Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0091
(776 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_13625| Best HMM Match : Reprolysin (HMM E-Value=2.3e-15) 56 3e-08
SB_12784| Best HMM Match : ADAM_spacer1 (HMM E-Value=1.4e-23) 56 3e-08
SB_19793| Best HMM Match : TSP_1 (HMM E-Value=0.0027) 52 4e-07
SB_13504| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 1e-05
SB_41907| Best HMM Match : Reprolysin (HMM E-Value=9.2e-05) 47 2e-05
SB_11766| Best HMM Match : Reprolysin (HMM E-Value=1.6e-08) 43 2e-04
SB_48915| Best HMM Match : Pep_M12B_propep (HMM E-Value=0.0031) 39 0.004
SB_42957| Best HMM Match : TSP_1 (HMM E-Value=6.1e-13) 38 0.009
SB_53432| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.028
SB_48913| Best HMM Match : TSP_1 (HMM E-Value=1.8e-11) 36 0.028
SB_25711| Best HMM Match : Oxidored_q1_N (HMM E-Value=3) 36 0.037
SB_32444| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.084
SB_41816| Best HMM Match : Peptidase_M10 (HMM E-Value=0) 33 0.34
SB_52826| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.60
SB_16411| Best HMM Match : DUF791 (HMM E-Value=0) 31 0.79
SB_6680| Best HMM Match : Astacin (HMM E-Value=0) 31 0.79
SB_28272| Best HMM Match : EGF (HMM E-Value=2.6e-15) 31 1.0
SB_37171| Best HMM Match : EGF (HMM E-Value=2.6e-15) 31 1.0
SB_55049| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.4
SB_29939| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.4
SB_39229| Best HMM Match : Phage_holin_1 (HMM E-Value=3.5) 29 5.5
SB_38592| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_11665| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_22107| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.7
>SB_13625| Best HMM Match : Reprolysin (HMM E-Value=2.3e-15)
Length = 715
Score = 56.0 bits (129), Expect = 3e-08
Identities = 22/47 (46%), Positives = 31/47 (65%)
Frame = +2
Query: 113 GPSGFAPVGGVCTKTRSAAIDRDEGLTSAFVIAHELAHLLGLTHDGE 253
G G A V G+CT T+S ++ D GL+ A+ IAHE+ H G+ HDG+
Sbjct: 307 GTLGLAQVNGMCTSTKSCNVNEDSGLSVAYTIAHEIGHNFGMLHDGD 353
Score = 36.7 bits (81), Expect = 0.021
Identities = 19/65 (29%), Positives = 28/65 (43%)
Frame = +3
Query: 432 LSNYVFTMDEQCRTEFGEGFSVCRSVRFGLRAQGCGVPTALCLTCAGSKRAPPLEGTPCG 611
L V+ D QCR ++G S C + + CG SK +GT CG
Sbjct: 400 LPGTVYDADHQCRLQYGSNSSQCTGM-----SDPCGTLWCKVGKACQSKLEQAADGTYCG 454
Query: 612 QNQWC 626
+++WC
Sbjct: 455 KDKWC 459
>SB_12784| Best HMM Match : ADAM_spacer1 (HMM E-Value=1.4e-23)
Length = 571
Score = 56.0 bits (129), Expect = 3e-08
Identities = 33/88 (37%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Frame = +2
