Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0068
         (518 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK092303-1|BAC03856.1|  316|Homo sapiens protein ( Homo sapiens ...    32   1.0  
AK131382-1|BAD18533.1|  165|Homo sapiens protein ( Homo sapiens ...    30   4.2  

>AK092303-1|BAC03856.1|  316|Homo sapiens protein ( Homo sapiens
           cDNA FLJ34984 fis, clone OCBBF2001639. ).
          Length = 316

 Score = 32.3 bits (70), Expect = 1.0
 Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
 Frame = +3

Query: 207 EPISEPLWTTVKTNKARPQHRPSYI---L*SPCGPRRTRPLSATASFP 341
           EP+ EP + +++   +RP+ RP      L S  GPR  RP     +FP
Sbjct: 79  EPVCEPEFRSMRMEVSRPEPRPDGTGPGLGSQAGPRTPRPAPPPLAFP 126


>AK131382-1|BAD18533.1|  165|Homo sapiens protein ( Homo sapiens
           cDNA FLJ16455 fis, clone BRAWH3007441, moderately
           similar to Homo sapiens CAT56 protein (CAT56). ).
          Length = 165

 Score = 30.3 bits (65), Expect = 4.2
 Identities = 19/49 (38%), Positives = 26/49 (53%)
 Frame = +1

Query: 181 LPLSYFPSLNQFQSPCGPRSKQIRPGHSIVLPTSFRAPVDHGVRDRSAP 327
           L LS FP+L++   P G R   I P  S+  P   R P+  G+  RS+P
Sbjct: 27  LSLSLFPALHR--GPPGSRGPLIPPLLSLPPPPWGRGPIRRGLGPRSSP 73


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,777,417
Number of Sequences: 237096
Number of extensions: 1822041
Number of successful extensions: 3284
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3115
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3284
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4933413474
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)