Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0068
         (518 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    28   0.16 
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    25   2.0  
AF532982-1|AAQ10289.1|  459|Anopheles gambiae putative RNA methy...    25   2.0  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    23   6.2  

>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 28.3 bits (60), Expect = 0.16
 Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 4/52 (7%)
 Frame = +1

Query: 373 EPLWTTVINIRPRPQHR-PS*SFRAPVDHGVR---DRSAPQHQNPHKPKQRQ 516
           + LWTTV+  RP  +HR P    +     G R    +   Q Q   +P+Q+Q
Sbjct: 232 QQLWTTVVRGRPSQRHRQPQQQQQQQQQQGERYVPPQLRQQRQQQQRPRQQQ 283


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
            protein.
          Length = 1645

 Score = 24.6 bits (51), Expect = 2.0
 Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
 Frame = +3

Query: 138  SLLTGRPLLKVSLYITPIL--FSFLEPISEPLWTTVKTNKARPQHRP 272
            +LL  RPL+    Y TP +     +EP  + L  T+  N A+P  +P
Sbjct: 1086 TLLLKRPLVSAR-YGTPRIGPAPAVEPAKKTLVATILPNSAKPAQQP 1131


>AF532982-1|AAQ10289.1|  459|Anopheles gambiae putative RNA
           methylase protein.
          Length = 459

 Score = 24.6 bits (51), Expect = 2.0
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +2

Query: 116 KIQPLAYVFVDGSTIIKSKPVHYPY 190
           KI+ + Y+ V+G   +K+  VHY Y
Sbjct: 129 KIETMQYLPVEGPVNLKTPDVHYWY 153


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 23.0 bits (47), Expect = 6.2
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +2

Query: 89  ESQYQHQQYKIQP 127
           + Q Q QQYK+QP
Sbjct: 483 QQQQQQQQYKLQP 495


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 580,449
Number of Sequences: 2352
Number of extensions: 12000
Number of successful extensions: 14
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47360208
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)