Query: 8 SLEAINKWNYRHLMKLPEGSTGWDATIWLTRSQLGGPSG------FAPVGGVCTKTRSAA 169
SL + KW + E +D I LTR+ + +G A +G VC +RS +
Sbjct: 68 SLRSFCKWQTKMNKPSDEEPGHFDTAILLTRTDICRAAGKCDTLGLAELGTVCNPSRSCS 127
Query: 170 IDRDEGLTSAFVIAHELAHLLGLTHDGE 253
I GL+SAF IAHELAH+ + HDG+
Sbjct: 128 IVEVTGLSSAFTIAHELAHVFNVPHDGD 155
>SB_19793| Best HMM Match : TSP_1 (HMM E-Value=0.0027)
Length = 384
Score = 52.4 bits (120), Expect = 4e-07
Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Frame = +3
Query: 447 FTMDEQCRTEFGEGFSVCRSVRFGLRAQGCGVPTALCL---TCAGSKRAPPLEGTPCGQN 617
F DEQCR +G+ + +C SV G CG T C+ +C ++ PP++GTPCG
Sbjct: 51 FDGDEQCRIVYGQEYKLC-SVTTG----NCG--TLFCMRGSSCVNTRGMPPVDGTPCGHR 103
Query: 618 QWCV 629
+WC+
Sbjct: 104 KWCI 107
>SB_13504| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4924
Score = 47.6 bits (108), Expect = 1e-05
Identities = 27/88 (30%), Positives = 41/88 (46%), Gaps = 7/88 (7%)
Frame = +2
Query: 8 SLEAINKWNYRHLMKLPEGSTGWDATIWLTR-------SQLGGPSGFAPVGGVCTKTRSA 166
+LE+ KW R+ L +D TR +Q G A G+C+ SA
Sbjct: 836 TLESFGKWAERNNNPLDNDENHYDYATLFTRYNICKDKNQPCDTLGLARTRGMCSFPSSA 895
Query: 167 AIDRDEGLTSAFVIAHELAHLLGLTHDG 250
++++D GL +AHE H +G+ HDG
Sbjct: 896 SVNQDNGLMLGMTLAHETGHSMGINHDG 923
Score = 28.3 bits (60), Expect = 7.3
Identities = 17/66 (25%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
Frame = +3
Query: 444 VFTMDEQCRTEFGEGFSVCRSVRFGLRA---QGCGVP--TALCLTCAGSKRAPPLEGTPC 608
++ D+QC+ +G+ C +F + C VP + C T + P +GT C
Sbjct: 987 LYDKDQQCQLAYGQEAKFCSGAKFLDQVCVKLWCEVPAGSGQCKTA----QVPATDGTSC 1042
Query: 609 GQNQWC 626
G+ + C
Sbjct: 1043 GEGKSC 1048
>SB_41907| Best HMM Match : Reprolysin (HMM E-Value=9.2e-05)
Length = 656
Score = 46.8 bits (106), Expect = 2e-05
Identities = 21/66 (31%), Positives = 33/66 (50%)
Frame = +3
Query: 432 LSNYVFTMDEQCRTEFGEGFSVCRSVRFGLRAQGCGVPTALCLTCAGSKRAPPLEGTPCG 611
L V+ QCR ++G G+ C+ ++ + C C+ S RAPP++GT CG
Sbjct: 476 LPGQVYDAATQCRMQYGPGYYHCKQLQSNCGSLFCSRNGVQCV----SFRAPPMDGTRCG 531
Query: 612 QNQWCV 629
WC+
Sbjct: 532 VRHWCI 537
Score = 39.1 bits (87), Expect = 0.004
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = +2
Query: 110 GGPSGFAPVGGVCTKTRSAAIDRDEGLTSAFVIAHELAHLLGLTHDG 250
G G A CT ++ GL +A +I HE+ H LG+ HDG
Sbjct: 311 GTRGGLAQAASTCTTQFGRTVNSYVGLGTALLITHEIGHTLGVRHDG 357
>SB_11766| Best HMM Match : Reprolysin (HMM E-Value=1.6e-08)
Length = 469
Score = 43.2 bits (97), Expect = 2e-04
Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 5/84 (5%)
Frame = +2
Query: 11 LEAINKWNYRHLMKLPEGSTG-WDATIWLTRSQLGGPS----GFAPVGGVCTKTRSAAID 175
