Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0070
(765 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P03034 Cluster: Repressor protein CI; n=13; root|Rep: R... 145 9e-34
UniRef50_Q7Y2L1 Cluster: CI protein; n=14; root|Rep: CI protein ... 123 4e-27
UniRef50_Q2NTM3 Cluster: Phage repressor; n=1; Sodalis glossinid... 101 3e-20
UniRef50_Q9EYB2 Cluster: CI protein; n=3; Escherichia coli|Rep: ... 91 3e-17
UniRef50_Q9JFR8 Cluster: Nucleocapsid protein; n=1; Wheat rosett... 83 1e-14
UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: L... 72 1e-11
UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep: Bet... 72 1e-11
UniRef50_A4TNH4 Cluster: Prophage repressor protein; n=11; root|... 71 4e-11
UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1; ... 70 6e-11
UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular organ... 61 3e-08
UniRef50_A1TMK6 Cluster: Putative prophage repressor; n=1; Acido... 60 6e-08
UniRef50_P69202 Cluster: Repressor protein C2; n=11; root|Rep: R... 60 8e-08
UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3; Eukaryo... 59 1e-07
UniRef50_Q48LS2 Cluster: Repressor protein c2, putative; n=3; Ps... 58 2e-07
UniRef50_Q8HAG7 Cluster: C2; n=12; root|Rep: C2 - Bacteriophage ... 57 4e-07
UniRef50_A6VY63 Cluster: Putative prophage repressor; n=1; Marin... 56 1e-06
UniRef50_A3HPH2 Cluster: Putative prophage repressor; n=1; Pseud... 55 2e-06
UniRef50_A7FIY9 Cluster: Repressor protein C2; n=1; Yersinia pse... 55 2e-06
UniRef50_A1TMZ9 Cluster: Putative prophage repressor; n=1; Acido... 54 3e-06
UniRef50_A3LDY4 Cluster: Putative uncharacterized protein; n=2; ... 54 4e-06
UniRef50_UPI00005F9B06 Cluster: COG1974: SOS-response transcript... 53 7e-06
UniRef50_A3HNE3 Cluster: Putative prophage repressor; n=1; Pseud... 53 9e-06
UniRef50_Q8FET6 Cluster: Putative repressor protein of prophage;... 52 1e-05
UniRef50_A0VFN7 Cluster: Putative prophage repressor precursor; ... 52 2e-05
UniRef50_Q8GJK1 Cluster: HTH-type transcriptional regulator for ... 52 2e-05
UniRef50_Q48J39 Cluster: Peptidase, S24 family; n=3; Pseudomonas... 52 2e-05
UniRef50_Q669R9 Cluster: Beta-galactosidase; n=14; Yersinia|Rep:... 50 6e-05
UniRef50_Q87Y08 Cluster: Repressor protein cI; n=3; Pseudomonas|... 50 8e-05
UniRef50_Q94MM0 Cluster: Repressor protein cI; n=1; Bordetella p... 49 1e-04
UniRef50_Q87ZK3 Cluster: Repressor protein c2; n=3; Pseudomonas|... 49 1e-04
UniRef50_Q4ZMI9 Cluster: Helix-turn-helix motif:Peptidase S24, S... 47 6e-04
UniRef50_Q1I888 Cluster: Putative transcriptional regulator, Cro... 47 6e-04
UniRef50_Q88FM1 Cluster: Transcriptional regulator, Cro/CI famil... 45 0.002
UniRef50_Q4K9P3 Cluster: Transcriptional regulator, Cro/CI famil... 44 0.003
UniRef50_A3UVL9 Cluster: Putative repressor protein of prophage;... 44 0.005
UniRef50_Q12CJ3 Cluster: Putative prophage repressor; n=1; Polar... 43 0.007
UniRef50_UPI00003976F6 Cluster: COG1974: SOS-response transcript... 43 0.010
UniRef50_Q5P987 Cluster: Putative bacteriophage-related transcri... 43 0.010
UniRef50_UPI00005F0B50 Cluster: COG1974: SOS-response transcript... 40 0.051
UniRef50_A3LLR8 Cluster: Putative uncharacterized protein; n=2; ... 40 0.051
UniRef50_Q6J1N3 Cluster: Putative prophage repressor protein; n=... 39 0.16
UniRef50_A7MN76 Cluster: Putative uncharacterized protein; n=1; ... 38 0.27
UniRef50_Q8X5F7 Cluster: Putative repressor protein encoded with... 38 0.36
UniRef50_A0HIU5 Cluster: Putative prophage repressor; n=1; Comam... 38 0.36
UniRef50_Q2SPC6 Cluster: SOS-response transcriptional repressors... 37 0.63
UniRef50_A2I308 Cluster: Putative repressor protein; n=1; Vibrio... 37 0.63
UniRef50_Q7WLR7 Cluster: Putative phage repressor; n=2; Proteoba... 36 0.83
UniRef50_A7JPM0 Cluster: Possible LexA family repressor/S24 fami... 36 1.1
UniRef50_P06219 Cluster: Beta-galactosidase; n=11; Gammaproteoba... 36 1.1
UniRef50_Q7Y2L0 Cluster: Putative uncharacterized protein; n=2; ... 36 1.5
UniRef50_Q6ALL6 Cluster: Related to repressor protein; n=1; Desu... 35 1.9
UniRef50_A4SLB7 Cluster: Phage repressor; n=1; Aeromonas salmoni... 35 2.5
UniRef50_Q90XY7 Cluster: Putative uncharacterized protein; n=2; ... 34 3.4
UniRef50_Q4S2U6 Cluster: Chromosome 17 SCAF14760, whole genome s... 34 3.4
UniRef50_Q01XR3 Cluster: Major facilitator superfamily MFS_1; n=... 34 3.4
UniRef50_P81650 Cluster: Beta-galactosidase; n=26; Gammaproteoba... 34 3.4
UniRef50_A7JW81 Cluster: Possible LexA family repressor/S24 fami... 34 4.4
UniRef50_A3L6T1 Cluster: Lactoylglutathione lyase and related ly... 33 5.9
