Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0088
(530 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 118 2e-27
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 118 2e-27
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 107 6e-24
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 107 6e-24
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 73 1e-13
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 60 1e-09
Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical pr... 59 2e-09
Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical pr... 59 2e-09
U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA he... 59 2e-09
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 57 7e-09
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 54 5e-08
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 52 3e-07
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 51 5e-07
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 51 5e-07
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 50 8e-07
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 50 1e-06
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 50 1e-06
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 50 1e-06
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 49 2e-06
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 49 2e-06
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 49 2e-06
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 49 2e-06
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 49 2e-06
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 49 2e-06
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 48 3e-06
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 48 3e-06
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 48 6e-06
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 48 6e-06
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 46 2e-05
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 46 2e-05
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 46 2e-05
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 45 3e-05
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 42 2e-04
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 42 2e-04
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 42 3e-04
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 41 6e-04
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 41 6e-04
AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 41 6e-04
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 40 0.001
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 39 0.002
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 39 0.003
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 38 0.006
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 37 0.008
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 37 0.008
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 35 0.042
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 33 0.097
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 33 0.097
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 32 0.29
U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein... 32 0.29
AC006748-6|AAF60516.1| 582|Caenorhabditis elegans Hypothetical ... 31 0.39
U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical pr... 30 1.2
AC006748-5|AAX55685.1| 471|Caenorhabditis elegans Hypothetical ... 29 2.7
Z66495-6|CAA91275.2| 547|Caenorhabditis elegans Hypothetical pr... 28 4.8
U00033-1|AAC48292.3| 731|Caenorhabditis elegans Hypothetical pr... 28 4.8
AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical ... 28 4.8
Z68302-2|CAA92631.1| 630|Caenorhabditis elegans Hypothetical pr... 27 8.4
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 118 bits (285), Expect = 2e-27
Identities = 62/103 (60%), Positives = 78/103 (75%)
Frame = +1
Query: 121 GTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMXASKGRDVIAQAQSGT 300
G ++ ++DQVVE+FDDM LKEELLRGIY +GFEKPSAIQ+RAI+ + G+DVIAQAQSGT
Sbjct: 18 GLIEGNYDQVVESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGT 77