L +KW+ + P G+ G +D + LTR G G G C+ A+I+
Sbjct: 264 LSVFSKWS--QTVNTPAGNAGHFDHAVLLTRDICGMKECQLDGLTYFGSPCSNRLGASIN 321
Query: 176 RDEGLTSAFVIAHELAHLLGLTHD 247
GL +AF + H +AH G+ HD
Sbjct: 322 NAYGLAAAFSVVHHMAHNFGVEHD 345
Score = 33.5 bits (73), Expect = 0.20
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +3
Query: 564 CAGSKRAPPLEGTPCGQNQWCVDRV 638
C + P++GTPCG +WC+ +
Sbjct: 401 CINPRNILPVDGTPCGNRKWCISGI 425
>SB_48915| Best HMM Match : Pep_M12B_propep (HMM E-Value=0.0031)
Length = 511
Score = 39.1 bits (87), Expect = 0.004
Identities = 19/54 (35%), Positives = 29/54 (53%)
Frame = +2
Query: 74 WDATIWLTRSQLGGPSGFAPVGGVCTKTRSAAIDRDEGLTSAFVIAHELAHLLG 235
+DA ++ R P G A + +C + ++ D GL +A +IAHEL H LG
Sbjct: 345 FDALVFNARGS--DPGGLAQMSAICVGAIAPSMSNDIGLQTAMIIAHELGHGLG 396
>SB_42957| Best HMM Match : TSP_1 (HMM E-Value=6.1e-13)
Length = 649
Score = 37.9 bits (84), Expect = 0.009
Identities = 17/36 (47%), Positives = 24/36 (66%)
Frame = +2
Query: 119 SGFAPVGGVCTKTRSAAIDRDEGLTSAFVIAHELAH 226
+G A G C SA+++ D+GL +AF IAHE+AH
Sbjct: 289 NGLAFCGYSCESRYSASVNDDQGLQTAFSIAHEMAH 324
>SB_53432| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 82
Score = 36.3 bits (80), Expect = 0.028
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +2
Query: 128 APVGGVCTKTRSAAIDRDEGLTSAFVIAHELAHLLGLTHDG 250
A G C A+ + G+ ++ ++AHE+AH LG+ HDG
Sbjct: 3 ASAGSTCGSL-GKALAGNSGIQASIIVAHEIAHTLGVGHDG 42
>SB_48913| Best HMM Match : TSP_1 (HMM E-Value=1.8e-11)
Length = 1068
Score = 36.3 bits (80), Expect = 0.028
Identities = 22/89 (24%), Positives = 39/89 (43%), Gaps = 5/89 (5%)
Frame = +3
Query: 429 ELSNYVFTMDEQCRTEFGEGFSVCRSVRFGLRAQGCGVPTALCLTCAGSKRAPPLEGTPC 608
+L ++ ++QC+ ++G ++ C + + C + TC + AP L+GT C
Sbjct: 291 KLPGQIYDRNKQCQMQYGSAYTECAQKKSSCDSLFCSSDGS---TCPSTVLAP-LDGTSC 346
Query: 609 GQNQWCVDRVLRXDA-----WATVKETKG 680
G Q C + D W T +T G
Sbjct: 347 GDRQVCKSYINASDTNTDPRWGTPIKTDG 375
>SB_25711| Best HMM Match : Oxidored_q1_N (HMM E-Value=3)
Length = 166
Score = 35.9 bits (79), Expect = 0.037
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +2
Query: 128 APVGGVCTKTRSAAIDRDEGLTSAFVIAHELAHLLGLTHDG 250
A CT ++ GL +A +I HE+ H LG+ HDG
Sbjct: 3 AQAASTCTTQFGRTVNSYVGLGTALLITHEIGHTLGVRHDG 43
>SB_32444| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 836
Score = 34.7 bits (76), Expect = 0.084
Identities = 18/68 (26%), Positives = 31/68 (45%)
Frame = +3
Query: 426 KELSNYVFTMDEQCRTEFGEGFSVCRSVRFGLRAQGCGVPTALCLTCAGSKRAPPLEGTP 605
++L ++ D QC+ +G + C+ G TC S+ +PP++GT
Sbjct: 411 RKLPGQIYNRDVQCKLNYGPEYKHCKQKL----DNGA--------TCV-SRVSPPVDGTK 457
