Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0082
(804 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 196 1e-50
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 196 2e-50
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 196 2e-50
SB_56| Best HMM Match : Actin (HMM E-Value=0) 196 2e-50
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 196 2e-50
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 111 8e-25
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 105 4e-23
SB_54| Best HMM Match : Actin (HMM E-Value=0) 96 3e-20
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 75 7e-14
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 61 9e-10
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 60 3e-09
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 51 1e-06
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 51 1e-06
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 45 6e-05
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 6e-04
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.029
SB_31419| Best HMM Match : Laminin_EGF (HMM E-Value=7) 32 0.47
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 32 0.63
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.83
SB_18097| Best HMM Match : NadA (HMM E-Value=2.2) 31 0.83
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 31 0.83
SB_56804| Best HMM Match : 7tm_1 (HMM E-Value=0) 31 1.1
SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_21074| Best HMM Match : NadA (HMM E-Value=2) 31 1.1
SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8) 31 1.1
SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0) 31 1.1
SB_5494| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_32583| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.4
SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28) 31 1.4
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_50928| Best HMM Match : 7tm_2 (HMM E-Value=4.7e-07) 29 3.3
SB_37346| Best HMM Match : Extensin_2 (HMM E-Value=0.62) 29 3.3
SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28) 29 4.4
SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) 29 4.4
SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2) 29 4.4
SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27) 29 4.4
SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39) 29 4.4
SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) 29 4.4
SB_58989| Best HMM Match : RVT_1 (HMM E-Value=0) 29 5.8
SB_29502| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.8
SB_9283| Best HMM Match : DUF947 (HMM E-Value=0.3) 29 5.8
SB_44229| Best HMM Match : DUF947 (HMM E-Value=0.67) 28 7.7
SB_23472| Best HMM Match : HIT (HMM E-Value=0.43) 28 7.7
SB_23104| Best HMM Match : DUF947 (HMM E-Value=0.098) 28 7.7
SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
SB_18966| Best HMM Match : RVT_1 (HMM E-Value=0.028) 28 7.7
SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
SB_6040| Best HMM Match : DUF947 (HMM E-Value=0.098) 28 7.7
SB_45987| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
SB_25064| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
SB_19427| Best HMM Match : RVT_1 (HMM E-Value=7.5e-32) 28 7.7
SB_12041| Best HMM Match : PHD (HMM E-Value=0.001) 28 7.7
SB_12008| Best HMM Match : RVT_1 (HMM E-Value=0) 28 7.7
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 196 bits (479), Expect = 1e-50
Identities = 94/111 (84%), Positives = 95/111 (85%)
Frame = +1
Query: 256 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 435
GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA
Sbjct: 56 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 115
Query: 436 NREKMTQIMFETFNTPAMYVAIQAGSRCTRPVVPPVSCWTSGDGVSHTVPI 588
NREKMTQIMFETFN+PAMYVAIQA SGDGVSHTVPI
Sbjct: 116 NREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPI 166
Score = 112 bits (270), Expect = 3e-25
Identities = 49/54 (90%), Positives = 53/54 (98%)
Frame = +2
Query: 92 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 253
