Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0090
(578 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF039718-5|AAP68905.1| 760|Caenorhabditis elegans Prion-like-(q... 29 2.4
AF039718-4|AAP68906.2| 696|Caenorhabditis elegans Prion-like-(q... 29 2.4
Z79605-1|CAB01904.1| 719|Caenorhabditis elegans Hypothetical pr... 28 4.2
Z77662-15|CAI79240.1| 255|Caenorhabditis elegans Hypothetical p... 28 4.2
Z29967-2|CAA82855.1| 722|Caenorhabditis elegans lin-15A protein. 28 4.2
U10413-2|AAA20090.1| 719|Caenorhabditis elegans lin-15A protein... 28 4.2
U10411-1|AAA20087.1| 719|Caenorhabditis elegans lin-15A protein... 28 4.2
L23646-3|AAK67236.1| 1283|Caenorhabditis elegans Hypothetical pr... 28 4.2
Z66563-2|CAA91469.3| 2557|Caenorhabditis elegans Hypothetical pr... 28 5.5
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 28 5.5
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 28 5.5
Z46794-6|CAA86776.1| 416|Caenorhabditis elegans Hypothetical pr... 28 5.5
Z74031-17|CAN86923.1| 380|Caenorhabditis elegans Hypothetical p... 27 7.3
Z74031-16|CAA98452.1| 378|Caenorhabditis elegans Hypothetical p... 27 7.3
Z66515-3|CAA91352.1| 322|Caenorhabditis elegans Hypothetical pr... 27 7.3
Z66515-2|CAA91353.1| 543|Caenorhabditis elegans Hypothetical pr... 27 7.3
S66936-1|AAB28820.1| 360|Caenorhabditis elegans Egl-43 protein. 27 7.3
S66757-1|AAB28819.1| 581|Caenorhabditis elegans Egl-43 protein. 27 7.3
Z70284-13|CAB54280.1| 639|Caenorhabditis elegans Hypothetical p... 27 9.6
Z70284-11|CAA94281.1| 612|Caenorhabditis elegans Hypothetical p... 27 9.6
Z19155-3|CAA79558.2| 812|Caenorhabditis elegans Hypothetical pr... 27 9.6
AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen prot... 27 9.6
AC024822-1|AAF59593.1| 117|Caenorhabditis elegans Hypothetical ... 27 9.6
>AF039718-5|AAP68905.1| 760|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 64,
isoform a protein.
Length = 760
Score = 29.1 bits (62), Expect = 2.4
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -1
Query: 518 PAPTESRSYPSQTVTAVMIPNAVPPPTP 435
P P+ S PS + T +P AVPPP P
Sbjct: 106 PGPSSGMSMPSSSSTNQFVP-AVPPPPP 132
>AF039718-4|AAP68906.2| 696|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 64,
isoform b protein.
Length = 696
Score = 29.1 bits (62), Expect = 2.4
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -1
Query: 518 PAPTESRSYPSQTVTAVMIPNAVPPPTP 435
P P+ S PS + T +P AVPPP P
Sbjct: 8 PGPSSGMSMPSSSSTNQFVP-AVPPPPP 34
>Z79605-1|CAB01904.1| 719|Caenorhabditis elegans Hypothetical
protein ZK678.1 protein.
Length = 719
Score = 28.3 bits (60), Expect = 4.2
Identities = 21/74 (28%), Positives = 30/74 (40%)
Frame = +2
Query: 329 ALDLAXQKSHSRSCGAISGSEDRLWRXRRRASAPDAESEEEQRSGSLPRLPSVTGTTATP 508
AL A + + S S S + R+ AP E EEE+ +P L T
Sbjct: 558 ALTTAPRAQNQPSTSTDSSSSSEMEGIRQSFGAPQKEEEEEEL---VPTLLQNKPTHVES 614
Query: 509 SGPVKSRPIQSTGL 550
S PV+ +P T +
Sbjct: 615 SSPVEKKPPTKTNV 628
>Z77662-15|CAI79240.1| 255|Caenorhabditis elegans Hypothetical
protein F47B8.14 protein.