Query: 606 CGQNQWCV 629
CG WC+
Sbjct: 458 CGDRHWCI 465
Score = 30.7 bits (66), Expect = 1.4
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +2
Query: 179 DEGLTSAFVIAHELAHLLGLTHDG 250
D GL ++ + HE+AH +G HDG
Sbjct: 328 DVGLGTSQALTHEIAHTMGAVHDG 351
>SB_41816| Best HMM Match : Peptidase_M10 (HMM E-Value=0)
Length = 556
Score = 32.7 bits (71), Expect = 0.34
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = +2
Query: 176 RDEGLTSAFVIAHELAHLLGLTH 244
+D G+ FV AHEL H LGL+H
Sbjct: 184 KDAGVNLLFVAAHELGHTLGLSH 206
>SB_52826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2126
Score = 31.9 bits (69), Expect = 0.60
Identities = 18/39 (46%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +3
Query: 510 RFGLRAQGCGVPTALCLTCAGSKRAPPLEG-TPCGQNQW 623
RF RA G G LC T + RAPPLEG G+ W
Sbjct: 1421 RFKPRAAGRGEKRKLCKTMSLPTRAPPLEGDVSPGEQAW 1459
>SB_16411| Best HMM Match : DUF791 (HMM E-Value=0)
Length = 445
Score = 31.5 bits (68), Expect = 0.79
Identities = 17/57 (29%), Positives = 28/57 (49%)
Frame = +1
Query: 139 WGLHQNAVSRHRPRRRIDQCFCNCTRARSLIRVDPRWRSNCQSEALRGSVMAPTVLA 309
W ++++ S P + + F T SLI V + +NC +E L +AP V+A
Sbjct: 148 WYVYEHTQSNDFPVEWVSETFSKATLFNSLISVVAGFLANCAAEWLNFGPVAPYVMA 204
>SB_6680| Best HMM Match : Astacin (HMM E-Value=0)
Length = 637
Score = 31.5 bits (68), Expect = 0.79
Identities = 25/82 (30%), Positives = 35/82 (42%)
Frame = +2
Query: 2 EKSLEAINKWNYRHLMKLPEGSTGWDATIWLTRSQLGGPSGFAPVGGVCTKTRSAAIDRD 181
+K +A+ W R +K E +T D + G S VGG T +
Sbjct: 107 KKIEQAMEGWERRTCIKFKERTTETDYVMLYFGP--GCQSDVGRVGGFQTTSLG------ 158
Query: 182 EGLTSAFVIAHELAHLLGLTHD 247
EG +I HEL HL+GL H+
Sbjct: 159 EGCNDYGIITHELGHLIGLYHE 180
>SB_28272| Best HMM Match : EGF (HMM E-Value=2.6e-15)
Length = 157
Score = 31.1 bits (67), Expect = 1.0
Identities = 16/48 (33%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
Frame = +3
Query: 495 VCRSVRFGLRAQGCGVPTALCL-TCAGSKRAPPLEGTPCGQNQWCVDR 635
+CR V F C P TCA S R P + +PC N C ++
Sbjct: 48 ICR-VNFENNTHRCECPKESSSGTCANSARVKPCDSSPCQNNATCTNK 94
>SB_37171| Best HMM Match : EGF (HMM E-Value=2.6e-15)
Length = 186
Score = 31.1 bits (67), Expect = 1.0
Identities = 16/48 (33%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
Frame = +3
Query: 495 VCRSVRFGLRAQGCGVPTALCL-TCAGSKRAPPLEGTPCGQNQWCVDR 635
+CR V F C P TCA S R P + +PC N C ++
Sbjct: 48 ICR-VNFENNTHRCECPKESSSGTCANSARVKPCDSSPCQNNATCTNK 94
>SB_55049| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 44
Score = 29.9 bits (64), Expect = 2.4
Identities = 10/16 (62%), Positives = 14/16 (87%)
Frame = +3