M D+++AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 54
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 196 bits (477), Expect = 2e-50
Identities = 94/118 (79%), Positives = 96/118 (81%)
Frame = +1
Query: 256 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 435
GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA
Sbjct: 56 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 115
Query: 436 NREKMTQIMFETFNTPAMYVAIQAGSRCTRPVVPPVSCWTSGDGVSHTVPILRRIRTP 609
NREKMTQIMFETFN+PAMYVAIQA SGDGV+HTVPI P
Sbjct: 116 NREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALP 173
Score = 112 bits (270), Expect = 3e-25
Identities = 51/54 (94%), Positives = 53/54 (98%)
Frame = +2
Query: 92 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 253
M D+E+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 54
Score = 38.3 bits (85), Expect = 0.007
Identities = 19/27 (70%), Positives = 20/27 (74%)
Frame = +2
Query: 584 PSYEGYALPHAILRLGL*PVRDFTDXL 664
P YEGYALPHAI+RL L RD TD L
Sbjct: 165 PIYEGYALPHAIIRLDL-AGRDLTDYL 190
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 196 bits (477), Expect = 2e-50
Identities = 94/118 (79%), Positives = 96/118 (81%)
Frame = +1
Query: 256 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 435
GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA
Sbjct: 55 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 114
Query: 436 NREKMTQIMFETFNTPAMYVAIQAGSRCTRPVVPPVSCWTSGDGVSHTVPILRRIRTP 609
NREKMTQIMFETFN+PAMYVAIQA SGDGV+HTVPI P
Sbjct: 115 NREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALP 172
Score = 109 bits (263), Expect = 2e-24
Identities = 49/52 (94%), Positives = 52/52 (100%)
Frame = +2
Query: 98 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 253
+++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 53
Score = 39.1 bits (87), Expect = 0.004
Identities = 20/27 (74%), Positives = 20/27 (74%)
Frame = +2
Query: 584 PSYEGYALPHAILRLGL*PVRDFTDXL 664
P YEGYALPHAILRL L RD TD L
Sbjct: 164 PIYEGYALPHAILRLDL-AGRDLTDYL 189
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 196 bits (477), Expect = 2e-50
Identities = 94/118 (79%), Positives = 96/118 (81%)
Frame = +1
Query: 256 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 435
GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA
Sbjct: 55 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 114
Query: 436 NREKMTQIMFETFNTPAMYVAIQAGSRCTRPVVPPVSCWTSGDGVSHTVPILRRIRTP 609
NREKMTQIMFETFN+PAMYVAIQA SGDGV+HTVPI P
Sbjct: 115 NREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALP 172
Score = 111 bits (266), Expect = 8e-25
Identities = 50/52 (96%), Positives = 52/52 (100%)
Frame = +2
Query: 98 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 253
++EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 53
Score = 39.1 bits (87), Expect = 0.004
Identities = 20/27 (74%), Positives = 20/27 (74%)
Frame = +2
Query: 584 PSYEGYALPHAILRLGL*PVRDFTDXL 664
P YEGYALPHAILRL L RD TD L
Sbjct: 164 PIYEGYALPHAILRLDL-AGRDLTDYL 189
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 196 bits (477), Expect = 2e-50
Identities = 94/118 (79%), Positives = 96/118 (81%)
Frame = +1
Query: 256 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 435
GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA
Sbjct: 56 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 115
Query: 436 NREKMTQIMFETFNTPAMYVAIQAGSRCTRPVVPPVSCWTSGDGVSHTVPILRRIRTP 609
NREKMTQIMFETFN+PAMYVAIQA SGDGV+HTVPI P
Sbjct: 116 NREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALP 173
Score = 117 bits (281), Expect = 1e-26
Identities = 52/54 (96%), Positives = 54/54 (100%)
Frame = +2
Query: 92 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 253
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 54
Score = 39.1 bits (87), Expect = 0.004
Identities = 20/27 (74%), Positives = 20/27 (74%)
Frame = +2
Query: 584 PSYEGYALPHAILRLGL*PVRDFTDXL 664
P YEGYALPHAILRL L RD TD L
Sbjct: 165 PIYEGYALPHAILRLDL-AGRDLTDYL 190
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 111 bits (266), Expect = 8e-25