Query: 301 GKTATFSISILQTNRYXIS*MSSFDPGSHKXXWAQQIQKVVIA 429
GKTATFS+SILQ + + + + AQQIQKV+ A
Sbjct: 78 GKTATFSVSILQRIDHEDPHVQALVMAPTREL-AQQIQKVMSA 119
Score = 44.0 bits (99), Expect = 7e-05
Identities = 20/35 (57%), Positives = 25/35 (71%)
Frame = +3
Query: 426 SPLXIHLNAKCHACIGGTNVREDIRQLEVGVHVVV 530
S L +LN CIGGT+VR+D R+LE G+HVVV
Sbjct: 118 SALGEYLNVNILPCIGGTSVRDDQRKLEAGIHVVV 152
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 118 bits (285), Expect = 2e-27
Identities = 62/103 (60%), Positives = 78/103 (75%)
Frame = +1
Query: 121 GTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMXASKGRDVIAQAQSGT 300
G ++ ++DQVVE+FDDM LKEELLRGIY +GFEKPSAIQ+RAI+ + G+DVIAQAQSGT
Sbjct: 18 GLIEGNYDQVVESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGT 77
Query: 301 GKTATFSISILQTNRYXIS*MSSFDPGSHKXXWAQQIQKVVIA 429
GKTATFS+SILQ + + + + AQQIQKV+ A
Sbjct: 78 GKTATFSVSILQRIDHEDPHVQALVMAPTREL-AQQIQKVMSA 119
Score = 44.0 bits (99), Expect = 7e-05
Identities = 20/35 (57%), Positives = 25/35 (71%)
Frame = +3
Query: 426 SPLXIHLNAKCHACIGGTNVREDIRQLEVGVHVVV 530
S L +LN CIGGT+VR+D R+LE G+HVVV
Sbjct: 118 SALGEYLNVNILPCIGGTSVRDDQRKLEAGIHVVV 152
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 107 bits (256), Expect = 6e-24
Identities = 59/94 (62%), Positives = 68/94 (72%)
Frame = +1
Query: 148 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMXASKGRDVIAQAQSGTGKTATFSIS 327
V+ TFD M L+E+LLRGIYAYGFEKPSAIQQRA+ K RDVIAQAQSGTGKTATFSIS
Sbjct: 24 VIPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAVPAILKARDVIAQAQSGTGKTATFSIS 83
Query: 328 ILQTNRYXIS*MSSFDPGSHKXXWAQQIQKVVIA 429
+LQ+ + + S A QIQKVV+A
Sbjct: 84 VLQSLDTQVRETQALIL-SPTRELAVQIQKVVLA 116
Score = 49.6 bits (113), Expect = 1e-06
Identities = 19/29 (65%), Positives = 25/29 (86%)
Frame = +3
Query: 441 HLNAKCHACIGGTNVREDIRQLEVGVHVV 527
++N +CHACIGGTN+ EDIR+L+ G HVV
Sbjct: 120 YMNVQCHACIGGTNLGEDIRKLDYGQHVV 148
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 107 bits (256), Expect = 6e-24
Identities = 59/94 (62%), Positives = 68/94 (72%)
Frame = +1
Query: 148 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMXASKGRDVIAQAQSGTGKTATFSIS 327
++ TFD M L+E+LLRGIYAYGFEKPSAIQQRAI K RDVIAQAQSGTGKTATFSIS
Sbjct: 24 IIPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAIPAILKARDVIAQAQSGTGKTATFSIS 83
Query: 328 ILQTNRYXIS*MSSFDPGSHKXXWAQQIQKVVIA 429
+LQ+ + + S A QIQKVV+A
Sbjct: 84 VLQSLDTQVRETQALIL-SPTRELAVQIQKVVLA 116
Score = 49.6 bits (113), Expect = 1e-06
Identities = 19/29 (65%), Positives = 25/29 (86%)
Frame = +3
Query: 441 HLNAKCHACIGGTNVREDIRQLEVGVHVV 527
++N +CHACIGGTN+ EDIR+L+ G HVV
Sbjct: 120 YMNVQCHACIGGTNLGEDIRKLDYGQHVV 148
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 72.9 bits (171), Expect = 1e-13
Identities = 34/56 (60%), Positives = 42/56 (75%)
Frame = +1
Query: 169 MNLKEELLRGIYAYGFEKPSAIQQRAIMXASKGRDVIAQAQSGTGKTATFSISILQ 336
M LKEELLRGIY +GFEKPSAIQ+ A+ + G+DV Q+Q+G+GKT I ILQ
Sbjct: 1 MELKEELLRGIYGFGFEKPSAIQKSAVAPCTTGKDVTIQSQAGSGKTVISLIDILQ 56
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 60.1 bits (139), Expect = 1e-09
Identities = 26/59 (44%), Positives = 42/59 (71%)
Frame = +1
Query: 160 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMXASKGRDVIAQAQSGTGKTATFSISILQ 336
F+D L +LL GI+ G+EKPS IQ+ +I A G+D++A+A++GTGKT + I +++
Sbjct: 45 FEDFCLGRDLLMGIFEKGWEKPSPIQEASIGVALTGQDILARAKNGTGKTGAYCIPVIE 103
Score = 29.9 bits (64), Expect = 1.2
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +3
Query: 441 HLNAKCHACIGGTNVREDIRQLEVGVHVVV 530
H+ K GGT++R+DI +L VH+V+
Sbjct: 137 HIQLKVMVTTGGTDLRDDIMRLNGTVHLVI 166
>Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical
protein C26D10.2b protein.
Length = 268
Score = 59.3 bits (137), Expect = 2e-09
Identities = 31/59 (52%), Positives = 36/59 (61%)
Frame = +1
Query: 160 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMXASKGRDVIAQAQSGTGKTATFSISILQ 336
F D LK E+LR I GFE PS +Q I A G DV+ QA+SG GKTA F I+ LQ
Sbjct: 43 FRDFLLKPEILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVITTLQ 101
>Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical
protein C26D10.2a protein.