UniRef50_Q48JQ8 Cluster: Prophage PSPPH03, transcriptional regul... 33 7.8
UniRef50_Q15XN9 Cluster: Glycoside hydrolase family 2, TIM barre... 33 7.8
UniRef50_A6GJ84 Cluster: Putative uncharacterized protein; n=1; ... 33 7.8
UniRef50_A3FKJ8 Cluster: Cation-transporting ATPase; n=1; Toxopl... 33 7.8
>UniRef50_P03034 Cluster: Repressor protein CI; n=13; root|Rep:
Repressor protein CI - Bacteriophage lambda
Length = 237
Score = 145 bits (352), Expect = 9e-34
Identities = 72/86 (83%), Positives = 72/86 (83%)
Frame = +1
Query: 4 DKMGMGQSGVGALFNGIXXXXXXXXXXXTKILKVSVEEFSPSIAREIYEMYEAVSMQPSL 183
DKMGMGQSGVGALFNGI KILKVSVEEFSPSIAREIYEMYEAVSMQPSL
Sbjct: 39 DKMGMGQSGVGALFNGINALNAYNAALLAKILKVSVEEFSPSIAREIYEMYEAVSMQPSL 98
Query: 184 RSEYEYPVFSHVQAGMFSPELRTLPK 261
RSEYEYPVFSHVQAGMFSPELRT K
Sbjct: 99 RSEYEYPVFSHVQAGMFSPELRTFTK 124
Score = 128 bits (310), Expect = 1e-28
Identities = 60/62 (96%), Positives = 60/62 (96%)
Frame = +3
Query: 255 TKGDAERWVSTTKKASDSAFWLEVEGNSMTAPTGSKPSFPDGMLILVDPEQAVEPGDFWG 434
TKGDAERWVSTTKKASDSAFWLEVEGNSMTAPTGSKPSFPDGMLILVDPEQAVEPGDF
Sbjct: 123 TKGDAERWVSTTKKASDSAFWLEVEGNSMTAPTGSKPSFPDGMLILVDPEQAVEPGDFCI 182
Query: 435 AR 440
AR
Sbjct: 183 AR 184
>UniRef50_Q7Y2L1 Cluster: CI protein; n=14; root|Rep: CI protein -
Stx2 converting phage II
Length = 231
Score = 123 bits (297), Expect = 4e-27
Identities = 59/62 (95%), Positives = 59/62 (95%)
Frame = +3
Query: 255 TKGDAERWVSTTKKASDSAFWLEVEGNSMTAPTGSKPSFPDGMLILVDPEQAVEPGDFWG 434
TKGDAER VSTTKKASDSAFWLEVEGNSMTAPTGSKPSFPDGMLILVDPEQAVEPGDF
Sbjct: 117 TKGDAERLVSTTKKASDSAFWLEVEGNSMTAPTGSKPSFPDGMLILVDPEQAVEPGDFCI 176
Query: 435 AR 440
AR
Sbjct: 177 AR 178
Score = 53.2 bits (122), Expect = 7e-06
Identities = 32/86 (37%), Positives = 42/86 (48%)
Frame = +1
Query: 4 DKMGMGQSGVGALFNGIXXXXXXXXXXXTKILKVSVEEFSPSIAREIYEMYEAVSMQPSL 183
+++GM Q G+G G K L + F+ + S P +
Sbjct: 37 EELGMTQGGIGHWLRGSRHPSLSDIGVVFKYLGIDNISFNHD---GTFSPVGEYSSAP-V 92
Query: 184 RSEYEYPVFSHVQAGMFSPELRTLPK 261
+ +YEYPVFSHVQAGMFSPELRT K
Sbjct: 93 KKQYEYPVFSHVQAGMFSPELRTFTK 118
>UniRef50_Q2NTM3 Cluster: Phage repressor; n=1; Sodalis glossinidius
str. 'morsitans'|Rep: Phage repressor - Sodalis
glossinidius (strain morsitans)
Length = 240
Score = 101 bits (241), Expect = 3e-20
Identities = 43/55 (78%), Positives = 51/55 (92%)
Frame = +3
Query: 264 DAERWVSTTKKASDSAFWLEVEGNSMTAPTGSKPSFPDGMLILVDPEQAVEPGDF 428
DA WVSTT+KASD+AFWLEVEG+SMT+P GS+PSFP+GMLILVDP++ VEPGDF
Sbjct: 129 DARDWVSTTRKASDNAFWLEVEGHSMTSPAGSRPSFPEGMLILVDPKELVEPGDF 183
Score = 52.4 bits (120), Expect = 1e-05
Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 4/95 (4%)
Frame = +1
Query: 4 DKMGMGQSGVGALFNGIXXXXXXXXXXXTKILKVSVEEFSPSIAREI--YEMYEAVSM-- 171
D +G+ Q VG NG +LKVS+ +FSPS+A+ I Y + A +
Sbjct: 38 DHLGISQGAVGHYLNGRNPLNVPIASEFASLLKVSIGDFSPSLAQTISQYLINNASNACN 97
Query: 172 QPSLRSEYEYPVFSHVQAGMFSPELRTLPKVMRRD 276
+ + Y+YP+FS +QAG F+ E + RD
Sbjct: 98 MSAFKKAYDYPLFSTIQAGFFTNEAKAFSLSDARD 132
>UniRef50_Q9EYB2 Cluster: CI protein; n=3; Escherichia coli|Rep: CI
protein - Escherichia coli O157:H7
Length = 212
Score = 91.1 bits (216), Expect = 3e-17
Identities = 40/58 (68%), Positives = 47/58 (81%)
Frame = +3
Query: 255 TKGDAERWVSTTKKASDSAFWLEVEGNSMTAPTGSKPSFPDGMLILVDPEQAVEPGDF 428
T DA+ WV TT KAS+ AFWLEV+G+SMTAP G +PSFP+GMLILVDP + VE GDF
Sbjct: 97 TASDAKAWVPTTTKASEKAFWLEVKGHSMTAPQGVRPSFPEGMLILVDPAEPVESGDF 154
>UniRef50_Q9JFR8 Cluster: Nucleocapsid protein; n=1; Wheat rosette
stunt virus|Rep: Nucleocapsid protein - Wheat rosette
stunt virus
Length = 402
Score = 82.6 bits (195), Expect = 1e-14
Identities = 37/38 (97%), Positives = 37/38 (97%)
Frame = +3
Query: 255 TKGDAERWVSTTKKASDSAFWLEVEGNSMTAPTGSKPS 368
TKGDAERWVSTTKKASDSAFWLEVEGNSMTAP GSKPS
Sbjct: 3 TKGDAERWVSTTKKASDSAFWLEVEGNSMTAPNGSKPS 40
>UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: LacZ
protein - Phage M13mp18
Length = 102
Score = 72.1 bits (169), Expect = 1e-11
Identities = 36/44 (81%), Positives = 36/44 (81%), Gaps = 1/44 (2%)
Frame = +1
Query: 508 ENPGVTQLNRLAAHPPFASWRNSEEGPHRFALP-QQXRSLNGEW 636
ENPGVTQLNRLAAHPPFASWRNSEE R P QQ RSLNGEW
Sbjct: 36 ENPGVTQLNRLAAHPPFASWRNSEEA--RTDRPSQQLRSLNGEW 77
>UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep:
Beta-galactosidase - Escherichia coli (strain K12)
Length = 1024
Score = 72.1 bits (169), Expect = 1e-11
Identities = 36/44 (81%), Positives = 36/44 (81%), Gaps = 1/44 (2%)
Frame = +1
Query: 508 ENPGVTQLNRLAAHPPFASWRNSEEGPHRFALP-QQXRSLNGEW 636
ENPGVTQLNRLAAHPPFASWRNSEE R P QQ RSLNGEW
Sbjct: 18 ENPGVTQLNRLAAHPPFASWRNSEEA--RTDRPSQQLRSLNGEW 59
