Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0075
         (650 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q2F5V8 Cluster: Stathmin; n=3; Endopterygota|Rep: Stath...    42   0.013
UniRef50_A1SPD1 Cluster: Sulfate transporter/antisigma-factor an...    35   1.5  
UniRef50_Q3JUF5 Cluster: Cell wall surface anchor family protein...    35   1.9  

>UniRef50_Q2F5V8 Cluster: Stathmin; n=3; Endopterygota|Rep: Stathmin
           - Bombyx mori (Silk moth)
          Length = 291

 Score = 41.9 bits (94), Expect = 0.013
 Identities = 23/49 (46%), Positives = 26/49 (53%)
 Frame = +3

Query: 3   FQQLESAIQEKLQQAADXXXXXXXXXXXXXXNHERRAEXVRQNKSARTE 149
           FQQLESAIQEKLQQAAD              NH  +   VR   +A+ E
Sbjct: 188 FQQLESAIQEKLQQAADRRLLIEAEQREKLRNHNIKLAEVRSAATAKVE 236



 Score = 35.1 bits (77), Expect = 1.5
 Identities = 20/49 (40%), Positives = 24/49 (48%)
 Frame = +3

Query: 6   QQLESAIQEKLQQAADXXXXXXXXXXXXXXNHERRAEXVRQNKSARTET 152
           +++   I+ KL  A                  ERRAE VRQNKSARTET
Sbjct: 236 EEITKDIENKLTTAELNREKEIQKKLDFVKKEERRAELVRQNKSARTET 284


>UniRef50_A1SPD1 Cluster: Sulfate transporter/antisigma-factor
           antagonist STAS; n=1; Nocardioides sp. JS614|Rep:
           Sulfate transporter/antisigma-factor antagonist STAS -
           Nocardioides sp. (strain BAA-499 / JS614)
          Length = 459

 Score = 35.1 bits (77), Expect = 1.5
 Identities = 27/73 (36%), Positives = 31/73 (42%), Gaps = 4/73 (5%)
 Frame = +2

Query: 5   PAARERHPGEAAAGRRPTSAH*X*AEREXT-QP*AARRAGPAEQER---PHRDRGPALLR 172
           P   + HP  AA G RP  A    A+R+   QP  A R   A  +    PHR RG  L  
Sbjct: 27  PPGPDPHP-RAALGARPRGARAARADRDRAEQPVPAARGAAAYVDGRVPPHRQRGGVLGE 85

Query: 173 LERGPPXQASHAH 211
             RGP   A   H
Sbjct: 86  RPRGPRPAAGRPH 98


>UniRef50_Q3JUF5 Cluster: Cell wall surface anchor family protein,
           putative; n=5; Burkholderia|Rep: Cell wall surface
           anchor family protein, putative - Burkholderia
           pseudomallei (strain 1710b)
          Length = 595

 Score = 34.7 bits (76), Expect = 1.9
 Identities = 26/73 (35%), Positives = 30/73 (41%)
 Frame = +2

Query: 5   PAARERHPGEAAAGRRPTSAH*X*AEREXTQP*AARRAGPAEQERPHRDRGPALLRLERG 184
           PA R R    +  GRRP       A R  T+  +ARR  P    R HR   PA   +  G
Sbjct: 46  PALRRRRAAVSPGGRRPRCGTGKTASRRRTRNDSARRR-PRGLRRLHRRAAPAF--VPAG 102

Query: 185 PPXQASHAHVTTV 223
            P  A  AH   V
Sbjct: 103 RPRAAGRAHAFAV 115


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 445,476,881
Number of Sequences: 1657284
Number of extensions: 6814494
Number of successful extensions: 15211
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 14808
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15199
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 48760335122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)