Identities = 49/52 (94%), Positives = 52/52 (100%)
Frame = +2
Query: 98 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 253
D++VAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 53
Score = 74.5 bits (175), Expect = 9e-14
Identities = 33/36 (91%), Positives = 33/36 (91%)
Frame = +1
Query: 256 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF 363
GDEAQSKRGILTLKYPIEHGIVTNWDDMEKI TF
Sbjct: 55 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIMFETF 90
Score = 52.4 bits (120), Expect = 4e-07
Identities = 29/58 (50%), Positives = 33/58 (56%)
Frame = +1
Query: 436 NREKMTQIMFETFNTPAMYVAIQAGSRCTRPVVPPVSCWTSGDGVSHTVPILRRIRTP 609
N + M +IMFETFN+PAMYVAIQA SGDGV+HTVPI P
Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALP 135
Score = 38.3 bits (85), Expect = 0.007
Identities = 19/27 (70%), Positives = 20/27 (74%)
Frame = +2
Query: 584 PSYEGYALPHAILRLGL*PVRDFTDXL 664
P YEGYALPHAI+RL L RD TD L
Sbjct: 127 PIYEGYALPHAIIRLDL-AGRDLTDYL 152
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 105 bits (252), Expect = 4e-23
Identities = 53/133 (39%), Positives = 76/133 (57%), Gaps = 1/133 (0%)
Frame = +1
Query: 214 SGRDGRYGTEGLL*GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPE 390
S + G + L+ GDEA R +L + YP+++GIV NWDDM+ +W +TF +++ + P
Sbjct: 44 SQKVGDIEVKDLMVGDEASQLRYMLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPR 103
Query: 391 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAGSRCTRPVVPPVSCWTSGDGV 570
VLLTE PLNP NREKM ++MFE + +Y+AIQA + SGDGV
Sbjct: 104 NTKVLLTEPPLNPMKNREKMIEVMFENYQFEGVYIAIQAVLTLYAQGLLTGVVIDSGDGV 163
Query: 571 SHTVPILRRIRTP 609
+H P+ P
Sbjct: 164 THICPVYEGFALP 176
Score = 44.4 bits (100), Expect = 1e-04
Identities = 17/33 (51%), Positives = 24/33 (72%)
Frame = +2
Query: 110 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 208
+ +V DNG+G K G+AG + P +FPS+VGRP
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRP 39
Score = 31.1 bits (67), Expect = 1.1
Identities = 15/28 (53%), Positives = 17/28 (60%)
Frame = +2
Query: 581 CPSYEGYALPHAILRLGL*PVRDFTDXL 664
CP YEG+ALPH RL + RD T L
Sbjct: 167 CPVYEGFALPHLTRRLDI-AGRDITKYL 193
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 96.3 bits (229), Expect = 3e-20
Identities = 46/82 (56%), Positives = 57/82 (69%)
Frame = +1
Query: 343 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAGSRCT 522
K+W H F ++LRV E+ PVLLTEAPLNPK NRE+M Q+MFE+FN P MYVA+QA
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQAVMALY 2188
Query: 523 RPVVPPVSCWTSGDGVSHTVPI 588
+ + GDGVSHTVP+
Sbjct: 2189 ASGRTTGTVFDCGDGVSHTVPV 2210
Score = 59.7 bits (138), Expect = 3e-09
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = +2
Query: 116 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 217
+V+DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
Score = 29.5 bits (63), Expect = 3.3
Identities = 22/46 (47%), Positives = 24/46 (52%)
Frame = +2
Query: 584 PSYEGYALPHAILRLGL*PVRDFTDXLHEDSFNRAAGXSFQLPTAE 721
P Y+GY LPHA R+ L RD T L R G SFQ TAE
Sbjct: 2209 PVYDGYWLPHATQRIDL-AGRDLTHYLQRLVTER--GYSFQ-STAE 2250
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 74.9 bits (176), Expect = 7e-14
Identities = 35/73 (47%), Positives = 46/73 (63%)
Frame = +1
Query: 391 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAGSRCTRPVVPPVSCWTSGDGV 570
+HPVLLTEAPLNP+ NREK ++ FETFN PA+++++QA +GDGV
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDAGDGV 185
Query: 571 SHTVPILRRIRTP 609
SH+VPI P
Sbjct: 186 SHSVPIYEGFAMP 198
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 61.3 bits (142), Expect = 9e-10
Identities = 24/65 (36%), Positives = 42/65 (64%)
Frame = +1
Query: 301 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 480
PI+ G++ +WD EKI + + ++ HP+L++EA N + REK+T++MFE +N
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62
Query: 481 PAMYV 495
PA ++
Sbjct: 63 PAFFL 67
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 59.7 bits (138), Expect = 3e-09
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = +2
