Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0071
(599 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41542-4|AAK39154.1| 437|Caenorhabditis elegans Hypothetical pr... 129 1e-30
U41542-3|AAK39156.1| 403|Caenorhabditis elegans Hypothetical pr... 128 4e-30
U58751-7|AAB00658.2| 729|Caenorhabditis elegans Hepatocyte grow... 61 5e-10
U97407-8|AAN84851.1| 397|Caenorhabditis elegans Prion-like-(q/n... 40 0.001
U97407-7|AAB52480.2| 457|Caenorhabditis elegans Prion-like-(q/n... 40 0.001
Z81552-2|CAB04485.1| 331|Caenorhabditis elegans Hypothetical pr... 31 0.83
Z81552-1|CAB04484.1| 331|Caenorhabditis elegans Hypothetical pr... 31 0.83
X94702-1|CAA64363.1| 331|Caenorhabditis elegans pes-2 protein. 31 0.83
X94701-1|CAA64362.1| 331|Caenorhabditis elegans pes-2 protein. 31 0.83
Z75527-2|CAA99775.2| 636|Caenorhabditis elegans Hypothetical pr... 29 1.9
AF370361-1|AAK52514.1| 636|Caenorhabditis elegans putative tran... 29 1.9
AB096001-1|BAE53417.1| 676|Caenorhabditis elegans bHLH-PAS fact... 29 1.9
Z68014-4|CAA92026.2| 588|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z83116-9|CAD89748.1| 374|Caenorhabditis elegans Hypothetical pr... 28 4.4
U41277-5|AAA82476.2| 230|Caenorhabditis elegans Hypothetical pr... 28 5.9
U40417-5|AAM69085.1| 104|Caenorhabditis elegans Saposin-like pr... 28 5.9
>U41542-4|AAK39154.1| 437|Caenorhabditis elegans Hypothetical
protein C07A12.7a protein.
Length = 437
Score = 129 bits (312), Expect = 1e-30
Identities = 56/93 (60%), Positives = 72/93 (77%)
Frame = +1
Query: 256 TCVKNCGKPFHVLVCNKEFISELVKLIGPKNDPPTVVQDKVLSLIQCWADAFQNQAELQG 435
T VKNC FHVLVCNK+F+ +L+KLIGPK D P ++Q++VLSLIQ WADAF+ L G
Sbjct: 105 TAVKNCNHHFHVLVCNKDFVQDLIKLIGPKFDAPQIIQERVLSLIQAWADAFRGDPTLAG 164
Query: 436 VGQVYNELRTKGVEFPMTDLDAMGPIFTPQRSV 534
V Q Y++L++KGVEFP DLD + PI TP+R+V
Sbjct: 165 VVQSYDDLKSKGVEFPAADLDTLAPIKTPKRTV 197
Score = 103 bits (248), Expect = 7e-23
Identities = 49/76 (64%), Positives = 59/76 (77%), Gaps = 1/76 (1%)
Frame = +2
Query: 44 NPFSTPVGQKIEQATDG-ALPSENWALNMEICDIINSSTDGPKDAIKAIRKRLTTSAGKN 220
NPF+TPVG+KIE ATD L +ENW LNMEICD IN + DGP+DA++A++KRL + KN
Sbjct: 33 NPFATPVGRKIELATDANLLATENWGLNMEICDFINGTEDGPRDAVRALKKRLHNAMSKN 92
Query: 221 YTVVMYTLTVLEHA*K 268
VVMYTLTVLE A K
Sbjct: 93 NAVVMYTLTVLETAVK 108
>U41542-3|AAK39156.1| 403|Caenorhabditis elegans Hypothetical
protein C07A12.7b protein.