>UniRef50_A4TNH4 Cluster: Prophage repressor protein; n=11;
root|Rep: Prophage repressor protein - Yersinia pestis
(strain Pestoides F)
Length = 240
Score = 70.5 bits (165), Expect = 4e-11
Identities = 33/58 (56%), Positives = 43/58 (74%)
Frame = +3
Query: 255 TKGDAERWVSTTKKASDSAFWLEVEGNSMTAPTGSKPSFPDGMLILVDPEQAVEPGDF 428
T D E W +TK A +SAFWL V+G+SMT+P+G SFP+GM+ILVDPE+ PG+F
Sbjct: 129 TLRDIEIWPESTKHAHESAFWLSVKGDSMTSPSGI--SFPEGMIILVDPEKEPMPGNF 184
Score = 45.6 bits (103), Expect = 0.001
Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 8/82 (9%)
Frame = +1
Query: 7 KMGMGQSGVGALFNGIXXXXXXXXXXXTKILKVSVEEFSPSIAREIYEMYEAVSM----- 171
++G+GQS V NG+ K+L + FSPS+A+E+ +M E++S+
Sbjct: 38 ELGVGQSAVNQFLNGVNPLNITNAAAFAKVLNEPISSFSPSLAKELAKMAESLSITTRSG 97
Query: 172 ---QPSLRSEYEYPVFSHVQAG 228
+P++ YP+ S + AG
Sbjct: 98 AKDKPAVSVANSYPLISWISAG 119
>UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1;
Erwinia amylovora|Rep: Putative uncharacterized protein
- Erwinia amylovora (Fire blight bacteria)
Length = 123
Score = 70.1 bits (164), Expect = 6e-11
Identities = 35/44 (79%), Positives = 35/44 (79%), Gaps = 1/44 (2%)
Frame = +1
Query: 508 ENPGVTQLNRLAAHPPFASWRNSEEGPHRFALP-QQXRSLNGEW 636
ENPGVTQLNRLAAHPPFASWRNSEE R P QQ R LNGEW
Sbjct: 78 ENPGVTQLNRLAAHPPFASWRNSEEA--RTDRPSQQLRXLNGEW 119
>UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular
organisms|Rep: LacZ-alpha peptide - Escherichia coli
Length = 90
Score = 60.9 bits (141), Expect = 3e-08
Identities = 32/40 (80%), Positives = 32/40 (80%), Gaps = 1/40 (2%)
Frame = +1
Query: 508 ENPGVTQLNRLAAHPPFASWRNSEEGPHRFALP-QQXRSL 624
ENPGVTQLNRLAAHPPFASWRNSEE R P QQ RSL
Sbjct: 32 ENPGVTQLNRLAAHPPFASWRNSEEA--RTDRPSQQLRSL 69
>UniRef50_A1TMK6 Cluster: Putative prophage repressor; n=1;
Acidovorax avenae subsp. citrulli AAC00-1|Rep: Putative
prophage repressor - Acidovorax avenae subsp. citrulli
(strain AAC00-1)
Length = 221
Score = 60.1 bits (139), Expect = 6e-08
Identities = 26/60 (43%), Positives = 36/60 (60%)
Frame = +3
Query: 249 NLTKGDAERWVSTTKKASDSAFWLEVEGNSMTAPTGSKPSFPDGMLILVDPEQAVEPGDF 428
N GDA+ W + D + L V G+SMTAP GS SFP+G+L+ V+P++ PG F
Sbjct: 104 NFQPGDADEWPPSHHNLGDCGYMLRVHGDSMTAPAGSPYSFPEGVLLHVNPDKEPTPGQF 163
>UniRef50_P69202 Cluster: Repressor protein C2; n=11; root|Rep:
Repressor protein C2 - Bacteriophage P22
Length = 216
Score = 59.7 bits (138), Expect = 8e-08
Identities = 29/50 (58%), Positives = 36/50 (72%)
Frame = +3
Query: 270 ERWVSTTKKASDSAFWLEVEGNSMTAPTGSKPSFPDGMLILVDPEQAVEP 419
E W TT S+ +FWL+V+G+SMTAP G S P+GM+ILVDPE VEP
Sbjct: 110 ENWHDTTVDCSEDSFWLDVQGDSMTAPAGL--SIPEGMIILVDPE--VEP 155
>UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3;
Eukaryota|Rep: beta-galactosidase - Entamoeba
histolytica HM-1:IMSS
Length = 86
Score = 58.8 bits (136), Expect = 1e-07
Identities = 27/31 (87%), Positives = 29/31 (93%)
Frame = +2
Query: 509 KTLALPNLIALQHIPLSPAGVIAKRARTDSP 601
KTLALPNLIALQHIPLSPAGVI++ ARTD P
Sbjct: 16 KTLALPNLIALQHIPLSPAGVISEEARTDRP 46
Score = 35.9 bits (79), Expect = 1.1
Identities = 18/53 (33%), Positives = 20/53 (37%)
Frame = +3
Query: 477 HWPSFYNVVTGKPWRYPT*SPCSTSPFRQLAXXXXXXXXXXXXXTVXQLEWRM 635
HWPSFYNVVTGK P P + L+WRM
Sbjct: 5 HWPSFYNVVTGKTLALPNLIALQHIPLSPAGVISEEARTDRPSQQLRSLKWRM 57
>UniRef50_Q48LS2 Cluster: Repressor protein c2, putative; n=3;
Pseudomonas syringae group|Rep: Repressor protein c2,
putative - Pseudomonas syringae pv. phaseolicola (strain
1448A / Race 6)
Length = 308
Score = 58.4 bits (135), Expect = 2e-07
Identities = 30/62 (48%), Positives = 41/62 (66%)
Frame = +3
Query: 261 GDAERWVSTTKKASDSAFWLEVEGNSMTAPTGSKPSFPDGMLILVDPEQAVEPGDFWGAR 440
G ++R+ + + AFWLEV+G+SMTAPTG S P+GM+ILVD E V+PG A+
Sbjct: 201 GFSDRYEISDYDSKGPAFWLEVKGDSMTAPTG--VSVPEGMMILVDTEADVQPGKLVIAK 258
Query: 441 YP 446
P
Sbjct: 259 LP 260
>UniRef50_Q8HAG7 Cluster: C2; n=12; root|Rep: C2 - Bacteriophage
ST64T
Length = 234
Score = 57.2 bits (132), Expect = 4e-07
Identities = 29/52 (55%), Positives = 36/52 (69%)
Frame = +3
Query: 264 DAERWVSTTKKASDSAFWLEVEGNSMTAPTGSKPSFPDGMLILVDPEQAVEP 419
+ E W TT AS+ +FWL V G+SMT+PTG S P+GM ILVDP A+EP
Sbjct: 127 EIEVWPETTAHASERSFWLTVRGDSMTSPTGL--SIPEGMQILVDP--AIEP 174
>UniRef50_A6VY63 Cluster: Putative prophage repressor; n=1;
Marinomonas sp. MWYL1|Rep: Putative prophage repressor -
Marinomonas sp. MWYL1
Length = 216
Score = 55.6 bits (128), Expect = 1e-06
Identities = 28/61 (45%), Positives = 38/61 (62%), Gaps = 2/61 (3%)
Frame = +3
Query: 249 NLTKGDAER--WVSTTKKASDSAFWLEVEGNSMTAPTGSKPSFPDGMLILVDPEQAVEPG 422
N+T D + W+ T + S SAFWL V G+SM +P+G+ S P+G LILVDP + G
