Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0091
         (776 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0490 + 4284192-4284740                                           31   0.77 
08_02_0455 - 17344362-17344418,17344480-17344623,17344693-17344836     31   1.3  
08_01_0704 + 6219530-6219609,6221595-6222243,6222339-6222437,622...    31   1.3  
06_03_0696 + 23617687-23617851,23618838-23619536                       31   1.3  
02_05_0870 - 32354117-32354416                                         30   1.8  
12_02_0167 - 14824241-14824279,14824385-14824423,14824509-148247...    29   3.1  
08_02_0363 + 16238710-16240224,16240537-16240545                       29   4.1  
02_05_0418 + 28807763-28807777,28809216-28809242,28809588-288096...    29   5.4  
02_01_0386 + 2799022-2799293,2801419-2803000,2803351-2803404           29   5.4  
02_05_0198 + 26657117-26657282,26657392-26657504,26657645-266578...    28   7.2  
02_05_0428 + 28912746-28912971,28914132-28914301,28914462-289145...    28   9.5  

>08_01_0490 + 4284192-4284740
          Length = 182

 Score = 31.5 bits (68), Expect = 0.77
 Identities = 27/86 (31%), Positives = 35/86 (40%), Gaps = 4/86 (4%)
 Frame = -2

Query: 724 PPQIS--PHSGVCLVFQPLVSLTVAQASXRRTRSTHHWFCPQGVPSRGGARFEPAH--VR 557
           PP+    PH    L+ QP V L  A     +    HH   PQ  P  GG    PA   V 
Sbjct: 43  PPETGGGPHHNAILLRQPPVMLAAAAGIPEQGSGPHHNAVPQWKPRGGGELRLPASPPVI 102

Query: 556 HSAVGTPQP*ARRPNLTDRHTEKPSP 479
            +A GT  P     + T+    +P+P
Sbjct: 103 LAAAGT-TPERGNGSKTNAVLRRPTP 127


>08_02_0455 - 17344362-17344418,17344480-17344623,17344693-17344836
          Length = 114

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = -2

Query: 598 PSRGGARFEPAHVRHSAV-GTPQP*ARRPNLTDRHTE 491
           PS  G   +P   R S+  GTP+P   RPN TD  T+
Sbjct: 7   PSMYGGTLQPWLCRRSSTTGTPRPSITRPNATDHFTK 43


>08_01_0704 +
           6219530-6219609,6221595-6222243,6222339-6222437,
           6222521-6222616,6222750-6222848,6222929-6223027,
           6223811-6223882,6224508-6224597,6225173-6227329
          Length = 1146

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
 Frame = +2

Query: 95  TRSQLGGPSGFAP--VGGVCTKTRSAAIDRDEGLTS 196
           TRS+L G +G     VG +C+KTRS  + R+  L S
Sbjct: 84  TRSELAGANGVVDSNVGDLCSKTRSGLVRRNATLDS 119


>06_03_0696 + 23617687-23617851,23618838-23619536
          Length = 287

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 1/86 (1%)
 Frame = -3

Query: 312 GSQYCRCHYRASKRF-RLTIASPSWVNPNK*ASSCAITKALVNPSSRSMAADRVLVQTPP 136
           G  +CR    AS     +++ASP WVN +   +  +I + +   +  +M    ++ QTPP
Sbjct: 24  GPPHCRLTAEASSVLPNMSVASP-WVNDDD-LTEISIYEVIAWSAEEAM---ELIKQTPP 78

Query: 135 TGANPEGPPSWDLVNHIVASHPVLPS 58
               P  PPS     H V   P  PS
Sbjct: 79  PPPPPPPPPS-PPATHDVGQPPPPPS 103


>02_05_0870 - 32354117-32354416
          Length = 99

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
 Frame = -3

Query: 138 PTGANPEGPPSWDLVNHIVASHPV-LPSGSFM 46
           P G +P G P  D +  + A+HP+ LP+ SF+
Sbjct: 68  PHGTSPPGLPLGDKIQQLQATHPLQLPTSSFL 99


>12_02_0167 -
           14824241-14824279,14824385-14824423,14824509-14824797,
           14824898-14824991,14825129-14825639,14825751-14826014,
           14826103-14826549,14826628-14826801,14827003-14827323
          Length = 725

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 16/43 (37%), Positives = 21/43 (48%)
 Frame = -3

Query: 261 TIASPSWVNPNK*ASSCAITKALVNPSSRSMAADRVLVQTPPT 133
           T+A     +P K  SSCA T+   NP+S   A D +   T  T
Sbjct: 278 TVAHEELGSPTKKRSSCASTELAENPTSVDSAVDHITEPTSCT 320


>08_02_0363 + 16238710-16240224,16240537-16240545
          Length = 507

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 15/44 (34%), Positives = 24/44 (54%)
 Frame = +3

Query: 390 AYTDEGVELGGAKELSNYVFTMDEQCRTEFGEGFSVCRSVRFGL 521
           A T E VEL   + +++++   DE C T+F    ++C  V F L
Sbjct: 397 ACTKEDVELLARRRVTDHLMRNDEDCATKFA---ALCDGVNFNL 437


>02_05_0418 +
           28807763-28807777,28809216-28809242,28809588-28809621,
           28809909-28810154,28810518-28810948,28812759-28813418
          Length = 470

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 16/44 (36%), Positives = 19/44 (43%)
 Frame = -2

Query: 610 PQGVPSRGGARFEPAHVRHSAVGTPQP*ARRPNLTDRHTEKPSP 479
           P+ VP RGGA    A    +A G   P    P    R  +KP P
Sbjct: 355 PKPVPRRGGAPRGKAWESFAAAGKEPPPKHVPRWLPRFPDKPEP 398


>02_01_0386 + 2799022-2799293,2801419-2803000,2803351-2803404
          Length = 635

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 21/77 (27%), Positives = 30/77 (38%)
 Frame = +1

Query: 145 LHQNAVSRHRPRRRIDQCFCNCTRARSLIRVDPRWRSNCQSEALRGSVMAPTVLATLHNF 324
           L Q  +SR  PR  I      C R   L R D  WR  CQ+     +      +A   + 
Sbjct: 219 LCQKILSRLSPRD-IASVNSVCKRLYHLTRNDDLWRMVCQNAWGSEATQVLETVAGTRSL 277

Query: 325 AWSSCSKEQFHAKSKKW 375
           AW   ++E    ++  W
Sbjct: 278 AWGRLARELTTLEAVTW 294


>02_05_0198 +
           26657117-26657282,26657392-26657504,26657645-26657838,
           26658133-26658481
          Length = 273

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 19/56 (33%), Positives = 21/56 (37%)
 Frame = -3

Query: 264 LTIASPSWVNPNK*ASSCAITKALVNPSSRSMAADRVLVQTPPTGANPEGPPSWDL 97
           +   SPS     K   SC   K   NPS        VL    P GA  E P  +DL
Sbjct: 74  IAAGSPSIYESGKGCGSCYQVKCSGNPSCSGKPVTVVLTDLCPGGACLEEPVHFDL 129


>02_05_0428 +
           28912746-28912971,28914132-28914301,28914462-28914566,
           28915059-28915262,28915404-28915506,28915607-28915719
          Length = 306

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = -3

Query: 555 IARWAHHNLEHADRTLRIDTLRNLLRI 475
           I  W H NLE ++ +L+ D L  L RI
Sbjct: 184 IVTWCHRNLEPSEESLKPDELNLLKRI 210


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,446,155
Number of Sequences: 37544
Number of extensions: 619834
Number of successful extensions: 1853
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1732
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1852
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2080154268
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)