Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0068
         (518 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    22   2.8  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   5.0  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    21   5.0  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   5.0  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    21   5.0  
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    21   8.7  

>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = +1

Query: 13  LGCLMVSFIFLTAILIV 63
           LG +++ FIF  AILI+
Sbjct: 239 LGSILIFFIFPLAILII 255


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = +3

Query: 315 PLSATASFPCELFITI 362
           P    A +PC LF+ I
Sbjct: 588 PKGTEAGYPCHLFVMI 603


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = +3

Query: 129 WPMSLLTGRPLLKV 170
           WP+  +TGR ++K+
Sbjct: 238 WPLVFITGRFVIKI 251


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +3

Query: 348 LFITIFIFRASVDHGHKY 401
           + ITIF F A+V  G  Y
Sbjct: 538 IVITIFFFTANVQAGELY 555


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +3

Query: 348 LFITIFIFRASVDHGHKY 401
           + ITIF F A+V  G  Y
Sbjct: 263 IVITIFFFTANVQAGELY 280


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -3

Query: 297 HRGSKGCRKDDAVAWPY 247
           +R  K  R+  A+AWPY
Sbjct: 121 NRRMKDKRQRMAIAWPY 137


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,795
Number of Sequences: 336
Number of extensions: 2904
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12468463
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)