Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0076
         (800 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0051 - 355392-355450,355507-355634,356271-356425,356883-35...    28   7.5  
03_04_0206 - 18493178-18495310                                         28   7.5  
10_01_0117 + 1447741-1449123                                           28   9.9  
06_02_0046 + 10928708-10928798,10929997-10930077,10930567-109306...    28   9.9  
01_01_0758 + 5843702-5843874,5844021-5844083,5844174-5844290,584...    28   9.9  

>08_01_0051 -
           355392-355450,355507-355634,356271-356425,356883-357012,
           357600-357739,358384-358552,360286-360557
          Length = 350

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 12/21 (57%), Positives = 13/21 (61%), Gaps = 1/21 (4%)
 Frame = +2

Query: 602 PTPPTPPGEQWVPS-SPTKYE 661
           P PP  PG  WVP  S TKY+
Sbjct: 52  PPPPRGPGTTWVPQVSGTKYQ 72


>03_04_0206 - 18493178-18495310
          Length = 710

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 12/40 (30%), Positives = 20/40 (50%)
 Frame = -2

Query: 145 DAVVQFLLEFFVRTAHAYRGHFSDAGADGEHARREHHEKF 26
           + V   ++    +  H YRG+F D  +  E  R+E + KF
Sbjct: 364 NTVCNEIIHLHDKNLHVYRGNFDDFESGYEQKRKEMNRKF 403


>10_01_0117 + 1447741-1449123
          Length = 460

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 23/60 (38%), Positives = 28/60 (46%)
 Frame = -2

Query: 301 AVRCRPTACSSTPWCSTSVNDQVVNYILDDGALALVLVFQALTDSAVVVTGEDAVVQFLL 122
           A R    A +S P  S S +   V  +LDD   ALVLV   L + A+V  G  A    LL
Sbjct: 164 AARALAAAVASFPAASDSASASSV--LLDDVLAALVLV-MPLDEEAIVAIGSSAASVALL 220


>06_02_0046 +
           10928708-10928798,10929997-10930077,10930567-10930685,
           10931275-10931894,10931992-10933184,10933280-10933359,
           10933751-10933846,10933931-10934004,10936007-10936151,
           10936323-10936487
          Length = 887

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +2

Query: 590 LYSAPTPPTPPGEQWVPSSPTKYE 661
           L  +  PP PP ++W+P  P + E
Sbjct: 488 LEDSDIPPPPPEDEWIPPPPPENE 511


>01_01_0758 +
           5843702-5843874,5844021-5844083,5844174-5844290,
           5847180-5847945
          Length = 372

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +1

Query: 385 LALKLGPTLDPANERLAYGDGKEKNS 462
           +AL  GP L P N   A+G G E  S
Sbjct: 146 IALYSGPALSPLNHHRAFGGGAESGS 171


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,356,677
Number of Sequences: 37544
Number of extensions: 453771
Number of successful extensions: 1845
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1648
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1835
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2174172540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)