Sbjct: 103 NITDLDERKFDWIETPESTSKSAFWLNVVGDSMMSPSGT--SVPEGYLILVDPSLTAKNG 160
Query: 423 D 425
D
Sbjct: 161 D 161
>UniRef50_A3HPH2 Cluster: Putative prophage repressor; n=1;
Pseudomonas putida GB-1|Rep: Putative prophage repressor
- Pseudomonas putida (strain GB-1)
Length = 268
Score = 55.2 bits (127), Expect = 2e-06
Identities = 27/56 (48%), Positives = 36/56 (64%)
Frame = +3
Query: 264 DAERWVSTTKKASDSAFWLEVEGNSMTAPTGSKPSFPDGMLILVDPEQAVEPGDFW 431
DAE W+S+T+ A + FWL V G+SMT PSFP+G LILV PE + G ++
Sbjct: 162 DAE-WLSSTESAGANGFWLRVRGDSMTC--AGNPSFPEGSLILVRPEADIVSGKYY 214
>UniRef50_A7FIY9 Cluster: Repressor protein C2; n=1; Yersinia
pseudotuberculosis IP 31758|Rep: Repressor protein C2 -
Yersinia pseudotuberculosis IP 31758
Length = 236
Score = 54.8 bits (126), Expect = 2e-06
Identities = 26/46 (56%), Positives = 31/46 (67%)
Frame = +3
Query: 264 DAERWVSTTKKASDSAFWLEVEGNSMTAPTGSKPSFPDGMLILVDP 401
D RW STT K SDSAF L+V G SMT P G PS P+G ++V+P
Sbjct: 126 DVLRWCSTTVKVSDSAFALDVRGESMTNPNG-LPSIPEGSTVIVEP 170
>UniRef50_A1TMZ9 Cluster: Putative prophage repressor; n=1;
Acidovorax avenae subsp. citrulli AAC00-1|Rep: Putative
prophage repressor - Acidovorax avenae subsp. citrulli
(strain AAC00-1)
Length = 230
Score = 54.4 bits (125), Expect = 3e-06
Identities = 22/56 (39%), Positives = 34/56 (60%)
Frame = +3
Query: 261 GDAERWVSTTKKASDSAFWLEVEGNSMTAPTGSKPSFPDGMLILVDPEQAVEPGDF 428
GDAE W + + F L++EG+SMT P G + +FP+GM + + P +PGD+
Sbjct: 119 GDAEDWQDSPVDLGPNGFVLKLEGSSMTNPAGGRDNFPEGMYVHIHPGVEAQPGDY 174
>UniRef50_A3LDY4 Cluster: Putative uncharacterized protein; n=2;
Pseudomonas aeruginosa 2192|Rep: Putative
uncharacterized protein - Pseudomonas aeruginosa 2192
Length = 253
Score = 54.0 bits (124), Expect = 4e-06
Identities = 25/52 (48%), Positives = 32/52 (61%)
Frame = +3
Query: 249 NLTKGDAERWVSTTKKASDSAFWLEVEGNSMTAPTGSKPSFPDGMLILVDPE 404
N GDAE W+ + KA ++ +WLEV G+SM PSFP+G ILV PE
Sbjct: 139 NFQPGDAEEWIESEAKAGENGYWLEVHGDSML------PSFPEGTRILVQPE 184
>UniRef50_UPI00005F9B06 Cluster: COG1974: SOS-response
transcriptional repressors (RecA-mediated
autopeptidases); n=1; Yersinia frederiksenii ATCC
33641|Rep: COG1974: SOS-response transcriptional
repressors (RecA-mediated autopeptidases) - Yersinia
frederiksenii ATCC 33641
Length = 234
Score = 53.2 bits (122), Expect = 7e-06
Identities = 24/46 (52%), Positives = 32/46 (69%)
Frame = +3
Query: 264 DAERWVSTTKKASDSAFWLEVEGNSMTAPTGSKPSFPDGMLILVDP 401
D RW +TT K S++AF L+V G SMT P GS PS P+G ++V+P
Sbjct: 124 DVLRWCTTTVKVSENAFALDVRGESMTNPNGS-PSIPEGSTVIVEP 168
>UniRef50_A3HNE3 Cluster: Putative prophage repressor; n=1;
Pseudomonas putida GB-1|Rep: Putative prophage repressor
- Pseudomonas putida (strain GB-1)
Length = 228
Score = 52.8 bits (121), Expect = 9e-06
Identities = 26/48 (54%), Positives = 32/48 (66%)
Frame = +3
Query: 297 ASDSAFWLEVEGNSMTAPTGSKPSFPDGMLILVDPEQAVEPGDFWGAR 440
A + AFWL V G+SMT +GS PSFP+G LIL+ P+ PG F AR
Sbjct: 128 AGEDAFWLRVIGDSMTLSSGS-PSFPEGFLILIAPDIEPRPGQFVVAR 174
>UniRef50_Q8FET6 Cluster: Putative repressor protein of prophage;
n=1; Escherichia coli O6|Rep: Putative repressor protein
of prophage - Escherichia coli O6
Length = 208
Score = 52.4 bits (120), Expect = 1e-05
Identities = 24/59 (40%), Positives = 37/59 (62%)
Frame = +3
Query: 264 DAERWVSTTKKASDSAFWLEVEGNSMTAPTGSKPSFPDGMLILVDPEQAVEPGDFWGAR 440
+ ++WV T+ K D++F LEV+G+SMT P G P+ P+G ++VDP+ G AR
Sbjct: 101 EVDKWVDTSLKVGDNSFALEVKGDSMTNPNG-LPTIPEGATVIVDPDAEPRHGKIVIAR 158
>UniRef50_A0VFN7 Cluster: Putative prophage repressor precursor;
n=1; Delftia acidovorans SPH-1|Rep: Putative prophage
repressor precursor - Delftia acidovorans SPH-1
Length = 229
Score = 52.0 bits (119), Expect = 2e-05
Identities = 25/59 (42%), Positives = 32/59 (54%)
Frame = +3
Query: 249 NLTKGDAERWVSTTKKASDSAFWLEVEGNSMTAPTGSKPSFPDGMLILVDPEQAVEPGD 425
N GDA W+ K F L VEG SM+ P G PS+ G +I VDP ++ +PGD
Sbjct: 115 NFQPGDASEWIPCPAKHGPHTFALTVEGESMSNP-GVHPSYEPGNIIFVDPGRSAQPGD 172
>UniRef50_Q8GJK1 Cluster: HTH-type transcriptional regulator for
conjugative element pMERPH; n=9;
Gammaproteobacteria|Rep: HTH-type transcriptional
regulator for conjugative element pMERPH - Shewanella
putrefaciens (Pseudomonas putrefaciens)
Length = 215
Score = 52.0 bits (119), Expect = 2e-05
Identities = 27/59 (45%), Positives = 34/59 (57%)
Frame = +3
Query: 264 DAERWVSTTKKASDSAFWLEVEGNSMTAPTGSKPSFPDGMLILVDPEQAVEPGDFWGAR 440
DAE W T KA + F L V+G+SM P+G K S P+G +I+VDPE G AR
Sbjct: 107 DAEEWREVTGKAHEGCFALRVKGDSMENPSGKK-SIPEGAVIVVDPELPYSSGSLVVAR 164
>UniRef50_Q48J39 Cluster: Peptidase, S24 family; n=3; Pseudomonas