Length = 403
Score = 128 bits (308), Expect = 4e-30
Identities = 55/92 (59%), Positives = 71/92 (77%)
Frame = +1
Query: 256 TCVKNCGKPFHVLVCNKEFISELVKLIGPKNDPPTVVQDKVLSLIQCWADAFQNQAELQG 435
T VKNC FHVLVCNK+F+ +L+KLIGPK D P ++Q++VLSLIQ WADAF+ L G
Sbjct: 105 TAVKNCNHHFHVLVCNKDFVQDLIKLIGPKFDAPQIIQERVLSLIQAWADAFRGDPTLAG 164
Query: 436 VGQVYNELRTKGVEFPMTDLDAMGPIFTPQRS 531
V Q Y++L++KGVEFP DLD + PI TP+R+
Sbjct: 165 VVQSYDDLKSKGVEFPAADLDTLAPIKTPKRT 196
Score = 103 bits (248), Expect = 7e-23
Identities = 49/76 (64%), Positives = 59/76 (77%), Gaps = 1/76 (1%)
Frame = +2
Query: 44 NPFSTPVGQKIEQATDG-ALPSENWALNMEICDIINSSTDGPKDAIKAIRKRLTTSAGKN 220
NPF+TPVG+KIE ATD L +ENW LNMEICD IN + DGP+DA++A++KRL + KN
Sbjct: 33 NPFATPVGRKIELATDANLLATENWGLNMEICDFINGTEDGPRDAVRALKKRLHNAMSKN 92
Query: 221 YTVVMYTLTVLEHA*K 268
VVMYTLTVLE A K
Sbjct: 93 NAVVMYTLTVLETAVK 108
>U58751-7|AAB00658.2| 729|Caenorhabditis elegans Hepatocyte growth
factor-regulatedtk substrate (hrs) family protein 1
protein.
Length = 729
Score = 61.3 bits (142), Expect = 5e-10
Identities = 30/83 (36%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Frame = +1
Query: 259 CVKNCGKPFHVLVCNKEFISELVKLIGPKNDPPTVVQDKVLSLIQCWADAFQNQAELQGV 438
CVKNCG H V +EF+ + L+ + V++K L ++QCWA AF N+ E + V
Sbjct: 68 CVKNCGHKVHAEVATREFMEDFKNLV--TENKYDEVKNKSLEMLQCWATAFANKPEYKMV 125
Query: 439 GQVYNELRTKGVEFP-MTDLDAM 504
+N ++ G +FP + + DAM
Sbjct: 126 VDTHNLMKLAGFDFPSLKEADAM 148
Score = 37.5 bits (83), Expect = 0.007
Identities = 28/93 (30%), Positives = 44/93 (47%)
Frame = +2
Query: 53 STPVGQKIEQATDGALPSENWALNMEICDIINSSTDGPKDAIKAIRKRLTTSAGKNYTVV 232
+T + ++QATD L NW + D+I S K +++AIRKR+ +N VV
Sbjct: 2 ATKFQRVLDQATDSTLVEPNWEGIILCTDMIRSGEVPAKPSLQAIRKRM---QHENPHVV 58
Query: 233 MYTLTVLEHA*KTVESRSMFSSAIRNLYQSW*N 331
+TL VL+ K + A R + + N
Sbjct: 59 NHTLLVLDACVKNCGHKVHAEVATREFMEDFKN 91
>U97407-8|AAN84851.1| 397|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 19,
isoform b protein.
Length = 397
Score = 40.3 bits (90), Expect = 0.001
Identities = 21/59 (35%), Positives = 33/59 (55%)
Frame = +2
Query: 107 ENWALNMEICDIINSSTDGPKDAIKAIRKRLTTSAGKNYTVVMYTLTVLEHA*KTVESR 283
ENW + CD+IN+ +G K IK++RKRL ++ VV+ ++VL+ E R
Sbjct: 19 ENWEGILAFCDMINNDFEGSKTGIKSLRKRLN---NRDPHVVLLAISVLDSCWANCEER 74
Score = 27.5 bits (58), Expect = 7.7
Identities = 20/80 (25%), Positives = 34/80 (42%), Gaps = 1/80 (1%)
Frame = +1
Query: 256 TCVKNCGKPFHVLVCNKEFISELVKLIGPKNDPPTVVQDKVLSLIQCWADA-FQNQAELQ 432
+C NC + F V + +FI+EL L V +K+ +Q W D + + L
Sbjct: 66 SCWANCEERFRKEVSSAQFINELKALC---TSSQRQVAEKMRLTVQKWVDTECKTEQSLS 122
Query: 433 GVGQVYNELRTKGVEFPMTD 492
+ ++ L G F + D
Sbjct: 123 LIVTLHKNLVADGYSFVVDD 142
>U97407-7|AAB52480.2| 457|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 19,
isoform a protein.
