Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0070
         (765 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0877 + 21230447-21230815,21231855-21232208,21232417-212325...    32   0.58 
03_06_0559 + 34719296-34719410,34719519-34719577,34719664-347213...    29   4.1  
06_01_0440 + 3127197-3127700,3128299-3128670                           28   7.1  
04_04_0624 + 26676765-26676879,26676955-26677093,26678012-266780...    28   7.1  
04_04_1073 - 30606472-30606515,30606897-30606988,30607152-306072...    28   9.4  

>10_08_0877 +
           21230447-21230815,21231855-21232208,21232417-21232504,
           21232844-21233268,21233477-21233632,21233849-21234016,
           21234170-21234310,21234393-21234629,21234710-21234823,
           21235096-21235272
          Length = 742

 Score = 31.9 bits (69), Expect = 0.58
 Identities = 14/57 (24%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
 Frame = -3

Query: 451 RIGYRAPQKSPGSTACSGSTRINIPSGKLGLEPVGAV-MELPSTSSQNAESLAFLVV 284
           R+    P ++  + A +G   I +P G +G +P+G V +++ S S   ++   F ++
Sbjct: 84  RVAAEPPPEAAAAAAANGVRLIGVPRGGVGDQPIGFVPLKISSFSESKSDDKRFYII 140


>03_06_0559 +
           34719296-34719410,34719519-34719577,34719664-34721322,
           34722421-34722562,34722645-34723330
          Length = 886

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
 Frame = -3

Query: 454 GRIGYRAPQKSP--GSTACSGSTRINIPSGKLGLEPVGAVMELPSTSSQNAES 302
           G   YR P   P  GS   SG+T  ++ S   G  PVG  ++  S SS ++ +
Sbjct: 250 GLTSYRLPTGKPLDGSLKSSGNTSASVVSQSNGGAPVGPKVKASSRSSPDSRA 302


>06_01_0440 + 3127197-3127700,3128299-3128670
          Length = 291

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = +2

Query: 521 LPNLIALQHIPLSPAGVIAKRARTDSPFPN 610
           LP+L+ + HI  +   V A+RA TD  FP+
Sbjct: 164 LPHLVGIGHIARAIRFVRAERASTDGTFPH 193


>04_04_0624 +
           26676765-26676879,26676955-26677093,26678012-26678083,
           26678174-26678317,26678402-26678530,26678819-26678938,
           26679015-26679076,26679937-26680170,26680259-26680485,
           26680551-26680683,26680787-26680944,26681139-26681351,
           26681482-26681730
          Length = 664

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 18/40 (45%), Positives = 21/40 (52%)
 Frame = -1

Query: 168 TNRFIHLVDFSGD*RAKFFNANFENFCKQCGVISI*CIDA 49
           T  FI LVD       K  NAN EN    C V+++ CIDA
Sbjct: 590 TEEFIKLVD------PKLMNANHENLGIVCNVVNL-CIDA 622


>04_04_1073 -
           30606472-30606515,30606897-30606988,30607152-30607243,
           30607362-30607469,30607614-30607748,30607826-30607871,
           30608320-30608420,30608512-30608649,30608721-30608819,
           30608920-30609036,30609941-30610102,30610271-30610330,
           30611120-30611216,30611238-30611296,30611364-30611480,
           30611922-30612020,30612115-30612180,30612405-30612542,
           30612659-30612742,30612820-30612892,30612937-30612992,
           30613074-30613182,30613253-30613335,30613406-30613489,
           30613679-30613750,30613827-30613904,30613984-30614067,
           30614142-30614212,30614497-30614566,30614866-30614955,
           30615046-30615177,30615250-30615350,30615634-30615691,
           30615762-30615878,30617981-30618133
          Length = 1094

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = -1

Query: 447 LGTGPPRNHLAQQPAQGQRE 388
           L T PP +HL Q+P  G+RE
Sbjct: 905 LATEPPTDHLMQRPPVGRRE 924


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,964,914
Number of Sequences: 37544
Number of extensions: 457647
Number of successful extensions: 1154
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1129
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1154
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2051430072
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)