Length = 425
Score = 59.3 bits (137), Expect = 2e-09
Identities = 31/59 (52%), Positives = 36/59 (61%)
Frame = +1
Query: 160 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMXASKGRDVIAQAQSGTGKTATFSISILQ 336
F D LK E+LR I GFE PS +Q I A G DV+ QA+SG GKTA F I+ LQ
Sbjct: 43 FRDFLLKPEILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVITTLQ 101
>U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA
helicase protein.
Length = 417
Score = 59.3 bits (137), Expect = 2e-09
Identities = 31/59 (52%), Positives = 36/59 (61%)
Frame = +1
Query: 160 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMXASKGRDVIAQAQSGTGKTATFSISILQ 336
F D LK E+LR I GFE PS +Q I A G DV+ QA+SG GKTA F I+ LQ
Sbjct: 42 FRDFLLKPEILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVITTLQ 100
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 57.2 bits (132), Expect = 7e-09
Identities = 38/100 (38%), Positives = 54/100 (54%), Gaps = 2/100 (2%)
Frame = +1
Query: 55 EDSKNGPSK-DQGSYDGPPGMDPG-TLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPS 228
E K+G SK Q + D + G +LDT V +F+ MNL ++L+ G+ P+
Sbjct: 116 EKRKSGKSKKSQENEDFFSALIDGKSLDTS---VNVSFEQMNLSRQILKACSGAGYSDPT 172
Query: 229 AIQQRAIMXASKGRDVIAQAQSGTGKTATFSISILQTNRY 348
IQQ I A G+D+ A A +GTGKTA F + IL+ Y
Sbjct: 173 PIQQACIPVALTGKDICACAATGTGKTAAFVLPILERMIY 212
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 54.4 bits (125), Expect = 5e-08
Identities = 26/70 (37%), Positives = 43/70 (61%)
Frame = +1
Query: 130 DTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMXASKGRDVIAQAQSGTGKT 309
D + D ++F ++ + + L G+ KPS IQQ A+ A +G+DVI A++G+GKT
Sbjct: 36 DDEEDVKEKSFAELGVSQPLCDACQRLGWMKPSKIQQAALPHALQGKDVIGLAETGSGKT 95
Query: 310 ATFSISILQT 339
F+I +LQ+
Sbjct: 96 GAFAIPVLQS 105
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 51.6 bits (118), Expect = 3e-07
Identities = 23/73 (31%), Positives = 44/73 (60%)
Frame = +1
Query: 118 PGTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMXASKGRDVIAQAQSG 297
P + D++ +TF D L E +L+ I G+EK + +Q+ I A + ++++ +A++G
Sbjct: 77 PQVDEMDFEPEHKTFADFGLDERILKSIGELGWEKANQVQESVISLALENKNIMGRARTG 136
Query: 298 TGKTATFSISILQ 336
+GKT F I ++Q
Sbjct: 137 SGKTGAFLIPLVQ 149
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 51.2 bits (117), Expect = 5e-07
Identities = 23/56 (41%), Positives = 36/56 (64%)
Frame = +1
Query: 157 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMXASKGRDVIAQAQSGTGKTATFSI 324
TF+ + + ++ L + F++PS +Q RAI GRD++ QA+SGTGKT FS+
Sbjct: 23 TFESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSV 78
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 51.2 bits (117), Expect = 5e-07
Identities = 23/56 (41%), Positives = 36/56 (64%)
Frame = +1
Query: 157 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMXASKGRDVIAQAQSGTGKTATFSI 324
TF+ + + ++ L + F++PS +Q RAI GRD++ QA+SGTGKT FS+
Sbjct: 23 TFESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSV 78
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 50.4 bits (115), Expect = 8e-07
Identities = 22/66 (33%), Positives = 41/66 (62%)
Frame = +1
Query: 136 DWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMXASKGRDVIAQAQSGTGKTAT 315
D Q + F D++L E + I G+++P+ +Q+ +I GRD+++ AQ+G+GKTA
Sbjct: 160 DVPQPISLFSDLSLHEWIEENIKTAGYDRPTPVQKYSIPALQGGRDLMSCAQTGSGKTAA 219
Query: 316 FSISIL 333
F + ++
Sbjct: 220 FLVPLV 225
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 50.0 bits (114), Expect = 1e-06