Length = 457
Score = 40.3 bits (90), Expect = 0.001
Identities = 21/59 (35%), Positives = 33/59 (55%)
Frame = +2
Query: 107 ENWALNMEICDIINSSTDGPKDAIKAIRKRLTTSAGKNYTVVMYTLTVLEHA*KTVESR 283
ENW + CD+IN+ +G K IK++RKRL ++ VV+ ++VL+ E R
Sbjct: 27 ENWEGILAFCDMINNDFEGSKTGIKSLRKRLN---NRDPHVVLLAISVLDSCWANCEER 82
Score = 27.5 bits (58), Expect = 7.7
Identities = 20/80 (25%), Positives = 34/80 (42%), Gaps = 1/80 (1%)
Frame = +1
Query: 256 TCVKNCGKPFHVLVCNKEFISELVKLIGPKNDPPTVVQDKVLSLIQCWADA-FQNQAELQ 432
+C NC + F V + +FI+EL L V +K+ +Q W D + + L
Sbjct: 74 SCWANCEERFRKEVSSAQFINELKALC---TSSQRQVAEKMRLTVQKWVDTECKTEQSLS 130
Query: 433 GVGQVYNELRTKGVEFPMTD 492
+ ++ L G F + D
Sbjct: 131 LIVTLHKNLVADGYSFVVDD 150
>Z81552-2|CAB04485.1| 331|Caenorhabditis elegans Hypothetical
protein F56G4.3 protein.
Length = 331
Score = 30.7 bits (66), Expect = 0.83
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = -1
Query: 395 HWMRLNTLSCTTVGGSFLGPINFTNSDINSLLQTRTWNGFPQFF 264
HWM ++TL T L FTN DIN ++ F + F
Sbjct: 230 HWMTIDTLKDFTACSVILYDCKFTNKDINEFIKLWKNKEFERIF 273
>Z81552-1|CAB04484.1| 331|Caenorhabditis elegans Hypothetical
protein F56G4.2 protein.
Length = 331
Score = 30.7 bits (66), Expect = 0.83
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = -1
Query: 395 HWMRLNTLSCTTVGGSFLGPINFTNSDINSLLQTRTWNGFPQFF 264
HWM ++TL T L FTN DIN ++ F + F
Sbjct: 230 HWMTIDTLKDFTACSVILYDCKFTNKDINEFIKLWKNKEFERIF 273
>X94702-1|CAA64363.1| 331|Caenorhabditis elegans pes-2 protein.
Length = 331
Score = 30.7 bits (66), Expect = 0.83
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = -1
Query: 395 HWMRLNTLSCTTVGGSFLGPINFTNSDINSLLQTRTWNGFPQFF 264
HWM ++TL T L FTN DIN ++ F + F
Sbjct: 230 HWMTIDTLKDFTACSVILYDCKFTNKDINEFIKLWKNKEFERIF 273
>X94701-1|CAA64362.1| 331|Caenorhabditis elegans pes-2 protein.
Length = 331
Score = 30.7 bits (66), Expect = 0.83
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = -1
Query: 395 HWMRLNTLSCTTVGGSFLGPINFTNSDINSLLQTRTWNGFPQFF 264
HWM ++TL T L FTN DIN ++ F + F
Sbjct: 230 HWMTIDTLKDFTACSVILYDCKFTNKDINEFIKLWKNKEFERIF 273
>Z75527-2|CAA99775.2| 636|Caenorhabditis elegans Hypothetical
protein C15C8.2 protein.