syringae group|Rep: Peptidase, S24 family - Pseudomonas
syringae pv. phaseolicola (strain 1448A / Race 6)
Length = 240
Score = 51.6 bits (118), Expect = 2e-05
Identities = 27/54 (50%), Positives = 35/54 (64%)
Frame = +3
Query: 261 GDAERWVSTTKKASDSAFWLEVEGNSMTAPTGSKPSFPDGMLILVDPEQAVEPG 422
G ++R+ + KA AFWLEV+G+SMT+ S PS P+G ILVD E V PG
Sbjct: 132 GFSDRYDVSDYKAKGPAFWLEVKGDSMTST--SAPSIPEGSQILVDTEADVRPG 183
>UniRef50_Q669R9 Cluster: Beta-galactosidase; n=14; Yersinia|Rep:
Beta-galactosidase - Yersinia pseudotuberculosis
Length = 1066
Score = 50.0 bits (114), Expect = 6e-05
Identities = 23/44 (52%), Positives = 29/44 (65%)
Frame = +1
Query: 508 ENPGVTQLNRLAAHPPFASWRNSEEGPHRFALPQQXRSLNGEWA 639
ENP +TQ +RL AHPPF SWR+ E PQQ ++LNG W+
Sbjct: 25 ENPQITQYHRLEAHPPFHSWRDVESAQKDRPSPQQ-QTLNGLWS 67
>UniRef50_Q87Y08 Cluster: Repressor protein cI; n=3;
Pseudomonas|Rep: Repressor protein cI - Pseudomonas
syringae pv. tomato
Length = 234
Score = 49.6 bits (113), Expect = 8e-05
Identities = 25/61 (40%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Frame = +3
Query: 261 GDAERWVSTTKKASDSAFWLEVEGNSMTAPTGSKPSFPDGMLILVDPEQ-AVEPGDFWGA 437
G ++ W+S+T+ A +WL V+G SMT+ T P+FP+G IL+ PE + G F+ A
Sbjct: 125 GISDEWLSSTESAGPKGYWLRVKGKSMTSDT--PPTFPEGTPILIRPEGFDLISGKFYVA 182
Query: 438 R 440
R
Sbjct: 183 R 183
Score = 39.9 bits (89), Expect = 0.068
Identities = 23/72 (31%), Positives = 31/72 (43%)
Frame = +1
Query: 13 GMGQSGVGALFNGIXXXXXXXXXXXTKILKVSVEEFSPSIAREIYEMYEAVSMQPSLRSE 192
G+ + V GI K+L+ +E FSP +A EI EM M R
Sbjct: 42 GITPASVNQYLRGINPLNARFAAVLAKMLEEPIESFSPRLATEISEMANVGPMTQPRREA 101
Query: 193 YEYPVFSHVQAG 228
EYP+ + V AG
Sbjct: 102 TEYPLITWVDAG 113
>UniRef50_Q94MM0 Cluster: Repressor protein cI; n=1; Bordetella
phage BPP-1|Rep: Repressor protein cI - Bordetella phage
BPP-1
Length = 223
Score = 49.2 bits (112), Expect = 1e-04
Identities = 28/76 (36%), Positives = 38/76 (50%)
Frame = +3
Query: 198 VPCFFSCSGRDVLT*A*NLTKGDAERWVSTTKKASDSAFWLEVEGNSMTAPTGSKPSFPD 377
VP S + A + DA+ W+ K F L VEG SM P G++PS+
Sbjct: 92 VPLLTSVQAGEWCEIAGTFQRDDAKVWLPCPVKHGPRTFCLTVEGESMKNP-GARPSYEP 150
Query: 378 GMLILVDPEQAVEPGD 425
G +I VDP+ A +PGD
Sbjct: 151 GDVIFVDPDVAAKPGD 166
>UniRef50_Q87ZK3 Cluster: Repressor protein c2; n=3;
Pseudomonas|Rep: Repressor protein c2 - Pseudomonas
syringae pv. tomato
Length = 243
Score = 48.8 bits (111), Expect = 1e-04
Identities = 26/59 (44%), Positives = 33/59 (55%)
Frame = +3
Query: 249 NLTKGDAERWVSTTKKASDSAFWLEVEGNSMTAPTGSKPSFPDGMLILVDPEQAVEPGD 425
N+ AE W+S S S + L+V G+SMT P G S+P G +I VDPE V GD
Sbjct: 131 NVESESAESWLSCPVPISSSGYALKVRGDSMTNP-GLGRSYPAGCIIFVDPEVEVHTGD 188
>UniRef50_Q4ZMI9 Cluster: Helix-turn-helix motif:Peptidase S24, S26A
and S26B; n=3; Pseudomonas syringae group|Rep:
Helix-turn-helix motif:Peptidase S24, S26A and S26B -
Pseudomonas syringae pv. syringae (strain B728a)
Length = 229
Score = 46.8 bits (106), Expect = 6e-04
Identities = 25/42 (59%), Positives = 28/42 (66%)
Frame = +3
Query: 294 KASDSAFWLEVEGNSMTAPTGSKPSFPDGMLILVDPEQAVEP 419
KA AFWL V G+SMTAP G S P+GMLILVD +EP
Sbjct: 133 KAKGRAFWLVVRGDSMTAPAGQ--SIPEGMLILVD--TGIEP 170
>UniRef50_Q1I888 Cluster: Putative transcriptional regulator, Cro/CI
family; n=3; Pseudomonas|Rep: Putative transcriptional
regulator, Cro/CI family - Pseudomonas entomophila
(strain L48)
Length = 229
Score = 46.8 bits (106), Expect = 6e-04
Identities = 26/54 (48%), Positives = 32/54 (59%)
Frame = +3
Query: 306 SAFWLEVEGNSMTAPTGSKPSFPDGMLILVDPEQAVEPGDFWGARYPIRPIVSR 467
+AFWL VE +SM A +G S P G+L+LVD V PG AR P +P V R
Sbjct: 138 NAFWLPVENDSMNAASGR--SLPQGVLVLVDAGIEVAPGRLVVARQPGKPAVLR 189
>UniRef50_Q88FM1 Cluster: Transcriptional regulator, Cro/CI family;
n=3; Pseudomonas putida|Rep: Transcriptional regulator,
Cro/CI family - Pseudomonas putida (strain KT2440)
Length = 234
Score = 44.8 bits (101), Expect = 0.002
Identities = 25/57 (43%), Positives = 32/57 (56%)
Frame = +3
Query: 297 ASDSAFWLEVEGNSMTAPTGSKPSFPDGMLILVDPEQAVEPGDFWGARYPIRPIVSR 467
A AFWL VE ++M+A +G S P GM +LVDP E G AR P +P + R
Sbjct: 140 AQGKAFWLTVENDAMSAVSGR--SVPQGMRMLVDPGVEAEAGRLVIARQPGKPAIFR 194
>UniRef50_Q4K9P3 Cluster: Transcriptional regulator, Cro/CI family;
n=2; Pseudomonas fluorescens|Rep: Transcriptional
regulator, Cro/CI family - Pseudomonas fluorescens
(strain Pf-5 / ATCC BAA-477)
Length = 235
Score = 44.4 bits (100), Expect = 0.003
Identities = 24/51 (47%), Positives = 31/51 (60%)
Frame = +3
Query: 270 ERWVSTTKKASDSAFWLEVEGNSMTAPTGSKPSFPDGMLILVDPEQAVEPG 422
ER+ + +A +AFWL V G++M AP+G S MLILVDP EPG
Sbjct: 131 ERYELSDYQARGAAFWLVVVGDAMIAPSGL--SISQDMLILVDPAIGAEPG 179
