Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0076
         (800 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    26   1.2  
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    25   2.7  
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    24   6.3  
AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    23   8.3  
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    23   8.3  

>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 1222

 Score = 26.2 bits (55), Expect = 1.2
 Identities = 9/42 (21%), Positives = 23/42 (54%)
 Frame = +2

Query: 212 IIQNVVNNLIIDGSRTPWSTATSCGSATDSTLSESTSPITLD 337
           +++ ++++L  +     WS  ++ GS   +T +   +P+T D
Sbjct: 435 VLERIISDLFPEHPPCDWSQLSNVGSVEGATTTAGIAPVTDD 476


>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1168

 Score = 25.0 bits (52), Expect = 2.7
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +2

Query: 596  SAPTPPTPPGEQWVPSSPTKYE 661
            S P PP PP  + +P SP   E
Sbjct: 1103 SPPVPPIPPRSRRLPPSPRTTE 1124


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
           FGF-signaling promoter protein.
          Length = 1197

 Score = 23.8 bits (49), Expect = 6.3
 Identities = 8/9 (88%), Positives = 9/9 (100%)
 Frame = +2

Query: 596 SAPTPPTPP 622
           SAP+PPTPP
Sbjct: 73  SAPSPPTPP 81


>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 23.4 bits (48), Expect = 8.3
 Identities = 12/39 (30%), Positives = 20/39 (51%), Gaps = 3/39 (7%)
 Frame = +1

Query: 268 YCYKLWVGNG---QHIVRKYFPYNFRLIMAGNFVKLIYR 375
           Y  K+ +GN    +H  R+Y   N    ++G+FV   +R
Sbjct: 423 YGNKINIGNTYAEEHYYRRYLTANLSSDLSGDFVDAFFR 461


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 23.4 bits (48), Expect = 8.3
 Identities = 12/39 (30%), Positives = 20/39 (51%), Gaps = 3/39 (7%)
 Frame = +1

Query: 268 YCYKLWVGNG---QHIVRKYFPYNFRLIMAGNFVKLIYR 375
           Y  K+ +GN    +H  R+Y   N    ++G+FV   +R
Sbjct: 423 YGNKINIGNTYAEEHYYRRYLTANLSSDLSGDFVDAFFR 461


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 814,162
Number of Sequences: 2352
Number of extensions: 16701
Number of successful extensions: 45
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 45
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 84408009
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)