Identities = 23/60 (38%), Positives = 38/60 (63%)
Frame = +1
Query: 154 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMXASKGRDVIAQAQSGTGKTATFSISIL 333
+TF + NL E + + + G+ K + IQQ A+ +G D++A AQ+G+GKTA F + I+
Sbjct: 341 KTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIM 400
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 50.0 bits (114), Expect = 1e-06
Identities = 23/60 (38%), Positives = 38/60 (63%)
Frame = +1
Query: 154 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMXASKGRDVIAQAQSGTGKTATFSISIL 333
+TF + NL E + + + G+ K + IQQ A+ +G D++A AQ+G+GKTA F + I+
Sbjct: 341 KTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIM 400
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 50.0 bits (114), Expect = 1e-06
Identities = 23/60 (38%), Positives = 38/60 (63%)
Frame = +1
Query: 154 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMXASKGRDVIAQAQSGTGKTATFSISIL 333
+TF + NL E + + + G+ K + IQQ A+ +G D++A AQ+G+GKTA F + I+
Sbjct: 341 KTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIM 400
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 49.2 bits (112), Expect = 2e-06
Identities = 24/63 (38%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
Frame = +1
Query: 151 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI--MXASKGRDVIAQAQSGTGKTATFSI 324
+ +F ++ LK E+L+ + F+ P+ IQ+ A+ + ++IAQAQSGTGKTA F +
Sbjct: 208 ISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVL 267
Query: 325 SIL 333
++L
Sbjct: 268 TML 270
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 49.2 bits (112), Expect = 2e-06
Identities = 24/63 (38%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
Frame = +1
Query: 151 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI--MXASKGRDVIAQAQSGTGKTATFSI 324
+ +F ++ LK E+L+ + F+ P+ IQ+ A+ + ++IAQAQSGTGKTA F +
Sbjct: 233 ISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVL 292
Query: 325 SIL 333
++L
Sbjct: 293 TML 295
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical
protein T07D4.4a protein.
Length = 1022
Score = 49.2 bits (112), Expect = 2e-06
Identities = 24/63 (38%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
Frame = +1
Query: 151 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI--MXASKGRDVIAQAQSGTGKTATFSI 324
+ +F ++ LK E+L+ + F+ P+ IQ+ A+ + ++IAQAQSGTGKTA F +
Sbjct: 617 ISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVL 676
Query: 325 SIL 333
++L
Sbjct: 677 TML 679
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 48.8 bits (111), Expect = 2e-06
Identities = 22/60 (36%), Positives = 37/60 (61%)
Frame = +1
Query: 154 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMXASKGRDVIAQAQSGTGKTATFSISIL 333
+TF + NL E + + + G+ K + IQQ + +G D++A AQ+G+GKTA F + I+
Sbjct: 552 KTFSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIM 611
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 48.8 bits (111), Expect = 2e-06
Identities = 22/60 (36%), Positives = 37/60 (61%)
Frame = +1
Query: 154 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMXASKGRDVIAQAQSGTGKTATFSISIL 333
+TF + NL E + + + G+ K + IQQ + +G D++A AQ+G+GKTA F + I+
Sbjct: 552 KTFSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIM 611
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 48.8 bits (111), Expect = 2e-06
Identities = 22/60 (36%), Positives = 37/60 (61%)
Frame = +1