Length = 636
Score = 29.5 bits (63), Expect = 1.9
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = +1
Query: 448 YNELRTKGVEFPMTDLDAMGPIFTPQRSVPDGRRTSWFPSXLP 576
YN+++ VE PM ++ P+FTP+ S P+ S S LP
Sbjct: 485 YNQIK---VEIPMRPINTQIPLFTPESSSPES-SASLHTSLLP 523
>AF370361-1|AAK52514.1| 636|Caenorhabditis elegans putative
transcription factor C15C8.2protein.
Length = 636
Score = 29.5 bits (63), Expect = 1.9
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = +1
Query: 448 YNELRTKGVEFPMTDLDAMGPIFTPQRSVPDGRRTSWFPSXLP 576
YN+++ VE PM ++ P+FTP+ S P+ S S LP
Sbjct: 485 YNQIK---VEIPMRPINTQIPLFTPESSSPES-SASLHTSLLP 523
>AB096001-1|BAE53417.1| 676|Caenorhabditis elegans bHLH-PAS factor
protein.
Length = 676
Score = 29.5 bits (63), Expect = 1.9
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = +1
Query: 448 YNELRTKGVEFPMTDLDAMGPIFTPQRSVPDGRRTSWFPSXLP 576
YN+++ VE PM ++ P+FTP+ S P+ S S LP
Sbjct: 485 YNQIK---VEIPMRPINTQIPLFTPESSSPES-SASLHTSLLP 523
>Z68014-4|CAA92026.2| 588|Caenorhabditis elegans Hypothetical
protein W04G3.4 protein.
Length = 588
Score = 28.7 bits (61), Expect = 3.3
Identities = 20/70 (28%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Frame = +1
Query: 262 VKNCGKPFHVLVCNKEFISELVKLIGPK-NDPPT--VVQDKVLSLIQCWADAFQNQAELQ 432
V+N G+ H +F++ELV+LI PK N T ++ +++ L+ W + ++ + +
Sbjct: 74 VRNGGEKVHERCGRYKFLNELVRLIAPKYNGKLTSDALKTEIIKLLFIWQLSIKHIPKYK 133
Query: 433 GVGQVYNELR 462
QVY L+
Sbjct: 134 ---QVYESLK 140
>Z83116-9|CAD89748.1| 374|Caenorhabditis elegans Hypothetical
protein M01B2.11 protein.
Length = 374
Score = 28.3 bits (60), Expect = 4.4
Identities = 9/16 (56%), Positives = 15/16 (93%)
Frame = +3
Query: 54 LRRWVKKLNKPQMAHY 101
++RWV+K+NKP++A Y
Sbjct: 156 MKRWVEKINKPRVAIY 171
>U41277-5|AAA82476.2| 230|Caenorhabditis elegans Hypothetical
protein C06E4.7 protein.
Length = 230
Score = 27.9 bits (59), Expect = 5.9
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = -1
Query: 353 GSFLGPINFTNSDINSLLQTRT-WNGFPQFFTHV 255
GSFLG N+T D+N + + R+ +G FF V
Sbjct: 74 GSFLGSGNYTTEDVNGMKRARSVADGVNCFFNKV 107
>U40417-5|AAM69085.1| 104|Caenorhabditis elegans Saposin-like
protein family protein2 protein.
Length = 104
Score = 27.9 bits (59), Expect = 5.9
Identities = 14/55 (25%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +2
Query: 98 LPSENWALNMEICDIINSSTDGPKDA-IKAIRKRLTTSAGKNYTVVMYTLTVLEH 259
LP E +L ++C++ + DG D + +I+K T K + + + EH
Sbjct: 19 LPKERSSLGCQMCELAVKTYDGSADKDVTSIKKDFDTECKKLFHAIPFAPQECEH 73
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,112,802
Number of Sequences: 27780
Number of extensions: 380594
Number of successful extensions: 887
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 849
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 884
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1279376318
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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