Query: 573 SKRAPPLEGTPCGQNQ 620
++R PPLEGT CG+N+
Sbjct: 22 TRRTPPLEGTSCGRNK 37
>SB_29939| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1122
Score = 29.9 bits (64), Expect = 2.4
Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
Frame = +2
Query: 110 GGPSGFAPVGGVCTKTRSAAIDR--DEGLTS-AFVIAHELAHLLGLTHD 247
GG G A V +CT SA ++R G+ V+AHE+ H G HD
Sbjct: 192 GGVIGMAWVRSMCTGN-SAGVNRWSMSGIVGPVVVVAHEMGHNFGFGHD 239
>SB_39229| Best HMM Match : Phage_holin_1 (HMM E-Value=3.5)
Length = 636
Score = 28.7 bits (61), Expect = 5.5
Identities = 12/28 (42%), Positives = 21/28 (75%)
Frame = -3
Query: 207 ITKALVNPSSRSMAADRVLVQTPPTGAN 124
IT+A++N S+ ++ DRV++ P TG+N
Sbjct: 184 ITRAIIN-SAVTLLVDRVVIDLPSTGSN 210
Score = 28.3 bits (60), Expect = 7.3
Identities = 16/51 (31%), Positives = 22/51 (43%)
Frame = +1
Query: 214 RARSLIRVDPRWRSNCQSEALRGSVMAPTVLATLHNFAWSSCSKEQFHAKS 366
R + R P SNC SE VL LHN A + C+++ +S
Sbjct: 548 RRHTTSREPPEVISNCLSELTDIETRTDEVLVVLHNKALTKCTEDTLILRS 598
>SB_38592| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 227
Score = 28.7 bits (61), Expect = 5.5
Identities = 18/51 (35%), Positives = 25/51 (49%)
Frame = -3
Query: 201 KALVNPSSRSMAADRVLVQTPPTGANPEGPPSWDLVNHIVASHPVLPSGSF 49
+A+V P RSM AD +TP P PPS L+ + H L + +F
Sbjct: 118 QAVVAPRFRSMIADAP--KTPRLTTEPNQPPSLPLIECLTELHVRLRAPAF 166
>SB_11665| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 275
Score = 28.7 bits (61), Expect = 5.5
Identities = 22/73 (30%), Positives = 29/73 (39%), Gaps = 1/73 (1%)
Frame = -2
Query: 679 PLVSLTVAQASXRRTRSTHHWFCPQGVPSRGGARFEPAHVRHSAVGTPQP*ARRPNLTDR 500
P ++T+ Q S T+ HH VP+ G H + GT PN +DR
Sbjct: 125 PSGTITLDQHSTYLTQQYHHLRSALNVPNPSGTITLDQHNVTNPSGTITSALNVPNPSDR 184
Query: 499 H-TEKPSPNSVLH 464
H PS LH
Sbjct: 185 HKVPNPSGTITLH 197
>SB_22107| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 383
Score = 27.9 bits (59), Expect = 9.7
Identities = 17/57 (29%), Positives = 26/57 (45%)
Frame = -3
Query: 279 SKRFRLTIASPSWVNPNK*ASSCAITKALVNPSSRSMAADRVLVQTPPTGANPEGPP 109
S+ +T+ SW P++ +C ++ PSSRS+ L P P GPP
Sbjct: 21 SRARTVTVLRLSWPGPDR--GACGACRSARVPSSRSVVGCGGLRAGGPGRRGPVGPP 75
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,073,740
Number of Sequences: 59808
Number of extensions: 667948
Number of successful extensions: 1749
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1574
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1747
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2119930593
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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