Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0085
         (764 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein ...    25   3.4  
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    24   4.5  
AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled ...    24   5.9  
AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein...    24   5.9  

>CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein
           protein.
          Length = 1087

 Score = 24.6 bits (51), Expect = 3.4
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = -2

Query: 685 AKFLKCLPEYIVSRV 641
           ++ LKC+PEYI+  +
Sbjct: 609 SRVLKCIPEYIIENI 623


>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 13/40 (32%), Positives = 19/40 (47%), Gaps = 3/40 (7%)
 Frame = +3

Query: 57  FGAADWIAKAENFARTPIESYSYSLNA---RNQITLWGPN 167
           F +A W A A +  R  I  Y Y +     RN++ L+  N
Sbjct: 559 FNSASWTAIARSLQRINIPKYLYDIIGNYFRNRVLLYETN 598


>AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled
           receptor protein.
          Length = 611

 Score = 23.8 bits (49), Expect = 5.9
 Identities = 12/29 (41%), Positives = 14/29 (48%)
 Frame = +3

Query: 678 NFARRFHCGRFIYLLLXFXLKECPWXVAR 764
           N ARR H   F+  LL F L    W + R
Sbjct: 293 NTARRCHRFLFVAYLLSFLLSTPQWMIFR 321


>AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 612

 Score = 23.8 bits (49), Expect = 5.9
 Identities = 12/29 (41%), Positives = 14/29 (48%)
 Frame = +3

Query: 678 NFARRFHCGRFIYLLLXFXLKECPWXVAR 764
           N ARR H   F+  LL F L    W + R
Sbjct: 294 NTARRCHRFLFVAYLLSFLLSTPQWMIFR 322


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 856,825
Number of Sequences: 2352
Number of extensions: 19984
Number of successful extensions: 18
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79418373
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)