Length = 255
Score = 28.3 bits (60), Expect = 4.2
Identities = 16/43 (37%), Positives = 17/43 (39%), Gaps = 1/43 (2%)
Frame = -1
Query: 548 ARCSVSGGT*PA-PTESRSYPSQTVTAVMIPNAVPPPTPHQEP 423
AR GG PA P E S P+ A P P P P P
Sbjct: 92 ARDYAEGGAAPAAPAEPASAPAPAPEAAPAPEPTPAPAPEAAP 134
>Z29967-2|CAA82855.1| 722|Caenorhabditis elegans lin-15A protein.
Length = 722
Score = 28.3 bits (60), Expect = 4.2
Identities = 21/74 (28%), Positives = 30/74 (40%)
Frame = +2
Query: 329 ALDLAXQKSHSRSCGAISGSEDRLWRXRRRASAPDAESEEEQRSGSLPRLPSVTGTTATP 508
AL A + + S S S + R+ AP E EEE+ +P L T
Sbjct: 558 ALTTAPRAQNQPSTSTDSSSSSEMEGIRQSFGAPQKEEEEEEL---VPTLLQNKPTHVES 614
Query: 509 SGPVKSRPIQSTGL 550
S PV+ +P T +
Sbjct: 615 SSPVEKKPPTKTNV 628
>U10413-2|AAA20090.1| 719|Caenorhabditis elegans lin-15A protein
protein.
Length = 719
Score = 28.3 bits (60), Expect = 4.2
Identities = 21/74 (28%), Positives = 30/74 (40%)
Frame = +2
Query: 329 ALDLAXQKSHSRSCGAISGSEDRLWRXRRRASAPDAESEEEQRSGSLPRLPSVTGTTATP 508
AL A + + S S S + R+ AP E EEE+ +P L T
Sbjct: 558 ALTTAPRAQNQPSTSTDSSSSSEMEGIRQSFGAPQKEEEEEEL---VPTLLQNKPTHVES 614
Query: 509 SGPVKSRPIQSTGL 550
S PV+ +P T +
Sbjct: 615 SSPVEKKPPTKTNV 628
>U10411-1|AAA20087.1| 719|Caenorhabditis elegans lin-15A protein
protein.
Length = 719
Score = 28.3 bits (60), Expect = 4.2
Identities = 21/74 (28%), Positives = 30/74 (40%)
Frame = +2
Query: 329 ALDLAXQKSHSRSCGAISGSEDRLWRXRRRASAPDAESEEEQRSGSLPRLPSVTGTTATP 508
AL A + + S S S + R+ AP E EEE+ +P L T
Sbjct: 558 ALTTAPRAQNQPSTSTDSSSSSEMEGIRQSFGAPQKEEEEEEL---VPTLLQNKPTHVES 614
Query: 509 SGPVKSRPIQSTGL 550
S PV+ +P T +
Sbjct: 615 SSPVEKKPPTKTNV 628
>L23646-3|AAK67236.1| 1283|Caenorhabditis elegans Hypothetical protein
F44E2.4 protein.
Length = 1283
Score = 28.3 bits (60), Expect = 4.2
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +2
Query: 419 ASAPDAESEEEQRSGSLPRLPSVTGTTATPSGP 517
+S D+ES EQ + P +PS T TT +PS P
Sbjct: 1013 SSESDSESAPEQETE--PTVPSTTETTESPSTP 1043
>Z66563-2|CAA91469.3| 2557|Caenorhabditis elegans Hypothetical protein
F46C3.3 protein.
