Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0070
         (765 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr...    31   0.68 
Z75525-2|CAA99763.1| 1390|Caenorhabditis elegans Hypothetical pr...    28   6.3  
Z73103-3|CAA97423.1|  540|Caenorhabditis elegans Hypothetical pr...    28   6.3  
Z81089-5|CAD89731.2|  933|Caenorhabditis elegans Hypothetical pr...    28   8.4  
Z73104-8|CAA97436.2|  108|Caenorhabditis elegans Hypothetical pr...    28   8.4  

>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
            K06A9.1b protein.
          Length = 2232

 Score = 31.5 bits (68), Expect = 0.68
 Identities = 20/55 (36%), Positives = 25/55 (45%)
 Frame = -3

Query: 424  SPGSTACSGSTRINIPSGKLGLEPVGAVMELPSTSSQNAESLAFLVVLTHLSASP 260
            S GSTA  GST  +  SG     P  +    PSTS   +   +    LT +S SP
Sbjct: 1071 SSGSTATMGSTEASSTSGGSSTSPNPSQSTSPSTSGATSSPGSSGTTLTSISPSP 1125


>Z75525-2|CAA99763.1| 1390|Caenorhabditis elegans Hypothetical
           protein C03D6.4 protein.
          Length = 1390

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
 Frame = +3

Query: 279 VSTTKKASDSAFWLEVEGNSMTAPTGS--KPSFPDGMLI 389
           +ST  K  D   W+ VEG S+  PT S  K + P G+ +
Sbjct: 329 ISTVGKRDDWQTWVPVEGESIYLPTTSSGKDTVPIGVAV 367


>Z73103-3|CAA97423.1|  540|Caenorhabditis elegans Hypothetical
           protein C08F8.4 protein.
          Length = 540

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = -3

Query: 643 NLPIRHSSCXTVGEGRIGAGPLRYYASW 560
           NL +R SS  T   G +  GP+ +Y++W
Sbjct: 196 NLWLRSSSATTDHSGTVIVGPMNHYSTW 223


>Z81089-5|CAD89731.2|  933|Caenorhabditis elegans Hypothetical
           protein F53H4.6 protein.
          Length = 933

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = +3

Query: 255 TKGDAERWVSTTKKASDSAFWLEVEG 332
           T GD E+W S  K     AFW+   G
Sbjct: 31  TNGDQEKWDSALKYRQAKAFWMRHTG 56


>Z73104-8|CAA97436.2|  108|Caenorhabditis elegans Hypothetical
           protein K08D8.1 protein.
          Length = 108

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +1

Query: 136 REIYEMYEAVSMQPSLRSEYEYPVFSHVQA 225
           R +Y+ Y  V M+P   + Y+YP  SH +A
Sbjct: 13  RWLYKRYHIV-MEPQAPNTYQYPTTSHFEA 41


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,244,079
Number of Sequences: 27780
Number of extensions: 369785
Number of successful extensions: 837
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 818
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 837
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1830096852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)