehyde dehydrogenase (ALDH3) similar to
aldehyde dehydrogenase [Arabidopsis thaliana]
gi|17065876|emb|CAC84903; contains Pfam profile PF00171:
aldehyde dehydrogenase (NAD) family protein; identical
to cDNA aldehyde dehydrogenase (ALDH3 gene) GI:17065875,
aldehyde dehydrogenase [Arabidopsis thaliana]
GI:17065876
Length = 550
Score = 38.3 bits (85), Expect = 0.006
Identities = 20/50 (40%), Positives = 29/50 (58%)
Frame = +2
Query: 542 PLGVVGIITAFNFPVAVFGWNSAIAMVCGDATVWKPSETTPLVAVAVTKI 691
PLGVV +I+A+NFP + A+ G+A V KPSE P + + K+
Sbjct: 175 PLGVVLVISAWNFPFLLSVEPVIGAIAAGNAVVLKPSEIAPAASSLLAKL 224
>At2g24270.2 68415.m02900 NADP-dependent glyceraldehyde-3-phosphate
dehydrogenase, putative similar to NADP-dependent
glyceraldehyde-3-phosphate dehydrogenase
(NON-phosphorylating glyceraldehyde 3-phosphate;
glyceraldehyde-3-phosphate dehydrogenase [NADP+])
[Nicotiana plumbaginifolia] SWISS-PROT:P93338
Length = 496
Score = 31.5 bits (68), Expect = 0.64
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = +2
Query: 542 PLGVVGIITAFNFPVAVFGWNSAIAMVCGDATVWKP 649
PLGVV I FN+PV + A A++ G++ V KP
Sbjct: 158 PLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKP 193
>At2g24270.1 68415.m02899 NADP-dependent glyceraldehyde-3-phosphate
dehydrogenase, putative similar to NADP-dependent
glyceraldehyde-3-phosphate dehydrogenase
(NON-phosphorylating glyceraldehyde 3-phosphate;
glyceraldehyde-3-phosphate dehydrogenase [NADP+])
[Nicotiana plumbaginifolia] SWISS-PROT:P93338
Length = 496
Score = 31.5 bits (68), Expect = 0.64
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = +2
Query: 542 PLGVVGIITAFNFPVAVFGWNSAIAMVCGDATVWKP 649
PLGVV I FN+PV + A A++ G++ V KP
Sbjct: 158 PLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKP 193
>At1g26620.1 68414.m03242 expressed protein ; expression supported
by MPSS
Length = 867
Score = 31.1 bits (67), Expect = 0.85
Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 1/90 (1%)
Frame = -1
Query: 643 PNSCVTTNHSDSAIPSKNSHRKVEGCYDANNTKRVPFFDQDVSGTSDGNTVPGSVRD-RP 467
P S TT+HS + +HR++E + T +V +D V +S +T P SV D RP
Sbjct: 256 PQSYPTTDHSKVKFSGERAHRELE---VRSKTPQVS-YDSYVE-SSVASTAPRSVNDYRP 310
Query: 466 KAKSHT*IYSITSPIASGRILPISNDTSFP 377
+ +T +SGR + SN S+P
Sbjct: 311 EF-----FKPLTHWSSSGRTMTSSNQKSYP 335
>At3g19230.1 68416.m02440 leucine-rich repeat family protein
contains Pfam profile:PF00560 LRR:Leucine Rich Repeat
domains; similar to light repressible receptor protein
kinase (GI:1321686)[Arabidopsis thaliana]
Length = 519
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = +2
Query: 86 AFLIEDPKYSFLKDLGLKENNVGVFNGKWKANGEVIKSYSPA 211
AF + SFL+ L + N V V++G+W +G+ + +PA
Sbjct: 289 AFDVSVNGLSFLRKLNVSTNGVMVYSGQWPLSGQTQITLTPA 330
>At2g45770.1 68415.m05693 signal recognition particle receptor
protein, chloroplast (FTSY) similar to Cell division
protein ftsY homolog (SP:O67066) {Aquifex aeolicus};
contains Pfam PF00448: SRP54-type protein, GTPase domain
contains TIGRFAM TIGR00064: signal recognition
particle-docking protein FtsY contains Pfam PF02881:
