Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0068
         (518 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_02_0139 + 7041030-7041188,7041451-7042215,7044133-7044519           30   1.3  
03_02_0711 - 10591738-10591772,10592260-10592447,10593730-105938...    30   1.3  
01_06_0595 - 30485460-30486097,30486721-30487179,30487339-304875...    29   1.7  
11_01_0658 + 5342508-5343602,5343697-5343764,5343994-5344042,534...    29   3.0  
06_03_0773 - 24493772-24494252,24494377-24495758                       27   9.0  
01_05_0426 + 22042215-22042595,22044846-22045688                       27   9.0  

>05_02_0139 + 7041030-7041188,7041451-7042215,7044133-7044519
          Length = 436

 Score = 29.9 bits (64), Expect = 1.3
 Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
 Frame = +2

Query: 182 YPYPIFLP*TNFRAPVDHGQNK*GQATASSFLHP--LEPLWTTAYET 316
           Y + + L  + F    +  +N+ GQ+T+   LH   L+P+WT+ YET
Sbjct: 76  YNFTVSLVWSPFLTKSEVFENENGQSTSEIQLHLDILDPIWTSQYET 122


>03_02_0711 -
           10591738-10591772,10592260-10592447,10593730-10593872,
           10593973-10594098,10594187-10594294,10594401-10594618,
           10594719-10595208
          Length = 435

 Score = 29.9 bits (64), Expect = 1.3
 Identities = 20/54 (37%), Positives = 25/54 (46%)
 Frame = -1

Query: 395 MTVVHRGSENKYRNEELTWE*RCGAERSRTPWSTGALKDVGRTMLWPGLICFDR 234
           +TV HR  EN    E +T     G E SR     G  ++VG    WPG +C  R
Sbjct: 203 LTVDHRLEENVEERERVT---ASGGEVSRLNLCGG--QEVGPLRCWPGGLCLSR 251


>01_06_0595 -
           30485460-30486097,30486721-30487179,30487339-30487558,
           30488229-30489980
          Length = 1022

 Score = 29.5 bits (63), Expect = 1.7
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = +1

Query: 244 QIRPGHSIVLPTSFRAPVDHGVRDRSAPQRHSHVSSSLRY 363
           Q+ P    VLP+S    ++HGV   S P R   + S+L +
Sbjct: 696 QLAPDKQYVLPSSSSTSLNHGVLAGSFPDRDMAIHSALEH 735


>11_01_0658 +
           5342508-5343602,5343697-5343764,5343994-5344042,
           5344217-5344333,5344438-5344506,5344631-5344725,
           5345580-5345658,5346499-5346563,5347368-5347461,
           5347675-5347744,5348363-5349357
          Length = 931

 Score = 28.7 bits (61), Expect = 3.0
 Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
 Frame = +2

Query: 143 VDGSTIIKSKP-VHYPYPIFLP*TNFRAPVDHGQNK*GQATASSFLHPLEPLWTTAYE 313
           V+ +T ++S P   +P P+     N   P     N+    TASS L P++P  T   E
Sbjct: 711 VNSTTSLQSTPSTSFPSPVPTTSNNNMMPAPQNTNQLSSPTASSNLPPMQPPATRPQE 768


>06_03_0773 - 24493772-24494252,24494377-24495758
          Length = 620

 Score = 27.1 bits (57), Expect = 9.0
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = +1

Query: 274 PTSFRAPVDHGVRDRSAPQRHSHVSSSLRYLFSEPLW 384
           P S+    D G  D + P  +S V + LRY+   PL+
Sbjct: 326 PNSYCVSGDDGRLDCACPTGYSSVDTKLRYMGCRPLF 362


>01_05_0426 + 22042215-22042595,22044846-22045688
          Length = 407

 Score = 27.1 bits (57), Expect = 9.0
 Identities = 15/45 (33%), Positives = 21/45 (46%)
 Frame = +1

Query: 295 VDHGVRDRSAPQRHSHVSSSLRYLFSEPLWTTVINIRPRPQHRPS 429
           +DHGVR   A  RH         + +E   T  +  +P  QHRP+
Sbjct: 12  IDHGVRQVWADTRHGIAGGEHERVHAE---TFALAPQPHKQHRPA 53


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,933,496
Number of Sequences: 37544
Number of extensions: 328132
Number of successful extensions: 760
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 717
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 759
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1130733700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)