Query: 154 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMXASKGRDVIAQAQSGTGKTATFSISIL 333
+TF + NL E + + + G+ K + IQQ + +G D++A AQ+G+GKTA F + I+
Sbjct: 552 KTFSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIM 611
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 48.4 bits (110), Expect = 3e-06
Identities = 20/63 (31%), Positives = 39/63 (61%)
Frame = +1
Query: 145 QVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMXASKGRDVIAQAQSGTGKTATFSI 324
Q ++F D ++ + + R + G+ + + IQQ + + G+D++A AQ+G+GKTA F +
Sbjct: 295 QPCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLL 354
Query: 325 SIL 333
I+
Sbjct: 355 PIM 357
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 48.4 bits (110), Expect = 3e-06
Identities = 20/63 (31%), Positives = 39/63 (61%)
Frame = +1
Query: 145 QVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMXASKGRDVIAQAQSGTGKTATFSI 324
Q ++F D ++ + + R + G+ + + IQQ + + G+D++A AQ+G+GKTA F +
Sbjct: 295 QPCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLL 354
Query: 325 SIL 333
I+
Sbjct: 355 PIM 357
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 47.6 bits (108), Expect = 6e-06
Identities = 21/59 (35%), Positives = 36/59 (61%)
Frame = +1
Query: 160 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMXASKGRDVIAQAQSGTGKTATFSISILQ 336
+ + L + + I GF +P+ IQ++ I G+DV+A +++G+GKTA F I +LQ
Sbjct: 26 WQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAFVIPMLQ 84
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 47.6 bits (108), Expect = 6e-06
Identities = 21/59 (35%), Positives = 36/59 (61%)
Frame = +1
Query: 160 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMXASKGRDVIAQAQSGTGKTATFSISILQ 336
+ + L + + I GF +P+ IQ++ I G+DV+A +++G+GKTA F I +LQ
Sbjct: 26 WQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAFVIPMLQ 84
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 45.6 bits (103), Expect = 2e-05
Identities = 19/62 (30%), Positives = 37/62 (59%)
Frame = +1
Query: 151 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMXASKGRDVIAQAQSGTGKTATFSISI 330
+E F++ ++ + G+ KP+ +Q+ +I RD+++ AQ+G+GKTA F + I
Sbjct: 138 IEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPI 197
Query: 331 LQ 336
+Q
Sbjct: 198 IQ 199
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 45.6 bits (103), Expect = 2e-05
Identities = 19/62 (30%), Positives = 37/62 (59%)
Frame = +1
Query: 151 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMXASKGRDVIAQAQSGTGKTATFSISI 330
+E F++ ++ + G+ KP+ +Q+ +I RD+++ AQ+G+GKTA F + I
Sbjct: 122 IEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPI 181
Query: 331 LQ 336
+Q
Sbjct: 182 IQ 183
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 45.6 bits (103), Expect = 2e-05
Identities = 19/62 (30%), Positives = 37/62 (59%)
Frame = +1
Query: 151 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMXASKGRDVIAQAQSGTGKTATFSISI 330
+E F++ ++ + G+ KP+ +Q+ +I RD+++ AQ+G+GKTA F + I
Sbjct: 119 IEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPI 178
Query: 331 LQ 336
+Q
Sbjct: 179 IQ 180
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 45.2 bits (102), Expect = 3e-05
Identities = 19/61 (31%), Positives = 38/61 (62%)
Frame = +1
Query: 151 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMXASKGRDVIAQAQSGTGKTATFSISI 330
+ +++ +E+ + + G+ +P+ IQ++AI + RDVI A++G+GKTA F + +
Sbjct: 300 LRNWEEAGFPDEVYQAVKEIGYLEPTPIQRQAIPIGLQNRDVIGVAETGSGKTAAFLLPL 359
Query: 331 L 333