Query: 101 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 217
E LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 51.2 bits (117), Expect = 1e-06
Identities = 21/49 (42%), Positives = 32/49 (65%)
Frame = +2
Query: 86 FKMCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG 232
FK+ A+V+DNG G+ K GFAGD PR + P++VG P+ +++G
Sbjct: 693 FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIG 741
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 51.2 bits (117), Expect = 1e-06
Identities = 24/51 (47%), Positives = 29/51 (56%)
Frame = +1
Query: 256 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 408
GDEA K T K+PI H IV +WD ME+ W + LR PE+H LL
Sbjct: 287 GDEAIDKPSYAT-KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 45.2 bits (102), Expect = 6e-05
Identities = 25/51 (49%), Positives = 28/51 (54%)
Frame = +1
Query: 457 IMFETFNTPAMYVAIQAGSRCTRPVVPPVSCWTSGDGVSHTVPILRRIRTP 609
IMFE FN+PA+YVAIQA + SGDGVSH VPI P
Sbjct: 1 IMFEAFNSPAVYVAIQAVLSLYASGRTTGVVFDSGDGVSHNVPIYEGYALP 51
Score = 39.1 bits (87), Expect = 0.004
Identities = 20/27 (74%), Positives = 20/27 (74%)
Frame = +2
Query: 584 PSYEGYALPHAILRLGL*PVRDFTDXL 664
P YEGYALPHAILRL L RD TD L
Sbjct: 43 PIYEGYALPHAILRLDL-AGRDLTDYL 68
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 41.9 bits (94), Expect = 6e-04
Identities = 21/39 (53%), Positives = 27/39 (69%)
Frame = -3
Query: 214 MAGPSHDRGEHGARSIISCETGLAHTGAIVYYQRGNFFV 98
MA + D GE+G+ SI+S ETGLAHTGAI+ Q + V
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 36.3 bits (80), Expect = 0.029
Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Frame = +1
Query: 217 GRDGRYGTEGLL*GDEAQSKRGIL-TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP-- 387
GR G + GL G++ S I L+ P + +VT+++ E++ H F + P
Sbjct: 105 GRKGEPDSGGLAVGNDIGSVEMIRWALRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGG 164
Query: 388 EEHPVLLTEAPLNPKANRE 444
HPV++TE NP R+
Sbjct: 165 VNHPVIMTEPVCNPNYCRQ 183
>SB_31419| Best HMM Match : Laminin_EGF (HMM E-Value=7)
Length = 186
Score = 32.3 bits (70), Expect = 0.47
Identities = 22/91 (24%), Positives = 38/91 (41%), Gaps = 2/91 (2%)
Frame = -2
Query: 395 CSSGATRSSL*KV*CQIFSMSSQLVTIPCSMGYLRVRIPLLLCASS--PHKSPSVPYRPS 222
CS + + C + ++V CS + V + ++C+ PH+ PS
Sbjct: 88 CSPSRAHVDVFPITCSCRCVPHRMVMSMCSPSRVYVDVSPIVCSCRCVPHRVLMSMCSPS 147
Query: 221 RPDGGAFPRSRGTRREEHHLLRNRPCTYRSH 129
R D FP + R HH+L + + R+H
Sbjct: 148 RADVDVFPITCSRRCVFHHVLMSMCSSSRAH 178
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 31.9 bits (69), Expect = 0.63
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = +1
Query: 256 GDEAQSKRGILTLKY--PIEHGIVTNWDDMEKIWHHTFYNE 372
GD+ + + L Y P + G + NWD ++IW +TF E
Sbjct: 275 GDQIEECKDYSALFYVLPFQKGFLVNWDVEKQIWDYTFGKE 315
Score = 28.7 bits (61), Expect = 5.8
Identities = 17/54 (31%), Positives = 32/54 (59%)
Frame = +2
Query: 104 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYEEMR 265
++A LV+D G+ K GFA + APR++ P+ + + + + + +G D EE +
Sbjct: 232 KMATLVLDCGACSQKIGFASNQAPRSI-PNAIFKAKSERRKLFIG--DQIEECK 282
>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 31.5 bits (68), Expect = 0.83
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -1
Query: 189 GNTARGASSPAKPALHIPEPLSTT 118
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_18097| Best HMM Match : NadA (HMM E-Value=2.2)
Length = 272
Score = 31.5 bits (68), Expect = 0.83
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = -3
Query: 280 LFCSVPHLLIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 137
L C ++ V+LSH + H M D +HG RS SCET L T
Sbjct: 213 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVPT 259
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 31.5 bits (68), Expect = 0.83
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -1
Query: 189 GNTARGASSPAKPALHIPEPLSTT 118
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_56804| Best HMM Match : 7tm_1 (HMM E-Value=0)
Length = 345
Score = 31.1 bits (67), Expect = 1.1
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = -3
Query: 592 VRWARCGRHRRRKSSTIPVVRPDAYSESRLGWRRT 488
