Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0067
         (645 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    31   0.041
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            26   0.89 
U89799-1|AAD03792.1|  332|Anopheles gambiae Tc1-like transposase...    24   3.6  
AF283269-1|AAG15374.1|  114|Anopheles gambiae ribosomal protein ...    24   4.7  

>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal
           ion/proton exchanger 3 protein.
          Length = 1221

 Score = 30.7 bits (66), Expect = 0.041
 Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
 Frame = +2

Query: 2   VFFSFLFNSIYSIVSNLYKSPNIFYIRYI*LCYL-QIVLFLSKLHGLAIFAMITTTIRNY 178
           V  + +F S+Y I+  L  S      R   L  + Q V+    L G   FA++     N+
Sbjct: 560 VLLTIIFCSVYRILGVLILSALANRFRIHKLTKVDQFVMSYGGLRGAVAFALVLLVDVNH 619

Query: 179 LKIPNVYITTTFMKTYIFTSF 241
           + +  +++TTT    Y FT F
Sbjct: 620 IPLQPMFLTTTIAVVY-FTVF 639


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 26.2 bits (55), Expect = 0.89
 Identities = 15/47 (31%), Positives = 20/47 (42%)
 Frame = -2

Query: 440  LSSIHIFCNN*LK*MLHYCISLSMHSQHSTIQNYLNFLLVKKILNHF 300
            L S H   NN     L YCI  S  +   T ++Y     + +I  HF
Sbjct: 2997 LPSYHNITNNNSVMRLEYCIDCSQDASSITSKSYKVTNWINEIFEHF 3043


>U89799-1|AAD03792.1|  332|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 332

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = -3

Query: 76  IKYVWRFVQIAHDAVN*IK 20
           IKYVWRF   A+   N IK
Sbjct: 156 IKYVWRFPNQAYHPKNTIK 174


>AF283269-1|AAG15374.1|  114|Anopheles gambiae ribosomal protein S26
           protein.
          Length = 114

 Score = 23.8 bits (49), Expect = 4.7
 Identities = 7/12 (58%), Positives = 11/12 (91%)
 Frame = -2

Query: 395 LHYCISLSMHSQ 360
           LHYC+S ++HS+
Sbjct: 70  LHYCVSCAIHSK 81


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 600,689
Number of Sequences: 2352
Number of extensions: 12022
Number of successful extensions: 69
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 68
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 69
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63559560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)