>UniRef50_A3UVL9 Cluster: Putative repressor protein of prophage;
n=1; Vibrio splendidus 12B01|Rep: Putative repressor
protein of prophage - Vibrio splendidus 12B01
Length = 240
Score = 43.6 bits (98), Expect = 0.005
Identities = 19/43 (44%), Positives = 28/43 (65%)
Frame = +3
Query: 273 RWVSTTKKASDSAFWLEVEGNSMTAPTGSKPSFPDGMLILVDP 401
+W + S +AF ++V GNSMT P GS PS P G +++V+P
Sbjct: 136 KWQTVAANTSSNAFAMKVSGNSMTNPHGS-PSIPAGSIVVVEP 177
>UniRef50_Q12CJ3 Cluster: Putative prophage repressor; n=1;
Polaromonas sp. JS666|Rep: Putative prophage repressor -
Polaromonas sp. (strain JS666 / ATCC BAA-500)
Length = 207
Score = 43.2 bits (97), Expect = 0.007
Identities = 21/50 (42%), Positives = 28/50 (56%)
Frame = +3
Query: 279 VSTTKKASDSAFWLEVEGNSMTAPTGSKPSFPDGMLILVDPEQAVEPGDF 428
V T F L V G+SM TG SFP+G +++V+PE EPGD+
Sbjct: 107 VPVTVPVKRQTFALRVHGDSMVGITGD--SFPEGSILVVEPELTAEPGDY 154
>UniRef50_UPI00003976F6 Cluster: COG1974: SOS-response
transcriptional repressors (RecA-mediated
autopeptidases); n=1; Haemophilus somnus 2336|Rep:
COG1974: SOS-response transcriptional repressors
(RecA-mediated autopeptidases) - Haemophilus somnus 2336
Length = 228
Score = 42.7 bits (96), Expect = 0.010
Identities = 21/50 (42%), Positives = 32/50 (64%)
Frame = +3
Query: 279 VSTTKKASDSAFWLEVEGNSMTAPTGSKPSFPDGMLILVDPEQAVEPGDF 428
+S+ KA +AF+L++ GNSM+ P F +G ++L+DPE PGDF
Sbjct: 124 ISSQVKAGQNAFYLKIVGNSMS------PRFQEGDMVLIDPEIYPVPGDF 167
>UniRef50_Q5P987 Cluster: Putative bacteriophage-related
transcriptional repressor; n=1; Azoarcus sp. EbN1|Rep:
Putative bacteriophage-related transcriptional repressor
- Azoarcus sp. (strain EbN1) (Aromatoleum aromaticum
(strain EbN1))
Length = 229
Score = 42.7 bits (96), Expect = 0.010
Identities = 23/63 (36%), Positives = 32/63 (50%)
Frame = +3
Query: 252 LTKGDAERWVSTTKKASDSAFWLEVEGNSMTAPTGSKPSFPDGMLILVDPEQAVEPGDFW 431
L G+A WV T F L V+G+SM +P F G +I+++P EPGD+
Sbjct: 124 LPVGEAYEWVETGVNVQPHTFALRVQGDSM------EPEFVAGTIIVIEPHMVAEPGDYV 177
Query: 432 GAR 440
AR
Sbjct: 178 IAR 180
>UniRef50_UPI00005F0B50 Cluster: COG1974: SOS-response
transcriptional repressors (RecA-mediated
autopeptidases); n=1; Escherichia coli E110019|Rep:
COG1974: SOS-response transcriptional repressors
(RecA-mediated autopeptidases) - Escherichia coli
E110019
Length = 224
Score = 40.3 bits (90), Expect = 0.051
Identities = 17/44 (38%), Positives = 27/44 (61%)
Frame = +3
Query: 270 ERWVSTTKKASDSAFWLEVEGNSMTAPTGSKPSFPDGMLILVDP 401
+ WV K ++++F L VEG++MT G P+ PDG +L+ P
Sbjct: 115 KNWVDVMTKTAENSFLLHVEGDAMTNSNG-LPTIPDGSTVLITP 157
>UniRef50_A3LLR8 Cluster: Putative uncharacterized protein; n=2;
Pseudomonas aeruginosa 2192|Rep: Putative
uncharacterized protein - Pseudomonas aeruginosa 2192
Length = 221
Score = 40.3 bits (90), Expect = 0.051
Identities = 20/56 (35%), Positives = 28/56 (50%)
Frame = +3
Query: 261 GDAERWVSTTKKASDSAFWLEVEGNSMTAPTGSKPSFPDGMLILVDPEQAVEPGDF 428
GDAE W+ +AF L++EG SM P F DG +++DP PG +
Sbjct: 116 GDAEEWIEAPGPVGPNAFILKIEGLSML------PKFSDGEKVVIDPSLEALPGHY 165
>UniRef50_Q6J1N3 Cluster: Putative prophage repressor protein; n=1;
Burkholderia phage BcepC6B|Rep: Putative prophage
repressor protein - Burkholderia phage BcepC6B
Length = 244
Score = 38.7 bits (86), Expect = 0.16
Identities = 20/56 (35%), Positives = 30/56 (53%)
Frame = +3
Query: 249 NLTKGDAERWVSTTKKASDSAFWLEVEGNSMTAPTGSKPSFPDGMLILVDPEQAVE 416
N GDAE W++ + F L V G+SM P+G SF +G I V+P++ +
Sbjct: 129 NFQPGDAEDWIACPFPSGSHGFVLRVVGDSMYNPSGDM-SFREGDFISVNPDREAQ 183
>UniRef50_A7MN76 Cluster: Putative uncharacterized protein; n=1;
Enterobacter sakazakii ATCC BAA-894|Rep: Putative
uncharacterized protein - Enterobacter sakazakii ATCC
BAA-894
Length = 1043
Score = 37.9 bits (84), Expect = 0.27
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = +1
Query: 508 ENPGVTQLNRLAAHPPFASWRNSEEGPHRFALPQQXRSLNGEW 636
+NP +T +NRL +H P WR+++ R SL+GEW
Sbjct: 28 QNPAITSVNRLPSHTPLHGWRDADRA-RRGEPSDAVLSLDGEW 69
>UniRef50_Q8X5F7 Cluster: Putative repressor protein encoded within
prophage CP-933O; n=4; Escherichia coli|Rep: Putative
repressor protein encoded within prophage CP-933O -
Escherichia coli O157:H7
Length = 212
Score = 37.5 bits (83), Expect = 0.36
Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Frame = +3
Query: 306 SAFWLEVEGNSMTAPTGSKPSFPDGMLILVDPEQAVEPGDFWGA--RYPIRPIVSRITIH 479
+ F + +E +SM+ +G S P+G + VDP++ V+PG+ A + P++ ++ I
Sbjct: 119 NTFAVVLESDSMST-SGGGVSIPNGSTVFVDPDRIVQPGNIVLALPKGTTTPVIRKLEIE 177
Query: 480 WPSFYNVVTGKPWRYPT 530
P V T RYP+
Sbjct: 178 GPDILLVPTNP--RYPS 192
>UniRef50_A0HIU5 Cluster: Putative prophage repressor; n=1;
