Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0073
         (711 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    24   1.4  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    23   1.9  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    23   2.5  
EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine vasopre...    22   5.7  

>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = -3

Query: 616 NNPIRLTSSTSSPVGITKSRTWGQNSFY 533
           NNP  + S++S PVG T+      ++FY
Sbjct: 180 NNPCSINSTSSQPVG-TQIHQQTNHTFY 206


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 8/27 (29%), Positives = 16/27 (59%)
 Frame = -2

Query: 98  HLEHLSFSLNVSP*PRQDGQRE*NCRV 18
           HL+H  F+  ++   + +G R+  CR+
Sbjct: 476 HLQHQPFTYKITVNNQSNGNRKGTCRI 502


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -3

Query: 424 PCTHLTSPGLITSPGKCLMSKSLPSK 347
           PC +LTS  ++ S G  ++S  L +K
Sbjct: 33  PCVYLTSFSVVLSLGSFIVSVYLTTK 58


>EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine
           vasopressin-like peptide protein.
          Length = 146

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = -3

Query: 397 LITSPGKCLMSKSLPSKCLATN 332
           +ITS    ++S+SL S CL TN
Sbjct: 4   IITSIILLVLSESLVSGCLITN 25


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,636
Number of Sequences: 336
Number of extensions: 3153
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18843005
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)