Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0076
         (800 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L35153-1|AAA64457.1|  857|Drosophila melanogaster polycomblike n...    31   2.4  
AY075585-1|AAL68389.1| 1043|Drosophila melanogaster SD09488p pro...    31   2.4  
AE013599-2620|AAF57748.2| 1043|Drosophila melanogaster CG5109-PA...    31   2.4  
AE014296-3356|AAF51592.1| 2284|Drosophila melanogaster CG5847-PA...    30   4.2  
AE014134-2265|AAF53230.1|  255|Drosophila melanogaster CG16800-P...    29   5.6  

>L35153-1|AAA64457.1|  857|Drosophila melanogaster polycomblike
           nuclear protein protein.
          Length = 857

 Score = 30.7 bits (66), Expect = 2.4
 Identities = 13/24 (54%), Positives = 15/24 (62%)
 Frame = +2

Query: 578 FKTVLYSAPTPPTPPGEQWVPSSP 649
           FKTV  + PTPPTPP     P +P
Sbjct: 317 FKTVEAAPPTPPTPPSPPPPPPAP 340


>AY075585-1|AAL68389.1| 1043|Drosophila melanogaster SD09488p
           protein.
          Length = 1043

 Score = 30.7 bits (66), Expect = 2.4
 Identities = 13/24 (54%), Positives = 15/24 (62%)
 Frame = +2

Query: 578 FKTVLYSAPTPPTPPGEQWVPSSP 649
           FKTV  + PTPPTPP     P +P
Sbjct: 317 FKTVEAAPPTPPTPPSPPPPPPAP 340


>AE013599-2620|AAF57748.2| 1043|Drosophila melanogaster CG5109-PA
           protein.
          Length = 1043

 Score = 30.7 bits (66), Expect = 2.4
 Identities = 13/24 (54%), Positives = 15/24 (62%)
 Frame = +2

Query: 578 FKTVLYSAPTPPTPPGEQWVPSSP 649
           FKTV  + PTPPTPP     P +P
Sbjct: 317 FKTVEAAPPTPPTPPSPPPPPPAP 340


>AE014296-3356|AAF51592.1| 2284|Drosophila melanogaster CG5847-PA
           protein.
          Length = 2284

 Score = 29.9 bits (64), Expect = 4.2
 Identities = 14/30 (46%), Positives = 16/30 (53%)
 Frame = -2

Query: 328 YRGSTF*QCAVRCRPTACSSTPWCSTSVND 239
           Y GST  +C  R RPT  +S P CS    D
Sbjct: 499 YPGSTDPECQPRTRPTITTSQPRCSQGSTD 528


>AE014134-2265|AAF53230.1|  255|Drosophila melanogaster CG16800-PA
           protein.
          Length = 255

 Score = 29.5 bits (63), Expect = 5.6
 Identities = 12/26 (46%), Positives = 13/26 (50%)
 Frame = -2

Query: 91  RGHFSDAGADGEHARREHHEKFHYDS 14
           +GH    G  GEH   E HEK H  S
Sbjct: 78  KGHHDKEGKKGEHGEEEGHEKKHKHS 103


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,373,542
Number of Sequences: 53049
Number of extensions: 767266
Number of successful extensions: 3297
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2990
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3292
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3736869864
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)