Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0089
         (677 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    47   2e-07
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    37   1e-04
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       22   4.0  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    21   7.0  

>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 46.8 bits (106), Expect = 2e-07
 Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
 Frame = +2

Query: 296 LPRGETFVHTNELQMEEAVKVFRVLYYAKDFDVFMRTACWMRERINGGMFVYAFTAACFH 475
           L R E F        + A K+ R+   A+  D  +  A + R+R+N  +F YAF+ A  H
Sbjct: 74  LGRHENFSLFIPKHRKVAGKLIRIFLAAESIDDLLSNAVFCRDRVNPYLFYYAFSVALLH 133

Query: 476 RTDXQG-SLPARPYEIYPYFFVDSHVIS 556
           R D Q   LP+    ++P  +VDS V +
Sbjct: 134 RPDTQNLDLPSF-IHVFPDKYVDSQVFA 160


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 37.1 bits (82), Expect = 1e-04
 Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
 Frame = +2

Query: 380 KDFDVFMRTACWMRERINGGMFVYAFTAACFHRTDXQG-SLPARPYEIYPYFFVDSHVIS 556
           ++ D  +  A + R+R+N  +F YA + A  HR D Q   LP+   E +P  +VDS V +
Sbjct: 102 RNVDDLLSVAVYARDRVNPYLFSYALSVAILHRQDTQDIDLPSF-IESFPDKYVDSKVFA 160



 Score = 22.6 bits (46), Expect = 3.0
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -2

Query: 583 FSHLHHKGFTDDMAVNEE 530
           F+HL H+ FT  + VN +
Sbjct: 474 FTHLQHQPFTYKITVNNQ 491


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = -2

Query: 448 DEHASVDPFSHPARSPHENIEVLSVVEDSEDFDGFF 341
           D   ++ P + P R P +N + L  +E S +  G F
Sbjct: 125 DMETTLTPCASPNRKPDDNQDHLRRLEMSLEKSGLF 160


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +3

Query: 123 DMKMKELCIMKLLDHI 170
           D K+  LC+  L+DH+
Sbjct: 442 DEKLNALCMTWLMDHV 457


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,628
Number of Sequences: 336
Number of extensions: 2854
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17697850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)