V W RCGR +RRK S + R S R G T
Sbjct: 306 VLWCRCGREKRRKRSGKRISRTALISMERTGLHHT 340
>SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 591
Score = 31.1 bits (67), Expect = 1.1
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = -3
Query: 280 LFCSVPHLLIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 137
L C ++ V+LSH + H M D +HG RS SCET L T
Sbjct: 408 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 454
>SB_21074| Best HMM Match : NadA (HMM E-Value=2)
Length = 358
Score = 31.1 bits (67), Expect = 1.1
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = -3
Query: 280 LFCSVPHLLIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 137
L C ++ V+LSH + H M D +HG RS SCET L T
Sbjct: 271 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 317
>SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8)
Length = 339
Score = 31.1 bits (67), Expect = 1.1
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = -3
Query: 280 LFCSVPHLLIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 137
L C ++ V+LSH + H M D +HG RS SCET L T
Sbjct: 249 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 295
>SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 181
Score = 31.1 bits (67), Expect = 1.1
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = -3
Query: 280 LFCSVPHLLIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 137
L C ++ V+LSH + H M D +HG RS SCET L T
Sbjct: 91 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137
>SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 402
Score = 31.1 bits (67), Expect = 1.1
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = -3
Query: 280 LFCSVPHLLIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 137
L C ++ V+LSH + H M D +HG RS SCET L T
Sbjct: 91 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137
>SB_5494| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 345
Score = 31.1 bits (67), Expect = 1.1
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = -3
Query: 592 VRWARCGRHRRRKSSTIPVVRPDAYSESRLGWRRT 488
V W RCGR +RRK S + R S R G T
Sbjct: 306 VLWCRCGREKRRKRSGKRISRTALISMERTGLHHT 340
>SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 458
Score = 31.1 bits (67), Expect = 1.1
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = -3
Query: 280 LFCSVPHLLIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 137
L C ++ V+LSH + H M D +HG RS SCET L T
Sbjct: 125 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 171
>SB_32583| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 526
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Frame = +2
Query: 467 KHSTRPPCTSPSK-PALAVRVRSYHRYRAGLPATVS-PTPC 583
+H PP +S S P + HR+ PAT S PTPC
Sbjct: 10 RHHPPPPASSSSPTPCYGITPHPLHRHHLPPPATASPPTPC 50
>SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28)
Length = 570
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = -3
Query: 280 LFCSVPHLLIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 137
L C ++ ++LSH + H M D +HG RS SCET L T
Sbjct: 173 LTCICCKVMEHIVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 219
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 30.3 bits (65), Expect = 1.9
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -1
Query: 189 GNTARGASSPAKPALHIPEPLSTT 118
GNT R PAKP+L++P P S T
Sbjct: 540 GNTNRRTRIPAKPSLNLPSPPSKT 563
>SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1259
Score = 30.3 bits (65), Expect = 1.9
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +3
Query: 417 SPQPQGQQREDDPDHVRNIQHARHVRRHPSR 509
SP P+ R D+P V A HV HPSR
Sbjct: 265 SPTPKRCVRFDEPPTVEKYSKASHVTEHPSR 295
>SB_50928| Best HMM Match : 7tm_2 (HMM E-Value=4.7e-07)
Length = 1127
Score = 29.5 bits (63), Expect = 3.3
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +2
Query: 572 PTPCPSYEGYALPHAILRLGL*PVRDFTDXLHE 670
P P PS+ Y +P+ ++R+G R LHE
Sbjct: 839 PRPGPSFSAYGMPNGLMRIGSGYPRVVPSFLHE 871
>SB_37346| Best HMM Match : Extensin_2 (HMM E-Value=0.62)
Length = 331
Score = 29.5 bits (63), Expect = 3.3
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Frame = +2
