Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0085
         (764 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ876408-1|CAI45289.1|   52|Apis mellifera putative diuretic hor...    26   0.44 
DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase doma...    25   1.0  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   7.2  
AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                21   9.5  

>AJ876408-1|CAI45289.1|   52|Apis mellifera putative diuretic
           hormone-I protein.
          Length = 52

 Score = 25.8 bits (54), Expect = 0.44
 Identities = 15/43 (34%), Positives = 27/43 (62%)
 Frame = -2

Query: 481 GSLSRIGADNVLRQIIETRIKRPFLVQIQSKIYRVNRRSMDSV 353
           GSLS + + +VLRQ +   + R   +Q Q++I   NRR ++++
Sbjct: 9   GSLSIVNSMDVLRQRVLLELARRKALQDQAQI-DANRRLLETI 50


>DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase domain
           protein protein.
          Length = 448

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = -2

Query: 661 EYIVSRVPHRHXRSSGVALKVTPFPL 584
           EY +  V  R  RSS +A K T +PL
Sbjct: 120 EYYIIEVNARLSRSSALASKATGYPL 145


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +2

Query: 413 WAFYPGLDDLPQNVIRPD 466
           W   P L+D PQN + P+
Sbjct: 387 WQPKPTLEDAPQNSLLPN 404


>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = -3

Query: 225 CNNSGIAQPIVCMHNLLFPR*GPTELFD 142
           C+N+GI    V   N+L  + G  +L D
Sbjct: 171 CHNAGIVHADVKPKNILMSKNGQPKLTD 198


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 229,991
Number of Sequences: 438
Number of extensions: 4866
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 23911269
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)