Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0079
         (644 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_1170| Best HMM Match : No HMM Matches (HMM E-Value=.)               28   7.5  
SB_58702| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.059)          27   9.9  

>SB_1170| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 561

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 17/43 (39%), Positives = 24/43 (55%)
 Frame = -2

Query: 643 QYFVQXSXLACTNYRLHDENRQLVASTRISHAGSLPNVANPSG 515
           +  +Q     C NY  H++ R LV +TRI H   LP++ NP G
Sbjct: 132 ELLLQLIRYLCENYESHEKVRTLVDTTRI-HI--LPSI-NPDG 170


>SB_58702| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.059)
          Length = 765

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 14/47 (29%), Positives = 20/47 (42%)
 Frame = -2

Query: 637 FVQXSXLACTNYRLHDENRQLVASTRISHAGSLPNVANPSGNGTF*H 497
           +   S   CTN   H +++ + A+   SH G LP      G G   H
Sbjct: 487 YAPMSGACCTNPHCHGQHQAMYANPPPSHRGPLPPPHGMHGMGPSPH 533


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,367,501
Number of Sequences: 59808
Number of extensions: 351883
Number of successful extensions: 534
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 519
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 534
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1633044375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)