Query: 467 KHSTRPPCTSPSKPALAVRVRS-YH--RYRAGLPATVSPTPCPSYEGYALP 610
+HS +PP T+P L + R+ YH + ++ +P SP P P + +P
Sbjct: 166 RHSKKPPWTAPEPDFLIDKGRARYHGGQSQSQIPTWTSPEPNPHVDKSKIP 216
>SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28)
Length = 419
Score = 29.1 bits (62), Expect = 4.4
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -3
Query: 280 LFCSVPHLLIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 137
L C ++ ++LSH + H L A +HG R +SCET L T
Sbjct: 242 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 288
>SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)
Length = 330
Score = 29.1 bits (62), Expect = 4.4
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -3
Query: 280 LFCSVPHLLIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 137
L C ++ ++LSH + H L A +HG R +SCET L T
Sbjct: 103 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 149
>SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2396
Score = 29.1 bits (62), Expect = 4.4
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -3
Query: 280 LFCSVPHLLIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 137
L C ++ ++LSH + H L A +HG R +SCET L T
Sbjct: 1641 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 1687
>SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 859
Score = 29.1 bits (62), Expect = 4.4
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -3
Query: 280 LFCSVPHLLIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 137
L C ++ ++LSH + H L A +HG R +SCET L T
Sbjct: 669 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 715
>SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2)
Length = 329
Score = 29.1 bits (62), Expect = 4.4
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -3
Query: 280 LFCSVPHLLIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 137
L C ++ ++LSH + H L A +HG R +SCET L T
Sbjct: 224 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 270
>SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27)
Length = 1492
Score = 29.1 bits (62), Expect = 4.4
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -3
Query: 280 LFCSVPHLLIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 137
L C ++ ++LSH + H L A +HG R +SCET L T
Sbjct: 1079 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 1125
>SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39)
Length = 452
Score = 29.1 bits (62), Expect = 4.4
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -3
Query: 280 LFCSVPHLLIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 137
L C ++ ++LSH + H L A +HG R +SCET L T
Sbjct: 22 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 68
>SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)
Length = 330
Score = 29.1 bits (62), Expect = 4.4
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -3
Query: 280 LFCSVPHLLIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 137
L C ++ ++LSH + H L A +HG R +SCET L T
Sbjct: 103 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 149
>SB_58989| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 885
Score = 28.7 bits (61), Expect = 5.8
Identities = 12/39 (30%), Positives = 24/39 (61%)
Frame = -3
Query: 262 HLLIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL 146
H++ + ++SH +HH ++ + +HG R + SCE+ L
Sbjct: 470 HIITKNIVSHLEHHDILY-----KFQHGFRKLRSCESQL 503
>SB_29502| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 697
Score = 28.7 bits (61), Expect = 5.8
Identities = 22/71 (30%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
Frame = +3
Query: 492 RRHPSRLSLYASGRTTGI-VLDFRRRCLPHRAHLTKDTHSPTPSCVWDFSRFATSQTXFM 668
R+ PS L +S R + V R PHR ++ +HSP+ D S A +
Sbjct: 48 RKRPSSLGRDSSERRPSVRVSSDNSRSPPHRRDSSRRSHSPSRRSSDDRSTDARDRRDRR 107
Query: 669 KIPSTERRVXR 701
+ S ERR R
Sbjct: 108 RSSSRERRPPR 118
>SB_9283| Best HMM Match : DUF947 (HMM E-Value=0.3)
Length = 588
Score = 28.7 bits (61), Expect = 5.8
Identities = 25/94 (26%), Positives = 38/94 (40%)
Frame = +3
Query: 492 RRHPSRLSLYASGRTTGIVLDFRRRCLPHRAHLTKDTHSPTPSCVWDFSRFATSQTXFMK 671
+R RL+LY ++ +RR L + K+ HSP P C +F +