Comamonas testosteroni KF-1|Rep: Putative prophage
repressor - Comamonas testosteroni KF-1
Length = 229
Score = 37.5 bits (83), Expect = 0.36
Identities = 20/48 (41%), Positives = 28/48 (58%)
Frame = +3
Query: 297 ASDSAFWLEVEGNSMTAPTGSKPSFPDGMLILVDPEQAVEPGDFWGAR 440
AS+ AF+LE++G+SM P F G + +DPE PGDF A+
Sbjct: 129 ASEWAFFLEIDGDSML------PEFNPGDRVRIDPEVTPRPGDFVAAK 170
>UniRef50_Q2SPC6 Cluster: SOS-response transcriptional repressors;
n=1; Hahella chejuensis KCTC 2396|Rep: SOS-response
transcriptional repressors - Hahella chejuensis (strain
KCTC 2396)
Length = 195
Score = 36.7 bits (81), Expect = 0.63
Identities = 17/47 (36%), Positives = 27/47 (57%)
Frame = +3
Query: 264 DAERWVSTTKKASDSAFWLEVEGNSMTAPTGSKPSFPDGMLILVDPE 404
DA W + AF ++ G+SM P G+ PS P+G +++VDP+
Sbjct: 85 DAIAWRGISVVVGPHAFAMKAVGDSMANPHGT-PSIPEGAIVVVDPD 130
>UniRef50_A2I308 Cluster: Putative repressor protein; n=1; Vibrio
phage VP882|Rep: Putative repressor protein - Vibrio
phage VP882
Length = 243
Score = 36.7 bits (81), Expect = 0.63
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +3
Query: 270 ERWVSTTK-KASDSAFWLEVEGNSMTAPTGSKPSFPDGMLILVDPEQAVEPGDF 428
++WV + K + LEV G+SM A G SFP+G I+VDP + E F
Sbjct: 134 DKWVVAPRAKLPPRCYALEVRGDSMQAQYGM--SFPEGCYIIVDPNRVPENKSF 185
>UniRef50_Q7WLR7 Cluster: Putative phage repressor; n=2;
Proteobacteria|Rep: Putative phage repressor -
Bordetella bronchiseptica (Alcaligenes bronchisepticus)
Length = 227
Score = 36.3 bits (80), Expect = 0.83
Identities = 24/60 (40%), Positives = 30/60 (50%)
Frame = +3
Query: 261 GDAERWVSTTKKASDSAFWLEVEGNSMTAPTGSKPSFPDGMLILVDPEQAVEPGDFWGAR 440
G+A ++ T S AF LE+ G SM P F G I+VD E +PGDF AR
Sbjct: 115 GEAVEYLLTDMNLSQHAFALEITGLSMY------PDFKPGDRIIVDQEICPQPGDFVVAR 168
>UniRef50_A7JPM0 Cluster: Possible LexA family repressor/S24 family
protease; n=1; Mannheimia haemolytica PHL213|Rep:
Possible LexA family repressor/S24 family protease -
Mannheimia haemolytica PHL213
Length = 218
Score = 35.9 bits (79), Expect = 1.1
Identities = 21/61 (34%), Positives = 35/61 (57%)
Frame = +3
Query: 255 TKGDAERWVSTTKKASDSAFWLEVEGNSMTAPTGSKPSFPDGMLILVDPEQAVEPGDFWG 434
T GD E ++ T + S+ AF LE++G+SM +P F +G +++DP+ G+F
Sbjct: 104 TCGDYE-YILTDLEVSEDAFALEIKGDSM------EPDFIEGDRVIIDPDVQPHAGEFVA 156
Query: 435 A 437
A
Sbjct: 157 A 157
>UniRef50_P06219 Cluster: Beta-galactosidase; n=11;
Gammaproteobacteria|Rep: Beta-galactosidase - Klebsiella
pneumoniae
Length = 1034
Score = 35.9 bits (79), Expect = 1.1
Identities = 21/41 (51%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +1
Query: 511 NPGVTQLNRLAAHPPFASWRNSEEGPHRFALP-QQXRSLNG 630
N +T LNRL AHP FASWR +E R LP + R L+G
Sbjct: 25 NQTITHLNRLPAHPVFASWR--DELAARDNLPSSRRRQLDG 63
>UniRef50_Q7Y2L0 Cluster: Putative uncharacterized protein; n=2;
unclassified Lambda-like viruses|Rep: Putative
uncharacterized protein - Stx2 converting phage II
Length = 81
Score = 35.5 bits (78), Expect = 1.5
Identities = 22/51 (43%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
Frame = +2
Query: 110 LKNLALQSPEKSTRCMKRLVCSRH---LEVSMSTLFFLMFRQGCSHLSLEP 253
L L L + +T L+ + H L+ +MSTLFFLMFR GCS + EP
Sbjct: 22 LNTLVLITYHSTTTGHFHLLANTHRPQLKNNMSTLFFLMFRLGCSLQNSEP 72
>UniRef50_Q6ALL6 Cluster: Related to repressor protein; n=1;
Desulfotalea psychrophila|Rep: Related to repressor
protein - Desulfotalea psychrophila
Length = 236
Score = 35.1 bits (77), Expect = 1.9
Identities = 22/60 (36%), Positives = 29/60 (48%)
Frame = +3
Query: 249 NLTKGDAERWVSTTKKASDSAFWLEVEGNSMTAPTGSKPSFPDGMLILVDPEQAVEPGDF 428
N W++ KA +AF L+V SM +P F G +I+VDPE A E G F
Sbjct: 122 NTLSATINEWITVICKAGKTAFALKVMCQSM------EPEFCPGDIIIVDPEIAPETGRF 175
>UniRef50_A4SLB7 Cluster: Phage repressor; n=1; Aeromonas
salmonicida subsp. salmonicida A449|Rep: Phage repressor
- Aeromonas salmonicida (strain A449)
Length = 227
Score = 34.7 bits (76), Expect = 2.5
Identities = 21/60 (35%), Positives = 33/60 (55%)
Frame = +3
Query: 261 GDAERWVSTTKKASDSAFWLEVEGNSMTAPTGSKPSFPDGMLILVDPEQAVEPGDFWGAR 440
G+ E +V+ + F L + G+SM P F +G LI+VDP++ +PGD+ AR
Sbjct: 113 GNVE-YVTASVDIGPCGFGLWMRGDSML------PQFKEGDLIIVDPDEVPQPGDYVVAR 165
>UniRef50_Q90XY7 Cluster: Putative uncharacterized protein; n=2;
Takifugu rubripes|Rep: Putative uncharacterized protein
- Fugu rubripes (Japanese pufferfish) (Takifugu
rubripes)
Length = 599
Score = 34.3 bits (75), Expect = 3.4
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = -1
Query: 330 LQPQARMQNHWLFWLCLPISPHHLW 256
L+P+ +Q H L CL +SPHHLW
Sbjct: 416 LKPEEEVQGHPLGPACLTLSPHHLW 440
