Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0091
(776 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC61.01c |str2|str1, SPCC622.20c|siderophore-iron transporter ... 30 0.43
SPAC17A5.04c |mde10|mug139|spore wall assembly peptidase Mde10|S... 29 0.56
SPCC736.14 |dis1||microtubule-associated protein Dis1 |Schizosac... 27 2.3
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 27 3.0
SPBC21D10.07 |||UPF0287 family protein|Schizosaccharomyces pombe... 27 4.0
SPBC32H8.01c ||SPBP22H7.10c|conserved fungal protein|Schizosacch... 27 4.0
SPAC4H3.01 |||DNAJ domain protein Caj1/Djp1 type|Schizosaccharom... 26 5.2
SPBC21D10.06c |map4||cell agglutination protein Map4|Schizosacch... 26 6.9
SPBC577.14c |spa1|spa|ornithine decarboxylase antizyme Spa1|Schi... 26 6.9
SPBC19F5.03 |||inositol polyphosphate phosphatase |Schizosacchar... 25 9.2
SPBC12C2.10c |pst1|SPBC21D10.01c|Clr6 histone deacetylase comple... 25 9.2
>SPCC61.01c |str2|str1, SPCC622.20c|siderophore-iron transporter
Str2 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 597
Score = 29.9 bits (64), Expect = 0.43
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +2
Query: 71 GWDATIWLTRSQLGGPSGFAPVGGVCTKTRSAAIDRD 181
G + T++LT S +GG G A GGV +K S+ + D
Sbjct: 480 GMNLTLYLTFSSVGGAFGSAIAGGVWSKRLSSRLLHD 516
>SPAC17A5.04c |mde10|mug139|spore wall assembly peptidase
Mde10|Schizosaccharomyces pombe|chr 1|||Manual
Length = 512
Score = 29.5 bits (63), Expect = 0.56
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = +2
Query: 203 VIAHELAHLLGLTHD 247
V+AHE+ H+LGL HD
Sbjct: 226 VVAHEIGHILGLIHD 240
>SPCC736.14 |dis1||microtubule-associated protein Dis1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 882
Score = 27.5 bits (58), Expect = 2.3
Identities = 25/83 (30%), Positives = 35/83 (42%), Gaps = 3/83 (3%)
Frame = -3
Query: 291 HYRASKRFRLT-IASPSWVNPNK*ASSCAITKALV--NPSSRSMAADRVLVQTPPTGANP 121
H R RL +ASP +P K A + L NPS S+ + + ++ PT +
Sbjct: 537 HPNQPSRPRLPRVASPLKTSPVKLAVTPQAPSPLPSSNPSQASLTEESLSTRSSPTKPST 596
Query: 120 EGPPSWDLVNHIVASHPVLPSGS 52
S LVN +S PS S
Sbjct: 597 TSLRSQSLVNRFASSTLKAPSSS 619
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 27.1 bits (57), Expect = 3.0
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +2
Query: 605 LWTKPMVRGSCSAXRCL 655
+WT+PM+R C RCL
Sbjct: 1167 VWTRPMIRLFCLVWRCL 1183
>SPBC21D10.07 |||UPF0287 family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 104
Score = 26.6 bits (56), Expect = 4.0
Identities = 9/40 (22%), Positives = 24/40 (60%)
Frame = +3
Query: 408 VELGGAKELSNYVFTMDEQCRTEFGEGFSVCRSVRFGLRA 527
+++ K+ ++ + ++E C FG+ F C ++++ L+A
Sbjct: 5 LDVNNQKQCADLIRALEE-CHKSFGKFFGECNTIKYELKA 43
>SPBC32H8.01c ||SPBP22H7.10c|conserved fungal
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 187
Score = 26.6 bits (56), Expect = 4.0
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -2
Query: 583 ARFEPAHVRHSAVGTPQP*ARRPNLTDRHTEK 488
A+ E +V A G PQ + PNL + TEK
Sbjct: 81 AKDESKNVEKDATGNPQESKQEPNLEVQQTEK 112
>SPAC4H3.01 |||DNAJ domain protein Caj1/Djp1
type|Schizosaccharomyces pombe|chr 1|||Manual
Length = 392
Score = 26.2 bits (55), Expect = 5.2
Identities = 12/52 (23%), Positives = 26/52 (50%)
Frame = -1
Query: 242 GSTLISERARVQLQKHWSILRRGRWRLTAFWCRPHLRGRILKALQAGISSTI 87
G ++ V QK ++L+ ++ + FW R +G+I +A +S+ +
Sbjct: 221 GVEILHAIGEVYTQKGRTVLKSSKFGIGGFWSRMKEKGKIARATWDTVSAAM 272
>SPBC21D10.06c |map4||cell agglutination protein
Map4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 948
Score = 25.8 bits (54), Expect = 6.9
Identities = 12/46 (26%), Positives = 19/46 (41%)
Frame = -3
Query: 258 IASPSWVNPNK*ASSCAITKALVNPSSRSMAADRVLVQTPPTGANP 121
I +PSWV + S T + P + + V TP ++P
Sbjct: 757 IPTPSWVTETVTSGSVGFTTTIATPVGTTAGTVLIDVPTPTASSSP 802
>SPBC577.14c |spa1|spa|ornithine decarboxylase antizyme
Spa1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 226
Score = 25.8 bits (54), Expect = 6.9
Identities = 11/36 (30%), Positives = 17/36 (47%)
Frame = +3
Query: 600 TPCGQNQWCVDRVLRXDAWATVKETKG*KTKHTPEW 707
TP G +WC + + R A K+ + +H P W
Sbjct: 58 TPAGGAEWCSEALERSRPRAAFKQQ---RRRHVPRW 90
>SPBC19F5.03 |||inositol polyphosphate phosphatase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 598
Score = 25.4 bits (53), Expect = 9.2
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -1
Query: 380 HHHFFDFA*NCSFEQLDQAKL 318
H+H+FDF CS + D+ L
Sbjct: 323 HYHYFDFHKECSHMRWDRVSL 343
>SPBC12C2.10c |pst1|SPBC21D10.01c|Clr6 histone deacetylase complex
subunit Pst1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1522
Score = 25.4 bits (53), Expect = 9.2
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -3
Query: 156 VLVQTPPTGANPEGPPSWDLVNHI 85
+ Q PP NP+GPP + L N I
Sbjct: 46 LFTQAPPH-TNPQGPPPFPLFNSI 68
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,506,244
Number of Sequences: 5004
Number of extensions: 76383
Number of successful extensions: 214
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 195
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 214
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 375345278
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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