Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0070
         (765 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        23   3.5  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    23   3.5  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   4.7  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      22   4.7  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   6.2  

>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 14/61 (22%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
 Frame = +2

Query: 74  TPHCLQKFSKLALKNLALQSPEKSTRCMKRLVCSRHLEVSMSTLFFLMFRQG--CSHLSL 247
           TP    +  +   +N ++ S E   R +K  +C R    S+S +  L+  +G  C  +++
Sbjct: 114 TPEVENRIEQYKRENPSIFSWEIRDRLVKEGICDRSTAPSVSAISRLLRGKGGECDEITI 173

Query: 248 E 250
           +
Sbjct: 174 Q 174


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = -3

Query: 343 VMELPSTSSQNAESLAFLVVLTHL 272
           +ME+ +   +N + +  +VVLTHL
Sbjct: 436 LMEMWNIPRENIDPIPLVVVLTHL 459


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +1

Query: 562 SWRNSEEGPHRFA 600
           +WR +  GPHR A
Sbjct: 597 TWRRNFHGPHRLA 609


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +1

Query: 562 SWRNSEEGPHRFA 600
           +WR +  GPHR A
Sbjct: 489 TWRRNFHGPHRLA 501


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 9/40 (22%), Positives = 18/40 (45%)
 Frame = -3

Query: 421  PGSTACSGSTRINIPSGKLGLEPVGAVMELPSTSSQNAES 302
            P    C G++ +N+       +P  +   + +T+S N  S
Sbjct: 1323 PEKATCDGTSNVNVVDIVTTAKPAQSTTSVSTTTSWNPGS 1362


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,687
Number of Sequences: 336
Number of extensions: 4110
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20546262
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)