Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0074
         (754 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4XUQ8 Cluster: Putative uncharacterized protein; n=3; ...    35   2.5  
UniRef50_Q95U06 Cluster: GH16763p; n=1; Drosophila melanogaster|...    33   7.6  
UniRef50_Q7RFX7 Cluster: Putative uncharacterized protein PY0457...    33   7.6  
UniRef50_Q08550 Cluster: Meiotic plaque component protein 54; n=...    33   7.6  
UniRef50_Q2GR61 Cluster: Putative uncharacterized protein; n=1; ...    33   10.0 

>UniRef50_Q4XUQ8 Cluster: Putative uncharacterized protein; n=3;
           Plasmodium chabaudi|Rep: Putative uncharacterized
           protein - Plasmodium chabaudi
          Length = 543

 Score = 34.7 bits (76), Expect = 2.5
 Identities = 22/78 (28%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
 Frame = -1

Query: 259 IVRMRCVSEFVQ-SCISSSY-LYYFYTNKFFRMLTIICKFIKNKETVILKYIIFL*I*RN 86
           +++ +   E+V+ +C S    L YF+  K++++   IC F+K    +ILKY I++   + 
Sbjct: 335 VIKSKFRKEYVKDNCYSKQQILIYFF--KYYKVDKKICIFLKTIYLIILKYSIYVQNTKI 392

Query: 85  NIVYKTHYVYCIKKNNER 32
           +  + TH +   K+ NE+
Sbjct: 393 SNDFFTHNINTKKRQNEK 410


>UniRef50_Q95U06 Cluster: GH16763p; n=1; Drosophila
           melanogaster|Rep: GH16763p - Drosophila melanogaster
           (Fruit fly)
          Length = 385

 Score = 33.1 bits (72), Expect = 7.6
 Identities = 16/34 (47%), Positives = 16/34 (47%)
 Frame = +3

Query: 594 HRFSSVKSSFLSEKNTIGALSYVLQARAHIPSGL 695
           H   SVK SFL      G LSY    R H P GL
Sbjct: 298 HNHHSVKYSFLDPSKITGVLSYPWDYRRHFPQGL 331


>UniRef50_Q7RFX7 Cluster: Putative uncharacterized protein PY04575;
           n=3; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein PY04575 - Plasmodium yoelii yoelii
          Length = 1196

 Score = 33.1 bits (72), Expect = 7.6
 Identities = 21/67 (31%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
 Frame = -1

Query: 232 FVQSCISSSYLYYFYTNKFFRMLTIICK-FIKNKETV---ILKYIIFL*I*RNNIVYKTH 65
           ++Q+ +++SY+YYFY   +F+++  I   FI +K +V   +LK  +F  I  N+ +Y   
Sbjct: 211 YLQNKLNNSYIYYFY--NYFKIIKFINHYFILDKNSVDSKLLKQNVF--IYMNSNLYNII 266

Query: 64  YVYCIKK 44
           ++Y ++K
Sbjct: 267 FLYVLEK 273


>UniRef50_Q08550 Cluster: Meiotic plaque component protein 54; n=2;
           Saccharomyces cerevisiae|Rep: Meiotic plaque component
           protein 54 - Saccharomyces cerevisiae (Baker's yeast)
          Length = 464

 Score = 33.1 bits (72), Expect = 7.6
 Identities = 17/60 (28%), Positives = 27/60 (45%)
 Frame = +3

Query: 522 YENSHKISFYTDGFRLQVTSSTIQHRFSSVKSSFLSEKNTIGALSYVLQARAHIPSGLXT 701
           Y NSH IS Y D F  ++T S    RF     +   ++  +  ++     +  IPS + T
Sbjct: 15  YNNSHAISPYKDSFYKEMTPSKPNVRFGDDDVNIFDQRKKVNEINKNNTVKRSIPSSIST 74


>UniRef50_Q2GR61 Cluster: Putative uncharacterized protein; n=1;
            Chaetomium globosum|Rep: Putative uncharacterized protein
            - Chaetomium globosum (Soil fungus)
          Length = 4915

 Score = 32.7 bits (71), Expect = 10.0
 Identities = 17/52 (32%), Positives = 31/52 (59%)
 Frame = +3

Query: 525  ENSHKISFYTDGFRLQVTSSTIQHRFSSVKSSFLSEKNTIGALSYVLQARAH 680
            EN+  +S   D   +   S+ ++ +  ++K+S L +  TI A++ +LQARAH
Sbjct: 3820 ENASLLSLGLDSIDVIRLSALLRKKGVNIKTSDLMKAQTIAAITELLQARAH 3871


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 685,140,498
Number of Sequences: 1657284
Number of extensions: 13431415
Number of successful extensions: 30433
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 28929
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30414
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 62146450145
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)