Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0086
         (694 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    25   0.78 
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    25   0.78 
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    23   3.1  
DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory pro...    22   4.1  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   7.2  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   9.6  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    21   9.6  

>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 24.6 bits (51), Expect = 0.78
 Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 4/46 (8%)
 Frame = -1

Query: 505 VPLRLSYG--GLVL--VSHLYTVISRFCVLDQYLSYFFLSVIFNRF 380
           +PL L Y   G++   +S  ++ +SRF  L  Y  +F+LS I+  +
Sbjct: 53  LPLTLLYKLLGIIQFPISAHFSFMSRFLCLPFYSYFFYLSYIYTTY 98


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 24.6 bits (51), Expect = 0.78
 Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 4/46 (8%)
 Frame = -1

Query: 505 VPLRLSYG--GLVL--VSHLYTVISRFCVLDQYLSYFFLSVIFNRF 380
           +PL L Y   G++   +S  ++ +SRF  L  Y  +F+LS I+  +
Sbjct: 9   LPLTLLYKLLGIIQFPISAHFSFMSRFLCLPFYSYFFYLSYIYTTY 54


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
 Frame = -1

Query: 457 YTVISRFC-VLDQYLSYFFLSVIFNRFVCQIYYANFSRFKL 338
           Y  +   C +LD+ LSY  L+   N F   I+   F  F L
Sbjct: 271 YNRLCHLCFLLDEKLSYIILTSFLNNFYFIIFQV-FESFYL 310


>DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory
          protein 4 protein.
          Length = 133

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -1

Query: 85 YTFIFIRAGQCDISTMKWINKY 20
          Y F+F+  G  + +T K+  KY
Sbjct: 9  YLFLFVHYGWSEDTTHKYTTKY 30


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = +3

Query: 450 TVYKCETSTKPPYDKRSGTLRQCCRSC 530
           TV  C+        KR    +QCC++C
Sbjct: 775 TVCTCDAKYLEIKCKRIYNEKQCCKNC 801


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -1

Query: 499 LRLSYGGLVLVSHLYTVISRFCVLDQYLS 413
           LRL   G +    ++   S+ C L Q+LS
Sbjct: 206 LRLKPEGRISNRRVFISFSKICYLHQHLS 234


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -1

Query: 499 LRLSYGGLVLVSHLYTVISRFCVLDQYLS 413
           LRL   G +    ++   S+ C L Q+LS
Sbjct: 224 LRLKPEGRISNRRVFISFSKICYLHQHLS 252


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,203
Number of Sequences: 336
Number of extensions: 3722
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18218375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)