>UniRef50_Q4S2U6 Cluster: Chromosome 17 SCAF14760, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 17 SCAF14760, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 1413
Score = 34.3 bits (75), Expect = 3.4
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = -1
Query: 330 LQPQARMQNHWLFWLCLPISPHHLW 256
L+P+ M+ H L CL +SPHHLW
Sbjct: 32 LKPEQEMRGHPLGPACLALSPHHLW 56
>UniRef50_Q01XR3 Cluster: Major facilitator superfamily MFS_1; n=1;
Solibacter usitatus Ellin6076|Rep: Major facilitator
superfamily MFS_1 - Solibacter usitatus (strain
Ellin6076)
Length = 403
Score = 34.3 bits (75), Expect = 3.4
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +3
Query: 426 FWGARYPIRPIVSRITIHWPSFYNVVTGKPWRYPT 530
+WG R R I++RI W S + + TG W YP+
Sbjct: 52 WWGERVGARRILTRIVAWW-SCFTIATGLSWNYPS 85
>UniRef50_P81650 Cluster: Beta-galactosidase; n=26;
Gammaproteobacteria|Rep: Beta-galactosidase -
Pseudoalteromonas haloplanktis (Alteromonas
haloplanktis)
Length = 1039
Score = 34.3 bits (75), Expect = 3.4
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = +1
Query: 508 ENPGVTQLNRLAAHPPFASWRNSEEGPHRFALPQQXRSLNGEW 636
ENP Q+N++ AH P ++ E+ R Q +SLNG+W
Sbjct: 14 ENPITVQVNQVKAHSPLNGFKTIEDA--RENTQSQKKSLNGQW 54
>UniRef50_A7JW81 Cluster: Possible LexA family repressor/S24 family
protease; n=10; Pasteurellaceae|Rep: Possible LexA
family repressor/S24 family protease - Mannheimia
haemolytica PHL213
Length = 219
Score = 33.9 bits (74), Expect = 4.4
Identities = 18/54 (33%), Positives = 28/54 (51%)
Frame = +3
Query: 276 WVSTTKKASDSAFWLEVEGNSMTAPTGSKPSFPDGMLILVDPEQAVEPGDFWGA 437
++ T A AF+L + G SM +P F +G L+L+D + PGD+ A
Sbjct: 114 YIDTEIDAGPDAFFLRISGMSM------EPKFSEGDLVLIDIRKRPHPGDYVAA 161
>UniRef50_A3L6T1 Cluster: Lactoylglutathione lyase and related
lyases; n=3; Proteobacteria|Rep: Lactoylglutathione
lyase and related lyases - Pseudomonas aeruginosa 2192
Length = 323
Score = 33.5 bits (73), Expect = 5.9
Identities = 15/51 (29%), Positives = 24/51 (47%)
Frame = -2
Query: 584 PSSLLRQLAKGGCAARRLSWVTPGFSSHDVVKRRPVNCNTTHYRANWVPGP 432
PS + L + G R+ + ++ DV++ N + HY NW PGP
Sbjct: 215 PSGPVEHLREEGYRRARMGFTVANSATLDVIEATSWNTDAGHYLNNWGPGP 265
>UniRef50_Q48JQ8 Cluster: Prophage PSPPH03, transcriptional
regulator, Cro/CI family; n=1; Pseudomonas syringae pv.
phaseolicola 1448A|Rep: Prophage PSPPH03,
transcriptional regulator, Cro/CI family - Pseudomonas
syringae pv. phaseolicola (strain 1448A / Race 6)
Length = 286
Score = 33.1 bits (72), Expect = 7.8
Identities = 19/62 (30%), Positives = 28/62 (45%)
Frame = +1
Query: 4 DKMGMGQSGVGALFNGIXXXXXXXXXXXTKILKVSVEEFSPSIAREIYEMYEAVSMQPSL 183
D+ GM + V F GI +++L+ VE FSP +A+EI + A S
Sbjct: 38 DEAGMTPAAVNLYFKGINPLNTRFAAVLSRMLQEPVERFSPRLAKEIAALTNAAKPAASQ 97
Query: 184 RS 189
S
Sbjct: 98 SS 99
>UniRef50_Q15XN9 Cluster: Glycoside hydrolase family 2, TIM barrel
precursor; n=1; Pseudoalteromonas atlantica T6c|Rep:
Glycoside hydrolase family 2, TIM barrel precursor -
Pseudoalteromonas atlantica (strain T6c / BAA-1087)
Length = 1079
Score = 33.1 bits (72), Expect = 7.8
Identities = 17/43 (39%), Positives = 22/43 (51%)
Frame = +1
Query: 508 ENPGVTQLNRLAAHPPFASWRNSEEGPHRFALPQQXRSLNGEW 636
ENP V Q+NRL A S+ E+ R +SLNG+W
Sbjct: 35 ENPDVIQINRLPARATSYSFDTPEQALTRDRNQSTIQSLNGQW 77
>UniRef50_A6GJ84 Cluster: Putative uncharacterized protein; n=1;
Plesiocystis pacifica SIR-1|Rep: Putative
uncharacterized protein - Plesiocystis pacifica SIR-1
Length = 698
Score = 33.1 bits (72), Expect = 7.8
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -2
Query: 650 RLQFAHSPFKLRNCWGRANRCGPSSLLRQLAKG 552
R+ F+ S LRN W A+ CGP + + Q+ +G
Sbjct: 586 RVSFSVSANHLRNYWASASGCGPQATISQITQG 618
>UniRef50_A3FKJ8 Cluster: Cation-transporting ATPase; n=1;
Toxoplasma gondii|Rep: Cation-transporting ATPase -
Toxoplasma gondii
Length = 1200
Score = 33.1 bits (72), Expect = 7.8
Identities = 23/79 (29%), Positives = 33/79 (41%)
Frame = -3
Query: 436 APQKSPGSTACSGSTRINIPSGKLGLEPVGAVMELPSTSSQNAESLAFLVVLTHLSASPL 257
+P SP S++ S ST + S A LPS + + L V +A +
Sbjct: 602 SPSSSPSSSSASSSTSSSASSSASSSASSSASSSLPSAAGVPSSRRRTLRVFVKGAAETV 661
Query: 256 VRF*AQVRTSLPEHEKKQG 200
++ AQV LPE E G
Sbjct: 662 LKLCAQVVVPLPEGEDAAG 680
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 772,209,278
Number of Sequences: 1657284
Number of extensions: 16329913
Number of successful extensions: 42466
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 40645
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42420
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 63792713725
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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