Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0090
(578 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 23 1.6
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 23 1.6
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 23 1.6
AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor pr... 23 1.6
AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cycl... 23 1.6
AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex det... 21 8.8
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 21 8.8
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 21 8.8
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 21 8.8
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 21 8.8
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 21 8.8
AB086196-1|BAD06465.1| 289|Apis mellifera Period protein. 21 8.8
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 23.4 bits (48), Expect = 1.6
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = +3
Query: 144 SEPGALRRSKSHDILEATXSRGSVASDCERFSWRGSFN 257
++ G LR+S S L A + + + SWRG+++
Sbjct: 220 NDEGTLRKSPSLTSLNAYLIKNQTITCPIKVSWRGNYS 257
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 23.4 bits (48), Expect = 1.6
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = +3
Query: 144 SEPGALRRSKSHDILEATXSRGSVASDCERFSWRGSFN 257
++ G LR+S S L A + + + SWRG+++
Sbjct: 271 NDEGTLRKSPSLTSLNAYLIKNQTITCPIKVSWRGNYS 308
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 23.4 bits (48), Expect = 1.6
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = +3
Query: 144 SEPGALRRSKSHDILEATXSRGSVASDCERFSWRGSFN 257
++ G LR+S S L A + + + SWRG+++
Sbjct: 220 NDEGTLRKSPSLTSLNAYLIKNQTITCPIKVSWRGNYS 257
>AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor
protein.
Length = 501
Score = 23.4 bits (48), Expect = 1.6
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +1
Query: 526 PPDTEHRASVTATTC 570
PP +HR+S +TTC
Sbjct: 278 PPVKQHRSSSASTTC 292
>AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cyclase
alpha 1 subunit protein.
Length = 699
Score = 23.4 bits (48), Expect = 1.6
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +3
Query: 189 EATXSRGSVASDCERFSWRGSFNRR 263
EAT R VAS C+ F W +R+
Sbjct: 280 EATDLRMGVASFCKAFPWHFVVDRQ 304
>AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 21.0 bits (42), Expect = 8.8
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +3
Query: 21 RAGEGSPPLF 50
R GEGS PLF
Sbjct: 165 RTGEGSKPLF 174
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 21.0 bits (42), Expect = 8.8
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +3
Query: 21 RAGEGSPPLF 50
R GEGS PLF
Sbjct: 154 RTGEGSKPLF 163
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.0 bits (42), Expect = 8.8
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +3
Query: 21 RAGEGSPPLF 50
R GEGS PLF
Sbjct: 165 RTGEGSKPLF 174
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.0 bits (42), Expect = 8.8
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +3
Query: 21 RAGEGSPPLF 50
R GEGS PLF
Sbjct: 165 RTGEGSKPLF 174
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 21.0 bits (42), Expect = 8.8
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +3
Query: 21 RAGEGSPPLF 50
R GEGS PLF
Sbjct: 154 RTGEGSKPLF 163
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 21.0 bits (42), Expect = 8.8
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -1
Query: 146 RRAVVICARRCTTRYFMHQ 90
RRA + C + TR F HQ
Sbjct: 232 RRASLFCGLQKYTRSFAHQ 250
>AB086196-1|BAD06465.1| 289|Apis mellifera Period protein.
Length = 289
Score = 21.0 bits (42), Expect = 8.8
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -1
Query: 146 RRAVVICARRCTTRYFMHQ 90
RRA + C + TR F HQ
Sbjct: 227 RRASLFCGLQKYTRSFAHQ 245
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,589
Number of Sequences: 438
Number of extensions: 3376
Number of successful extensions: 18
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16748661
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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