SRP54-type protein, helical bundle domain; identical to
cDNA chloroplast FtsY homolog GI:4583547
Length = 366
Score = 29.5 bits (63), Expect = 2.6
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -3
Query: 314 RGQFRPRMPRFLCRTG 267
RG+FRPRM RF C G
Sbjct: 29 RGEFRPRMTRFRCSAG 44
>At4g36250.1 68417.m05156 aldehyde dehydrogenase family protein
contais aldehyde dehydrogenase (NADP) family protein
domain, Pfam:PF00171
Length = 484
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/51 (25%), Positives = 28/51 (54%)
Frame = +2
Query: 542 PLGVVGIITAFNFPVAVFGWNSAIAMVCGDATVWKPSETTPLVAVAVTKIV 694
P G V +++++NFP+++ A+ G+ + K SE +P + + K +
Sbjct: 108 PYGTVLVLSSWNFPISLSLDPLIGAIAAGNTVLLKSSELSPNASAFLAKTI 158
>At2g20110.2 68415.m02350 tesmin/TSO1-like CXC domain-containing
protein similar to SP|Q9WTJ6 Tesmin
(Metallothionein-like 5, testis-specific) {Mus
musculus}; contains Pfam profile PF03638:
Tesmin/TSO1-like CXC domain
Length = 578
Score = 28.3 bits (60), Expect = 6.0
Identities = 20/63 (31%), Positives = 23/63 (36%), Gaps = 1/63 (1%)
Frame = +1
Query: 484 SPVLCSRQTSRTRPDRKMEPAWC-CWHHNSLQLSCGCFWME*RYRYGLW*RNCLETIRNN 660
SP R TR + C C H L+L C CF Y G NC + N
Sbjct: 99 SPNSMPRPAGETRDGTPQKKKQCNCKHSRCLKLYCECF-ASGTYCDGCNCVNCFNNVENE 157
Query: 661 TAR 669
AR
Sbjct: 158 PAR 160
>At2g20110.1 68415.m02349 tesmin/TSO1-like CXC domain-containing
protein similar to SP|Q9WTJ6 Tesmin
(Metallothionein-like 5, testis-specific) {Mus
musculus}; contains Pfam profile PF03638:
Tesmin/TSO1-like CXC domain
Length = 571
Score = 28.3 bits (60), Expect = 6.0
Identities = 20/63 (31%), Positives = 23/63 (36%), Gaps = 1/63 (1%)
Frame = +1
Query: 484 SPVLCSRQTSRTRPDRKMEPAWC-CWHHNSLQLSCGCFWME*RYRYGLW*RNCLETIRNN 660
SP R TR + C C H L+L C CF Y G NC + N
Sbjct: 99 SPNSMPRPAGETRDGTPQKKKQCNCKHSRCLKLYCECF-ASGTYCDGCNCVNCFNNVENE 157
Query: 661 TAR 669
AR
Sbjct: 158 PAR 160
>At5g62530.1 68418.m07848 delta-1-pyrroline-5-carboxylate
dehydrogenase (P5CDH) identical to
delta-1-pyrroline-5-carboxylate dehydrogenase precursor
[Arabidopsis thaliana] gi|15383744|gb|AAK73756;
identical to cDNA delta-1-pyrroline-5-carboxylate
dehydrogenase precursor (P5CDH) nuclear gene for
mitochondrial product GI:15383743; contains Pfam profile
PF00171:aldehyde dehydrogenase (NAD) family protein
Length = 556
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/57 (26%), Positives = 27/57 (47%)
Frame = +2
Query: 533 KWNPLGVVGIITAFNFPVAVFGWNSAIAMVCGDATVWKPSETTPLVAVAVTKIVEKC 703
+W P G V I+T FNFP+ + A+ G+ + K +V + +++ C
Sbjct: 194 RW-PYGPVTIVTPFNFPLEIPLLQLMGALYMGNKPLLKVDSKVSIVMEQMMRLLHYC 249
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,609,125
Number of Sequences: 28952
Number of extensions: 387018
Number of successful extensions: 1086
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1037
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1082
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1726528800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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