Sbjct: 99 QREKQRLALYFETKSEASSRVLKRRHLENNGKCKKNRHSP-PPCEVEFDKEGLLGEVNDM 157
Query: 672 IPSTERRVXRFNYQPPSXEIRFVSIQGRKLGLTF 773
+T++ V P + F S RK G TF
Sbjct: 158 ADNTQKCVYAIGLNPSN----FSSRSFRKGGATF 187
>SB_44229| Best HMM Match : DUF947 (HMM E-Value=0.67)
Length = 465
Score = 28.3 bits (60), Expect = 7.7
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = +3
Query: 492 RRHPSRLSLYASGRTTGIVLDFRRRCLPHRAHLTKDTHSPTPSCVWDFSR 641
+R RL+LY ++ +RR L + K HSP P C DF +
Sbjct: 146 QREKQRLALYFETKSEASSRVLKRRHLENNGKCKKKRHSP-PPCEVDFDK 194
>SB_23472| Best HMM Match : HIT (HMM E-Value=0.43)
Length = 168
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -3
Query: 262 HLLIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 137
H++ +++H D H ++ + +HG R SCET L T
Sbjct: 44 HIIFHDIMNHLDTHNILV-----KFQHGFRRFFSCETQLITT 80
>SB_23104| Best HMM Match : DUF947 (HMM E-Value=0.098)
Length = 807
Score = 28.3 bits (60), Expect = 7.7
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = +3
Query: 492 RRHPSRLSLYASGRTTGIVLDFRRRCLPHRAHLTKDTHSPTPSCVWDFSR 641
+R RL+LY ++ +RR L + K HSP P C DF +
Sbjct: 213 QREKQRLALYFKTKSEASSRVLKRRHLENNGKCKKKRHSP-PPCEVDFDK 261
>SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -1
Query: 189 GNTARGASSPAKPALHIPEPLSTT 118
GNT R AKPAL++P P S T
Sbjct: 40 GNTNRRTRIQAKPALNLPSPPSKT 63
>SB_18966| Best HMM Match : RVT_1 (HMM E-Value=0.028)
Length = 252
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -3
Query: 262 HLLIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 137
H++ +++H D H ++ + +HG R SCET L T
Sbjct: 89 HIIFHDIMNHLDTHNILV-----KFQHGFRRFFSCETQLITT 125
>SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -1
Query: 189 GNTARGASSPAKPALHIPEPLSTT 118
GNT R PAKP L IP P + T
Sbjct: 68 GNTNRRTRIPAKPTLTIPSPPTKT 91
>SB_6040| Best HMM Match : DUF947 (HMM E-Value=0.098)
Length = 405
Score = 28.3 bits (60), Expect = 7.7
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = +3
Query: 492 RRHPSRLSLYASGRTTGIVLDFRRRCLPHRAHLTKDTHSPTPSCVWDFSR 641
+R RL+LY ++ +RR L + K HSP P C DF +
Sbjct: 235 QREKQRLALYFKTKSEASSRVLKRRHLENNGKCKKKRHSP-PPCEVDFDK 283
>SB_45987| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1339
Score = 28.3 bits (60), Expect = 7.7
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = +3
Query: 492 RRHPSRLSLYASGRTTGIVLDFRRRCLPHRAHLTKDTHSPTPSCVWDFSR 641
+R RL+LY ++ +RR L + K HSP P C DF +
Sbjct: 288 QREKQRLALYFETKSEASSRVLKRRHLENNGKCKKKRHSP-PPCEVDFDK 336
>SB_25064| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1134
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -3
Query: 262 HLLIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 137
H++ +++H D H ++ + +HG R SCET L T
Sbjct: 673 HIIFHDIMNHIDTHNILV-----KFQHGFRRFFSCETQLITT 709
>SB_19427| Best HMM Match : RVT_1 (HMM E-Value=7.5e-32)
Length = 698
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -3
Query: 262 HLLIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 137
H++ +++H D H ++ + +HG R SCET L T
Sbjct: 292 HIIFHDIMNHLDTHNILV-----KFQHGFRRFFSCETQLITT 328
>SB_12041| Best HMM Match : PHD (HMM E-Value=0.001)
Length = 560
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -3
Query: 262 HLLIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 137
H++ +++H D H ++ + +HG R SCET L T
Sbjct: 503 HIIFHDIMNHLDTHNILV-----KFQHGFRRFFSCETQLITT 539
>SB_12008| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 979
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -3
Query: 262 HLLIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 137
H++ +++H D H ++ + +HG R SCET L T
Sbjct: 129 HIIFHDIMNHLDTHNILV-----KFQHGFRRFFSCETQLITT 165
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,225,271
Number of Sequences: 59808
Number of extensions: 691867
Number of successful extensions: 2512
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 2168
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2487
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2227723674
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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