L
Sbjct: 360 L 360
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 42.3 bits (95), Expect = 2e-04
Identities = 18/62 (29%), Positives = 36/62 (58%)
Frame = +1
Query: 148 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMXASKGRDVIAQAQSGTGKTATFSIS 327
++ F D ++ LL + +PS IQ ++I ++ R+V+A A +G+GKT F++
Sbjct: 124 IILRFSDSSMSPSLLNRLSENSIRQPSPIQMQSIPFMTERRNVLASAPTGSGKTLAFALP 183
Query: 328 IL 333
++
Sbjct: 184 VI 185
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 42.3 bits (95), Expect = 2e-04
Identities = 19/67 (28%), Positives = 39/67 (58%)
Frame = +1
Query: 136 DWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMXASKGRDVIAQAQSGTGKTAT 315
D + ++T+ + +++ + + + KP++IQ +AI GRDVI A++G+GKT
Sbjct: 298 DCPKPIKTWAQCGVNLKMMNVLKKFEYSKPTSIQAQAIPSIMSGRDVIGIAKTGSGKTLA 357
Query: 316 FSISILQ 336
F + + +
Sbjct: 358 FLLPMFR 364
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 41.9 bits (94), Expect = 3e-04
Identities = 20/59 (33%), Positives = 32/59 (54%)
Frame = +1
Query: 160 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMXASKGRDVIAQAQSGTGKTATFSISILQ 336
F+D L L G+ + KP+ IQ+ I + G DV+ A++G+GKT I +L+
Sbjct: 78 FEDFPLSWRTLEGLKDNDYTKPTEIQRDTIAYSLTGSDVVGAAKTGSGKTLALVIPVLE 136
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 40.7 bits (91), Expect = 6e-04
Identities = 20/54 (37%), Positives = 32/54 (59%)
Frame = +1
Query: 157 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMXASKGRDVIAQAQSGTGKTATF 318
+F + + L+ I +E+P+ IQ AI A GRDV+ A++G+GKTA +
Sbjct: 266 SFAHFSFDKLLMEAIRKSEYEQPTPIQAMAIPSALSGRDVLGIAKTGSGKTAAY 319
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 40.7 bits (91), Expect = 6e-04
Identities = 32/110 (29%), Positives = 51/110 (46%), Gaps = 7/110 (6%)
Frame = +1
Query: 25 SSERRSEDWPEDSKNGPSKDQGSYDGPPGMDPGTLDTDWDQVVETFDDMNLKE------E 186
SS ++SE+ E + P K+Q G D G + + D K+ E
Sbjct: 107 SSAKKSENATETTTEKP-KEQKKRKGGENGDTGKPKKSKKEASKKTDISAWKQFYFLPNE 165
Query: 187 LLRGIYAYGFEKPSAIQQRAIMXASKGR-DVIAQAQSGTGKTATFSISIL 333
+L I GF +P+ IQ + A + R DV+ A++G+GKT F I ++
Sbjct: 166 VLEAIEQMGFSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLV 215
>AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical
protein Y55F3BR.1 protein.
Length = 728
Score = 40.7 bits (91), Expect = 6e-04
Identities = 19/59 (32%), Positives = 32/59 (54%)
Frame = +1
Query: 160 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMXASKGRDVIAQAQSGTGKTATFSISILQ 336
F++ + EL + + + P+A+Q AI G D + A++G+GKT FS+ I Q
Sbjct: 4 FEEFGIIPELSDALSSLNWTLPTAVQSEAIPAILGGADALIAAETGSGKTGAFSLPIAQ 62
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 39.5 bits (88), Expect = 0.001
Identities = 17/50 (34%), Positives = 31/50 (62%)
Frame = +1
Query: 187 LLRGIYAYGFEKPSAIQQRAIMXASKGRDVIAQAQSGTGKTATFSISILQ 336
LL+ + GF + IQ ++I +G+DV+A A++G+GKT F + ++
Sbjct: 79 LLKAVQGLGFTTMTEIQAKSIDPLLEGKDVLASAKTGSGKTLAFLLPAIE 128
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 39.1 bits (87), Expect = 0.002
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Frame = +1
Query: 151 VETFDDMNLKEELLRGIYAY-GFEKPSAIQQRAIMXASKGRDVIAQAQSGTGKTATFSIS 327
+ +F +M + LL + G P+AIQ + I A GRD+I A +G+GKT TF +
Sbjct: 188 IGSFLEMKFPKSLLEFMQKQKGIVTPTAIQIQGIPVALSGRDMIGIASTGSGKTMTFVLP 247
Query: 328 IL 333
++
Sbjct: 248 LV 249
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 38.7 bits (86), Expect = 0.003
