BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0085
(764 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U43573-1|AAC50513.1| 743|Homo sapiens alpha-N-acetylglucosamini... 67 6e-11
U43572-1|AAC50512.1| 743|Homo sapiens alpha-N-acetylglucosamini... 67 6e-11
U40846-1|AAB06188.1| 743|Homo sapiens alpha-N-acetylglucosamini... 67 6e-11
L78465-1|AAB36605.1| 639|Homo sapiens alpha-N-acetylglucosamini... 67 6e-11
L78464-1|AAB36604.1| 743|Homo sapiens alpha-N-acetylglucosamini... 67 6e-11
BC053991-1|AAH53991.1| 743|Homo sapiens N-acetylglucosaminidase... 67 6e-11
AB209530-1|BAD92767.1| 449|Homo sapiens huntingtin interacting ... 67 6e-11
>U43573-1|AAC50513.1| 743|Homo sapiens
alpha-N-acetylglucosaminidase protein.
Length = 743
Score = 67.3 bits (157), Expect = 6e-11
Identities = 31/75 (41%), Positives = 44/75 (58%)
Frame = +3
Query: 27 IESILRTNTFFGAADWIAKAENFARTPIESYSYSLNARNQITLWGPNGEITDYACKQWAE 206
++ +L +++ F W+ +A A + E+ Y N+R Q+TLWGP G I DYA KQ A
Sbjct: 606 LDEVLASDSRFLLGSWLEQARAAAVSEAEADFYEQNSRYQLTLWGPEGNILDYANKQLAG 665
Query: 207 LFHYYYIPRWTKFLD 251
L YY PRW FL+
Sbjct: 666 LVANYYTPRWRLFLE 680
>U43572-1|AAC50512.1| 743|Homo sapiens
alpha-N-acetylglucosaminidase protein.
Length = 743
Score = 67.3 bits (157), Expect = 6e-11
Identities = 31/75 (41%), Positives = 44/75 (58%)
Frame = +3
Query: 27 IESILRTNTFFGAADWIAKAENFARTPIESYSYSLNARNQITLWGPNGEITDYACKQWAE 206
++ +L +++ F W+ +A A + E+ Y N+R Q+TLWGP G I DYA KQ A
Sbjct: 606 LDEVLASDSRFLLGSWLEQARAAAVSEAEADFYEQNSRYQLTLWGPEGNILDYANKQLAG 665
Query: 207 LFHYYYIPRWTKFLD 251
L YY PRW FL+
Sbjct: 666 LVANYYTPRWRLFLE 680
>U40846-1|AAB06188.1| 743|Homo sapiens
alpha-N-acetylglucosaminidase protein.
Length = 743
Score = 67.3 bits (157), Expect = 6e-11
Identities = 31/75 (41%), Positives = 44/75 (58%)
Frame = +3
Query: 27 IESILRTNTFFGAADWIAKAENFARTPIESYSYSLNARNQITLWGPNGEITDYACKQWAE 206
++ +L +++ F W+ +A A + E+ Y N+R Q+TLWGP G I DYA KQ A
Sbjct: 606 LDEVLASDSRFLLGSWLEQARAAAVSEAEADFYEQNSRYQLTLWGPEGNILDYANKQLAG 665
Query: 207 LFHYYYIPRWTKFLD 251
L YY PRW FL+
Sbjct: 666 LVANYYTPRWRLFLE 680
>L78465-1|AAB36605.1| 639|Homo sapiens
alpha-N-acetylglucosaminidase protein.
Length = 639
Score = 67.3 bits (157), Expect = 6e-11
Identities = 31/75 (41%), Positives = 44/75 (58%)
Frame = +3
Query: 27 IESILRTNTFFGAADWIAKAENFARTPIESYSYSLNARNQITLWGPNGEITDYACKQWAE 206
++ +L +++ F W+ +A A + E+ Y N+R Q+TLWGP G I DYA KQ A
Sbjct: 502 LDEVLASDSRFLLGSWLEQARAAAVSEAEADFYEQNSRYQLTLWGPEGNILDYANKQLAG 561
Query: 207 LFHYYYIPRWTKFLD 251
L YY PRW FL+
Sbjct: 562 LVANYYTPRWRLFLE 576
>L78464-1|AAB36604.1| 743|Homo sapiens
alpha-N-acetylglucosaminidase protein.
Length = 743
Score = 67.3 bits (157), Expect = 6e-11
Identities = 31/75 (41%), Positives = 44/75 (58%)
Frame = +3
Query: 27 IESILRTNTFFGAADWIAKAENFARTPIESYSYSLNARNQITLWGPNGEITDYACKQWAE 206
++ +L +++ F W+ +A A + E+ Y N+R Q+TLWGP G I DYA KQ A
Sbjct: 606 LDEVLASDSRFLLGSWLEQARAAAVSEAEADFYEQNSRYQLTLWGPEGNILDYANKQLAG 665
Query: 207 LFHYYYIPRWTKFLD 251
L YY PRW FL+
Sbjct: 666 LVANYYTPRWRLFLE 680
>BC053991-1|AAH53991.1| 743|Homo sapiens N-acetylglucosaminidase,
alpha- (Sanfilippo disease IIIB) protein.
Length = 743
Score = 67.3 bits (157), Expect = 6e-11
Identities = 31/75 (41%), Positives = 44/75 (58%)
Frame = +3
Query: 27 IESILRTNTFFGAADWIAKAENFARTPIESYSYSLNARNQITLWGPNGEITDYACKQWAE 206
++ +L +++ F W+ +A A + E+ Y N+R Q+TLWGP G I DYA KQ A
Sbjct: 606 LDEVLASDSRFLLGSWLEQARAAAVSEAEADFYEQNSRYQLTLWGPEGNILDYANKQLAG 665
Query: 207 LFHYYYIPRWTKFLD 251
L YY PRW FL+
Sbjct: 666 LVANYYTPRWRLFLE 680
>AB209530-1|BAD92767.1| 449|Homo sapiens huntingtin interacting
protein-1-related protein.
Length = 449
Score = 67.3 bits (157), Expect = 6e-11
Identities = 31/75 (41%), Positives = 44/75 (58%)
Frame = +3
Query: 27 IESILRTNTFFGAADWIAKAENFARTPIESYSYSLNARNQITLWGPNGEITDYACKQWAE 206
++ +L +++ F W+ +A A + E+ Y N+R Q+TLWGP G I DYA KQ A
Sbjct: 282 LDEVLASDSRFLLGSWLEQARAAAVSEAEADFYEQNSRYQLTLWGPEGNILDYANKQLAG 341
Query: 207 LFHYYYIPRWTKFLD 251
L YY PRW FL+
Sbjct: 342 LVANYYTPRWRLFLE 356
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,442,738
Number of Sequences: 237096
Number of extensions: 2707265
Number of successful extensions: 9035
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8755
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9035
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9199990470
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -