BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0087
(666 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific tran... 23 6.5
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein. 23 6.5
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein. 23 6.5
AY578803-1|AAT07308.1| 474|Anopheles gambiae mothers against Dp... 23 6.5
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc... 23 8.7
AJ000675-1|CAA04232.1| 600|Anopheles gambiae infection responsi... 23 8.7
>AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific
transcription factor FRU-MA protein.
Length = 960
Score = 23.4 bits (48), Expect = 6.5
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +1
Query: 532 HRAGVHHH 555
HRAG+HHH
Sbjct: 495 HRAGLHHH 502
>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
Length = 3320
Score = 23.4 bits (48), Expect = 6.5
Identities = 11/36 (30%), Positives = 17/36 (47%)
Frame = -1
Query: 153 LVHRFLASLGKNLSVIAYFLFDFVIXHLRFIVVFRK 46
L H+F +LG N + + + D H F FR+
Sbjct: 2397 LYHKFATALGHNSADVQSYKIDANGNHQHFYTGFRR 2432
>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
Length = 3318
Score = 23.4 bits (48), Expect = 6.5
Identities = 11/36 (30%), Positives = 17/36 (47%)
Frame = -1
Query: 153 LVHRFLASLGKNLSVIAYFLFDFVIXHLRFIVVFRK 46
L H+F +LG N + + + D H F FR+
Sbjct: 2398 LYHKFATALGHNSADVQSYKIDANGNHQHFYTGFRR 2433
>AY578803-1|AAT07308.1| 474|Anopheles gambiae mothers against Dpp
protein.
Length = 474
Score = 23.4 bits (48), Expect = 6.5
Identities = 12/44 (27%), Positives = 17/44 (38%)
Frame = +3
Query: 240 PELPSPHRPSAFHRCQLNTSERDKIEC*QPWLVEMNARPPTRPI 371
P+L S H CQ S + K C P+ + P P+
Sbjct: 109 PDLQSHHELKPIETCQYPFSAKQKEVCINPYHYKRVESPVLPPV 152
>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
channel alpha2-delta subunit 1 protein.
Length = 1256
Score = 23.0 bits (47), Expect = 8.7
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +1
Query: 532 HRAGVHHHCFIIINSWTSLYYNFFIPCHLSNQKFAFL 642
H+ GV+ + FI+ N+ LY+ P ++Q A L
Sbjct: 529 HKLGVNGYAFIVDNNGRVLYHPDLRPLSDNDQYSATL 565
>AJ000675-1|CAA04232.1| 600|Anopheles gambiae infection responsive
serine proteaselike protein protein.
Length = 600
Score = 23.0 bits (47), Expect = 8.7
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = +3
Query: 210 TSNTCPRRQVPELPSPHRPSAFHRCQLN 293
T CP R +LPS +RP +C N
Sbjct: 63 THYCCPDRS-EQLPSRNRPKLLTQCDSN 89
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 716,110
Number of Sequences: 2352
Number of extensions: 15007
Number of successful extensions: 76
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 76
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 76
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66486645
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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