Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0079
         (644 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000D55B1F Cluster: PREDICTED: similar to pleckstrin...    33   7.8  
UniRef50_Q4UH33 Cluster: Putative uncharacterized protein; n=4; ...    33   7.8  

>UniRef50_UPI0000D55B1F Cluster: PREDICTED: similar to pleckstrin
           homology-like domain, family B, member 2; n=1; Tribolium
           castaneum|Rep: PREDICTED: similar to pleckstrin
           homology-like domain, family B, member 2 - Tribolium
           castaneum
          Length = 1201

 Score = 32.7 bits (71), Expect = 7.8
 Identities = 14/31 (45%), Positives = 17/31 (54%)
 Frame = +3

Query: 510 PLPDGLATLGSXPACDIRVDATNCLFSSCNL 602
           P+P G  TLG  P  DIRV  T  L   C++
Sbjct: 46  PIPQGRVTLGCGPGVDIRVQGTGVLPLHCHI 76


>UniRef50_Q4UH33 Cluster: Putative uncharacterized protein; n=4;
            Theileria|Rep: Putative uncharacterized protein -
            Theileria annulata
          Length = 5145

 Score = 32.7 bits (71), Expect = 7.8
 Identities = 14/42 (33%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
 Frame = +3

Query: 312  YFLNLQINIFFHWREINRCQSSKVTFCFC-YKTKLLFINIVF 434
            YF ++ +N +++W  +   Q SK T  F  Y+ K+ F+N+ F
Sbjct: 1576 YFEDVMLNAYYNWNLLQESQMSKRTKGFIKYEIKMNFLNLTF 1617


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 584,854,210
Number of Sequences: 1657284
Number of extensions: 11160499
Number of successful extensions: 19533
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 19030
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19530
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48541014171
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)