Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0069
         (730 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g20320.2 68416.m02575 mce-related family protein contains Pfa...    29   3.2  
At3g20320.1 68416.m02574 mce-related family protein contains Pfa...    29   3.2  
At1g11730.1 68414.m01346 galactosyltransferase family protein co...    28   7.3  
At2g31750.1 68415.m03877 UDP-glucoronosyl/UDP-glucosyl transfera...    27   9.6  

>At3g20320.2 68416.m02575 mce-related family protein contains Pfam
           PF02470: mce related protein
          Length = 282

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = -1

Query: 727 DCVFQIWPRNPLPTKNLGPIH 665
           + +  I PRNP+P  ++GP+H
Sbjct: 196 ETMIDIMPRNPIPEPSVGPLH 216


>At3g20320.1 68416.m02574 mce-related family protein contains Pfam
           PF02470: mce related protein
          Length = 381

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = -1

Query: 727 DCVFQIWPRNPLPTKNLGPIH 665
           + +  I PRNP+P  ++GP+H
Sbjct: 196 ETMIDIMPRNPIPEPSVGPLH 216


>At1g11730.1 68414.m01346 galactosyltransferase family protein
           contains Pfam profile: PF01762 galactosyltransferase
          Length = 384

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +3

Query: 426 HGNVYVKKRITIKTLFGLALSLGNITFYLKV 518
           H   Y+K     KT F  A+SL +  FY+KV
Sbjct: 189 HTEGYMKLSAKTKTFFATAVSLWDAEFYIKV 219


>At2g31750.1 68415.m03877 UDP-glucoronosyl/UDP-glucosyl transferase
           family protein contains Pfam profile: PF00201
           UDP-glucoronosyl and UDP-glucosyl transferase
          Length = 456

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = -1

Query: 709 WPRNPLPTKNLGPIHSIPFNILDKPL 632
           W +N  P KN+GP+  IP   LDK L
Sbjct: 219 WMKNQWPVKNIGPM--IPSMYLDKRL 242


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,318,392
Number of Sequences: 28952
Number of extensions: 209921
Number of successful extensions: 399
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 394
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 399
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1594686376
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)