Length = 2557
Score = 27.9 bits (59), Expect = 5.5
Identities = 14/31 (45%), Positives = 15/31 (48%)
Frame = +2
Query: 455 RSGSLPRLPSVTGTTATPSGPVKSRPIQSTG 547
R SLPR S G PS PV P+Q G
Sbjct: 1452 RERSLPRFHSNNGYNYDPSQPVYMMPVQMNG 1482
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 27.9 bits (59), Expect = 5.5
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = -1
Query: 503 SRSYPSQTVTAVMIPNAVPPPTPHQEPTLFSV 408
S P Q + + P PPP PH EPT+ V
Sbjct: 752 STPQPIQQQQSSIPPPPPPPPPPHCEPTMVHV 783
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 27.9 bits (59), Expect = 5.5
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = -1
Query: 503 SRSYPSQTVTAVMIPNAVPPPTPHQEPTLFSV 408
S P Q + + P PPP PH EPT+ V
Sbjct: 752 STPQPIQQQQSSIPPPPPPPPPPHCEPTMVHV 783
>Z46794-6|CAA86776.1| 416|Caenorhabditis elegans Hypothetical
protein R06F6.6 protein.
Length = 416
Score = 27.9 bits (59), Expect = 5.5
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = +2
Query: 440 SEEEQRSGSLPRLPSVTGTT--ATPSGPVKSRPIQSTGLPLQRQR 568
S E + S LP++T T ATPS P + +P+QS P ++ R
Sbjct: 87 SYEPVKDFSPQLLPAMTPTPIIATPSIPEQPQPLQSPSAPNEKSR 131
>Z74031-17|CAN86923.1| 380|Caenorhabditis elegans Hypothetical
protein F32D8.7b protein.
Length = 380
Score = 27.5 bits (58), Expect = 7.3
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = -1
Query: 518 PAPTESRSYPSQTVTAVMIPNAVPPPTPHQEPTLF 414
PAPT + P T + P PPP P P+ F
Sbjct: 225 PAPTLAPFRPRPTTRRLPPPTTPPPPPPPPAPSPF 259
>Z74031-16|CAA98452.1| 378|Caenorhabditis elegans Hypothetical
protein F32D8.7a protein.
Length = 378
Score = 27.5 bits (58), Expect = 7.3
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = -1
Query: 518 PAPTESRSYPSQTVTAVMIPNAVPPPTPHQEPTLF 414
PAPT + P T + P PPP P P+ F
Sbjct: 223 PAPTLAPFRPRPTTRRLPPPTTPPPPPPPPAPSPF 257
>Z66515-3|CAA91352.1| 322|Caenorhabditis elegans Hypothetical
protein R53.3b protein.
Length = 322
Score = 27.5 bits (58), Expect = 7.3
Identities = 19/68 (27%), Positives = 24/68 (35%)
Frame = +2
Query: 323 PAALDLAXQKSHSRSCGAISGSEDRLWRXRRRASAPDAESEEEQRSGSLPRLPSVTGTTA 502
P L +A Q H + E + ++PDAE S S P TA
Sbjct: 43 PHILQMATQAPHFPLAFLAANPEAYKLMQQTTCASPDAECSSGHASESSPTTTEPVDLTA 102
Query: 503 TPSGPVKS 526
TP P S
Sbjct: 103 TPKPPSTS 110
>Z66515-2|CAA91353.1| 543|Caenorhabditis elegans Hypothetical
protein R53.3a protein.
Length = 543
Score = 27.5 bits (58), Expect = 7.3
Identities = 19/68 (27%), Positives = 24/68 (35%)
Frame = +2
Query: 323 PAALDLAXQKSHSRSCGAISGSEDRLWRXRRRASAPDAESEEEQRSGSLPRLPSVTGTTA 502
P L +A Q H + E + ++PDAE S S P TA
Sbjct: 264 PHILQMATQAPHFPLAFLAANPEAYKLMQQTTCASPDAECSSGHASESSPTTTEPVDLTA 323
Query: 503 TPSGPVKS 526
TP P S
Sbjct: 324 TPKPPSTS 331
>S66936-1|AAB28820.1| 360|Caenorhabditis elegans Egl-43 protein.
