Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0088
         (530 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    53   2e-09
AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16 pro...    24   0.73 
AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3 prot...    24   0.73 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    24   0.96 
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    21   5.1  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    21   5.1  
AF260820-1|AAG02018.1|  139|Tribolium castaneum alpha-esterase l...    21   5.1  
AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.    21   6.8  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    21   6.8  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   8.9  

>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 52.8 bits (121), Expect = 2e-09
 Identities = 24/61 (39%), Positives = 39/61 (63%)
 Frame = +1

Query: 151 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMXASKGRDVIAQAQSGTGKTATFSISI 330
           + +F+   L+  LL  +   G+ KP+AIQ+ AI     GRD+++ AQ+G+GKTA F + I
Sbjct: 157 ITSFETSGLRPHLLENVKKSGYTKPTAIQKYAIPVILSGRDLMSCAQTGSGKTAAFMLPI 216

Query: 331 L 333
           +
Sbjct: 217 I 217


>AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16
           protein.
          Length = 384

 Score = 24.2 bits (50), Expect = 0.73
 Identities = 14/46 (30%), Positives = 22/46 (47%)
 Frame = +1

Query: 127 LDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMXASK 264
           L +DWD     +DD      +++G    GF+ P +IQ +     SK
Sbjct: 307 LYSDWDYF---WDDEQQVPHIVKGNQWLGFDDPKSIQLKVEFANSK 349


>AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3
           protein.
          Length = 384

 Score = 24.2 bits (50), Expect = 0.73
 Identities = 14/46 (30%), Positives = 22/46 (47%)
 Frame = +1

Query: 127 LDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMXASK 264
           L +DWD     +DD      +++G    GF+ P +IQ +     SK
Sbjct: 307 LYSDWDYF---WDDEQQVPHIVKGNQWLGFDDPKSIQLKVEFANSK 349


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.8 bits (49), Expect = 0.96
 Identities = 15/59 (25%), Positives = 22/59 (37%), Gaps = 7/59 (11%)
 Frame = +1

Query: 4    CG*NMSYSSERRSEDWP-----EDSKNGPSKDQGSYDGP--PGMDPGTLDTDWDQVVET 159
            C   + ++ ER+  DWP     E+ K G      S+  P  P   P +    W     T
Sbjct: 1131 CAGGLHWNKERKICDWPKSAKCEEKKPGHKPSTSSWQKPTKPSYRPPSTTNHWQTKTTT 1189


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 21.4 bits (43), Expect = 5.1
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -2

Query: 112 FPEVHRNYLDPSMAHFW 62
           F +V R+Y DP   ++W
Sbjct: 141 FVKVPRHYDDPGKGNYW 157


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 21.4 bits (43), Expect = 5.1
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +3

Query: 228 CNPATRNNXCIQGT 269
           CN   RN+ C+ GT
Sbjct: 319 CNEEERNSHCLGGT 332


>AF260820-1|AAG02018.1|  139|Tribolium castaneum alpha-esterase like
           protein E1 protein.
          Length = 139

 Score = 21.4 bits (43), Expect = 5.1
 Identities = 9/37 (24%), Positives = 20/37 (54%)
 Frame = -3

Query: 183 FFEVHVIEGFDNLIPVGVKCPRVHSRRSIVTTLILRW 73
           FF+ ++I G +N + + V    + +  + +T  +L W
Sbjct: 43  FFKKNLIVGSENCLVLNVYTKNLRTDTNRITQPVLFW 79


>AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.
          Length = 209

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 9/16 (56%), Positives = 9/16 (56%)
 Frame = +2

Query: 86  KVVTMDLREWTLGHLT 133
           KV T  LR W   HLT
Sbjct: 187 KVATNILRAWLFQHLT 202


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 9/16 (56%), Positives = 9/16 (56%)
 Frame = +2

Query: 86  KVVTMDLREWTLGHLT 133
           KV T  LR W   HLT
Sbjct: 343 KVATNILRAWLFQHLT 358


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 12/27 (44%), Positives = 13/27 (48%)
 Frame = +2

Query: 80  RIKVVTMDLREWTLGHLTPTGIKLSKP 160
           R  V   DLR  T G L  T   +SKP
Sbjct: 361 RSPVTPADLRLLTRGRLVLTVSSVSKP 387


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,175
Number of Sequences: 336
Number of extensions: 2679
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12887571
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)