Identities = 19/43 (44%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Frame = +1
Query: 208 YG-FEKPSAIQQRAIMXASKGRDVIAQAQSGTGKTATFSISIL 333
YG F+KP+ IQ + A GRD+I+ A++G+GKT F + L
Sbjct: 146 YGKFQKPTVIQSISWPIAMSGRDIISIAKTGSGKTLAFMLPAL 188
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 37.5 bits (83), Expect = 0.006
Identities = 18/41 (43%), Positives = 24/41 (58%)
Frame = +1
Query: 211 GFEKPSAIQQRAIMXASKGRDVIAQAQSGTGKTATFSISIL 333
GFEKPS IQ + G+D I +Q+G+GKT F + L
Sbjct: 103 GFEKPSPIQSQMWPLLLSGQDCIGVSQTGSGKTLAFLLPAL 143
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 37.1 bits (82), Expect = 0.008
Identities = 26/103 (25%), Positives = 46/103 (44%), Gaps = 1/103 (0%)
Frame = +1
Query: 31 ERRSEDWPEDSKNGPSKDQ-GSYDGPPGMDPGTLDTDWDQVVETFDDMNLKEELLRGIYA 207
E + D E+ G D+ S D P P + D + + F + + + + +
Sbjct: 50 EDEASDEDEEESEGEEGDEFKSSDDTP--KPIQISED-NMTTKKFSQLGVCSWITQQLQT 106
Query: 208 YGFEKPSAIQQRAIMXASKGRDVIAQAQSGTGKTATFSISILQ 336
+ + +Q I +G D++ A++GTGKT F+I ILQ
Sbjct: 107 MQIKTATPVQAACIPKILEGSDILGCARTGTGKTLAFAIPILQ 149
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 37.1 bits (82), Expect = 0.008
Identities = 26/103 (25%), Positives = 46/103 (44%), Gaps = 1/103 (0%)
Frame = +1
Query: 31 ERRSEDWPEDSKNGPSKDQ-GSYDGPPGMDPGTLDTDWDQVVETFDDMNLKEELLRGIYA 207
E + D E+ G D+ S D P P + D + + F + + + + +
Sbjct: 50 EDEASDEDEEESEGEEGDEFKSSDDTP--KPIQISED-NMTTKKFSQLGVCSWITQQLQT 106
Query: 208 YGFEKPSAIQQRAIMXASKGRDVIAQAQSGTGKTATFSISILQ 336
+ + +Q I +G D++ A++GTGKT F+I ILQ
Sbjct: 107 MQIKTATPVQAACIPKILEGSDILGCARTGTGKTLAFAIPILQ 149
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 34.7 bits (76), Expect = 0.042
Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +1
Query: 199 IYAYGFEKPSAIQQRAIMXASKGR-DVIAQAQSGTGKTATFSISIL 333
I+ + F +P+ IQ + A + R DV+ A++G+GKT F I ++
Sbjct: 3 IFFFRFSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLV 48
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 33.5 bits (73), Expect = 0.097
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +1
Query: 157 TFDDMN-LKEELLRGIYAYGFEKPSAIQQRAIMXASKGRDVIAQAQSGTGKTATFSI 324
+FD L ++L + +P+ IQ+ + G DV+A A +G+GKT F I
Sbjct: 736 SFDGFKILPQDLHDNLKRMKMNRPTPIQRASFFPIMHGNDVVACAHTGSGKTLAFLI 792
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line
helicase protein 4 protein.
Length = 1156
Score = 33.5 bits (73), Expect = 0.097
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +1
Query: 157 TFDDMN-LKEELLRGIYAYGFEKPSAIQQRAIMXASKGRDVIAQAQSGTGKTATFSI 324
+FD L ++L + +P+ IQ+ + G DV+A A +G+GKT F I
Sbjct: 736 SFDGFKILPQDLHDNLKRMKMNRPTPIQRASFFPIMHGNDVVACAHTGSGKTLAFLI 792
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 31.9 bits (69), Expect = 0.29
Identities = 17/64 (26%), Positives = 29/64 (45%)
Frame = +1
Query: 142 DQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMXASKGRDVIAQAQSGTGKTATFS 321
D + ++ + L +L + + IQ I G DV+ QA++ GKTA F
Sbjct: 377 DVRLTSWTNSGLHPTILETLKRIKYNNVRTIQGAMIPQVLDGHDVLGQAETSAGKTAAFG 436
Query: 322 ISIL 333
+ I+
Sbjct: 437 LPII 440
>U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein 14
protein.
Length = 528
Score = 31.9 bits (69), Expect = 0.29
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +1
Query: 226 SAIQQRAIMXASKGRDVIAQAQSGTGKTATFSISILQ 336
+A+QQ +I +GR ++ +A +G GKT F I ++
Sbjct: 117 NAVQQMSIQVIREGRGLVVEAPTGIGKTYAFLIPAIE 153
>AC006748-6|AAF60516.1| 582|Caenorhabditis elegans Hypothetical
protein Y39A3B.5a protein.