Length = 360
Score = 27.5 bits (58), Expect = 7.3
Identities = 19/68 (27%), Positives = 24/68 (35%)
Frame = +2
Query: 323 PAALDLAXQKSHSRSCGAISGSEDRLWRXRRRASAPDAESEEEQRSGSLPRLPSVTGTTA 502
P L +A Q H + E + ++PDAE S S P TA
Sbjct: 43 PHILQMATQAPHFPLAFLAANPEAYKLMQQTTCASPDAECSSGHASESSPTTTEPVDLTA 102
Query: 503 TPSGPVKS 526
TP P S
Sbjct: 103 TPKPPSTS 110
>S66757-1|AAB28819.1| 581|Caenorhabditis elegans Egl-43 protein.
Length = 581
Score = 27.5 bits (58), Expect = 7.3
Identities = 19/68 (27%), Positives = 24/68 (35%)
Frame = +2
Query: 323 PAALDLAXQKSHSRSCGAISGSEDRLWRXRRRASAPDAESEEEQRSGSLPRLPSVTGTTA 502
P L +A Q H + E + ++PDAE S S P TA
Sbjct: 264 PHILQMATQAPHFPLAFLAANPEAYKLMQQTTCASPDAECSSGHASESSPTTTEPVDLTA 323
Query: 503 TPSGPVKS 526
TP P S
Sbjct: 324 TPKPPSTS 331
>Z70284-13|CAB54280.1| 639|Caenorhabditis elegans Hypothetical
protein K07F5.13c protein.
Length = 639
Score = 27.1 bits (57), Expect = 9.6
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Frame = +2
Query: 269 AADSRGTLGGAGC--EARRSPAALDLAXQKSHSRSCGAISGS 388
++ + G LGG G + +SP A LA KS + G++SG+
Sbjct: 108 SSTTSGGLGGIGSTQQTAKSPVATRLAAFKSGTLGAGSLSGN 149
>Z70284-11|CAA94281.1| 612|Caenorhabditis elegans Hypothetical
protein K07F5.13a protein.
Length = 612
Score = 27.1 bits (57), Expect = 9.6
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Frame = +2
Query: 269 AADSRGTLGGAGC--EARRSPAALDLAXQKSHSRSCGAISGS 388
++ + G LGG G + +SP A LA KS + G++SG+
Sbjct: 81 SSTTSGGLGGIGSTQQTAKSPVATRLAAFKSGTLGAGSLSGN 122
>Z19155-3|CAA79558.2| 812|Caenorhabditis elegans Hypothetical
protein F54G8.2 protein.
Length = 812
Score = 27.1 bits (57), Expect = 9.6
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = +3
Query: 54 KVMRHIGGRLVALMHEVSGGASPSTDDDSASEPGALRRSKSHDIL 188
K + GR+ L ++GG+ TD +SEP AL D++
Sbjct: 98 KFSESLSGRMAGL--NIAGGSGQQTDRSQSSEPQALVCIPEDDVM 140
>AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen protein
68 protein.
Length = 329
Score = 27.1 bits (57), Expect = 9.6
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -3
Query: 516 GPDGVAVVPVTDGNRGND 463
GP G + P TDGN GND
Sbjct: 141 GPPGPSGAPGTDGNPGND 158
>AC024822-1|AAF59593.1| 117|Caenorhabditis elegans Hypothetical
protein Y55B1BL.1 protein.
Length = 117
Score = 27.1 bits (57), Expect = 9.6
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -1
Query: 338 DPRLRVICELHIPHRPECRASRP 270
+ R + + H+PHRP CR + P
Sbjct: 27 ESRFKSNMKKHLPHRPRCRVNFP 49
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,354,070
Number of Sequences: 27780
Number of extensions: 288121
Number of successful extensions: 1534
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1306
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1530
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1205362812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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