Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0070
         (765 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.    25   0.77 
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    25   0.77 
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    25   0.77 
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    23   2.4  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    22   5.4  
AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter...    21   9.5  
AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter...    21   9.5  

>X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.
          Length = 162

 Score = 25.0 bits (52), Expect = 0.77
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -2

Query: 401 RVNEN*HSVRKAWLGACWCGHG 336
           R+ +N    R  + G  WCGHG
Sbjct: 19  RIGDNELEERIIYPGTLWCGHG 40


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 25.0 bits (52), Expect = 0.77
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -2

Query: 401 RVNEN*HSVRKAWLGACWCGHG 336
           R+ +N    R  + G  WCGHG
Sbjct: 24  RIGDNELEERIIYPGTLWCGHG 45


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 25.0 bits (52), Expect = 0.77
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -2

Query: 401 RVNEN*HSVRKAWLGACWCGHG 336
           R+ +N    R  + G  WCGHG
Sbjct: 24  RIGDNELEERIIYPGTLWCGHG 45


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
            protein.
          Length = 1143

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 13/34 (38%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
 Frame = +3

Query: 342  TAPTGSKPSFPDGMLILVDPEQAVEP-GDFWGAR 440
            +AP    PS P   +ILV P   + P   FW  R
Sbjct: 954  SAPNFYMPSEPKAPMILVGPGTGIAPFRGFWHHR 987


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = -2

Query: 509 SSHDVVKRRPVNCNTTHYRANWVPGP 432
           +S +  K++P +C+T  YR   V  P
Sbjct: 559 ASDECNKKQPSDCDTLEYRNGEVTTP 584


>AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 593

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = +1

Query: 121 SPSIAREIYEMYEAVSMQPSLRSEYEYPVFSHV 219
           +P+I   ++  +  +   P     YEYP +SHV
Sbjct: 499 TPAICVGVFT-FNIIKFVPVKYLTYEYPWWSHV 530


>AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 646

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = +1

Query: 121 SPSIAREIYEMYEAVSMQPSLRSEYEYPVFSHV 219
           +P+I   ++  +  +   P     YEYP +SHV
Sbjct: 552 TPAICVGVFT-FNIIKFVPVKYLTYEYPWWSHV 583


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 206,486
Number of Sequences: 438
Number of extensions: 4724
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 23911269
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)