Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0073
         (711 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY645021-1|AAT92557.1|  163|Anopheles gambiae even-skipped protein.    26   1.3  
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript...    25   2.3  
AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic acetylch...    24   5.4  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    23   9.5  

>AY645021-1|AAT92557.1|  163|Anopheles gambiae even-skipped protein.
          Length = 163

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 12/39 (30%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
 Frame = -3

Query: 466 FPFSKRFL*IGIP-SPCTHLTSPGLITSPGKCLMSKSLP 353
           +P  +R     +P +P T  T+PG+ ++P   L++ S+P
Sbjct: 8   YPLPQRTTATSLPVAPGTGPTTPGVYSAPNSMLVTGSMP 46


>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1049

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +1

Query: 10   HEMTRQFHSRCPSCLGQGET 69
            H   R   SRCP+C  + ET
Sbjct: 961  HRFNRASSSRCPACKDEDET 980


>AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic
           acetylcholine receptor subunitbeta 1 protein.
          Length = 519

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 14/50 (28%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
 Frame = +3

Query: 228 DYCVTTKTSEKFKRNGDNLIMKHEIT-LTEALCGFEFVAKHLDGRDLLIR 374
           D  +   +  +   + D++++  E +  TEA+   EF+A+HL   DL I+
Sbjct: 419 DLGIGADSCRRESESSDSILLSPEASKATEAV---EFIAEHLRNEDLYIQ 465


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
 Frame = -3

Query: 430 PSPCTHLTSP-GLITSPGKCLMSKSLPSKCLATNSKPHNASVSVIS 296
           PSP  HLTSP G   +      + + PS   AT + P +  V+  S
Sbjct: 717 PSPHHHLTSPHGAPLALTSSKSASTHPSPHPATRASPSSPIVATSS 762


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 661,494
Number of Sequences: 2352
Number of extensions: 13193
Number of successful extensions: 24
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 72758970
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)