Length = 582
Score = 31.5 bits (68), Expect = 0.39
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -2
Query: 115 PFPEVHRNYLDPSMAHFWNPLANLLTFFQTNKT 17
P P + + D FWN L+N LTF Q +KT
Sbjct: 338 PPPAIVASMTDEQKLSFWNKLSNKLTFSQQDKT 370
>U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical
protein ZC317.1 protein.
Length = 340
Score = 29.9 bits (64), Expect = 1.2
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +1
Query: 232 IQQRAIMXASKGRDVIAQAQSGTGKTATFSISILQ 336
+QQ +I +GR ++ +A +G GKT F I ++
Sbjct: 19 VQQMSIQVIREGRGLVVEAPTGIGKTYAFLIPAIE 53
>AC006748-5|AAX55685.1| 471|Caenorhabditis elegans Hypothetical
protein Y39A3B.5c protein.
Length = 471
Score = 28.7 bits (61), Expect = 2.7
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -2
Query: 85 DPSMAHFWNPLANLLTFFQTNKT 17
D FWN L+N LTF Q +KT
Sbjct: 237 DEQKLSFWNKLSNKLTFSQQDKT 259
>Z66495-6|CAA91275.2| 547|Caenorhabditis elegans Hypothetical
protein C36A4.8 protein.
Length = 547
Score = 27.9 bits (59), Expect = 4.8
Identities = 28/131 (21%), Positives = 56/131 (42%)
Frame = +2
Query: 17 CLIRLKEGQKIGQRIPKMGHRRIKVVTMDLREWTLGHLTPTGIKLSKPSMT*TSKKNC*E 196
C ++EG+ I Q+ + + + R+W + +T TG+ LS+ T TS +
Sbjct: 362 CAEYIREGRSISQKSTAYLYAIARKCVIVGRQWLVDCIT-TGLLLSEADYTITSCSSTIP 420
Query: 197 AYTPMVLKNLLQSSNAQ*XLHPRDAMLSLKPSQELEKLLLSLYRFYKQIDTXFRECQALI 376
P + + + ++ H + + + + L K ++ Y YKQ+ ++C I
Sbjct: 421 VKIPPSIGSEMGWLRSRNDEHGK--LFAGRRFMILRKFTMNPYFDYKQLIELVQQCGGEI 478
Query: 377 LAPTRXSGPNK 409
L+ P K
Sbjct: 479 LSCYENLSPEK 489
>U00033-1|AAC48292.3| 731|Caenorhabditis elegans Hypothetical
protein F37C12.7 protein.
Length = 731
Score = 27.9 bits (59), Expect = 4.8
Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Frame = +1
Query: 28 SERRSEDWPEDSKNGPSKD-QG-SYDGPPGMDPGTLDTDWDQVVETFDD 168
SER +W +D ++GP ++ QG + + PG D T+D W + VE +D+
Sbjct: 63 SERVKANWVDD-RDGPIRNIQGHASETFPGKD--TVDKVWRKCVELYDE 108
>AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical
protein Y38A10A.6 protein.
Length = 520
Score = 27.9 bits (59), Expect = 4.8
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +1
Query: 226 SAIQQRAIMXASKGRDVIAQAQSGTGKTATFSISILQ 336
+A+QQ++I R ++ A +G GKT F I ++
Sbjct: 116 NAVQQKSIQAIRDRRGLLVDAPTGIGKTYAFLIPAIE 152
>Z68302-2|CAA92631.1| 630|Caenorhabditis elegans Hypothetical
protein ZK792.5 protein.
Length = 630
Score = 27.1 bits (57), Expect = 8.4
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = -1
Query: 323 IEKVAVFPVPDWA*AITSRPLDAXIIARCWIAEGFS 216
++K+A + +WA A+T++P I A W+ G S
Sbjct: 244 LQKLAGILMDNWADAVTTQPSSFLIRAIVWVCCGLS 279
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,471,135
Number of Sequences: 27780
Number of extensions: 262288
Number of successful extensions: 790
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 766
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 786
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1049512662
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -