Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0067
         (645 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY128467-1|AAM75060.1|  999|Drosophila melanogaster RE21674p pro...    31   1.8  
AY048581-1|AAL35394.1|  582|Drosophila melanogaster sodium-hydro...    31   1.8  
AF235935-1|AAF60313.1| 1203|Drosophila melanogaster sodium/hydro...    31   1.8  
AE014134-3339|AAF53961.2| 1291|Drosophila melanogaster CG9256-PB...    31   1.8  
AE014134-3338|AAF53960.2| 1291|Drosophila melanogaster CG9256-PA...    31   1.8  

>AY128467-1|AAM75060.1|  999|Drosophila melanogaster RE21674p
           protein.
          Length = 999

 Score = 30.7 bits (66), Expect = 1.8
 Identities = 16/46 (34%), Positives = 23/46 (50%)
 Frame = +2

Query: 104 QIVLFLSKLHGLAIFAMITTTIRNYLKIPNVYITTTFMKTYIFTSF 241
           Q V+    L G   FA++     N +K  N+++TTT    Y FT F
Sbjct: 547 QFVMSYGGLRGAVAFALVLLVDENVVKQKNMFVTTTIAVIY-FTVF 591


>AY048581-1|AAL35394.1|  582|Drosophila melanogaster sodium-hydrogen
           exchanger NHE2precursor protein.
          Length = 582

 Score = 30.7 bits (66), Expect = 1.8
 Identities = 16/46 (34%), Positives = 23/46 (50%)
 Frame = +2

Query: 104 QIVLFLSKLHGLAIFAMITTTIRNYLKIPNVYITTTFMKTYIFTSF 241
           Q V+    L G   FA++     N +K  N+++TTT    Y FT F
Sbjct: 457 QFVMSYGGLRGAVAFALVLLVDENVVKQKNMFVTTTIAVIY-FTVF 501


>AF235935-1|AAF60313.1| 1203|Drosophila melanogaster sodium/hydrogen
           exchanger protein protein.
          Length = 1203

 Score = 30.7 bits (66), Expect = 1.8
 Identities = 16/46 (34%), Positives = 23/46 (50%)
 Frame = +2

Query: 104 QIVLFLSKLHGLAIFAMITTTIRNYLKIPNVYITTTFMKTYIFTSF 241
           Q V+    L G   FA++     N +K  N+++TTT    Y FT F
Sbjct: 529 QFVMSYGGLRGAVAFALVLLVDENVVKQKNMFVTTTIAVIY-FTVF 573


>AE014134-3339|AAF53961.2| 1291|Drosophila melanogaster CG9256-PB,
           isoform B protein.
          Length = 1291

 Score = 30.7 bits (66), Expect = 1.8
 Identities = 16/46 (34%), Positives = 23/46 (50%)
 Frame = +2

Query: 104 QIVLFLSKLHGLAIFAMITTTIRNYLKIPNVYITTTFMKTYIFTSF 241
           Q V+    L G   FA++     N +K  N+++TTT    Y FT F
Sbjct: 547 QFVMSYGGLRGAVAFALVLLVDENVVKQKNMFVTTTIAVIY-FTVF 591


>AE014134-3338|AAF53960.2| 1291|Drosophila melanogaster CG9256-PA,
           isoform A protein.
          Length = 1291

 Score = 30.7 bits (66), Expect = 1.8
 Identities = 16/46 (34%), Positives = 23/46 (50%)
 Frame = +2

Query: 104 QIVLFLSKLHGLAIFAMITTTIRNYLKIPNVYITTTFMKTYIFTSF 241
           Q V+    L G   FA++     N +K  N+++TTT    Y FT F
Sbjct: 547 QFVMSYGGLRGAVAFALVLLVDENVVKQKNMFVTTTIAVIY-FTVF 591


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,566,687
Number of Sequences: 53049
Number of extensions: 419897
Number of successful extensions: 814
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 784
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 813
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2724262200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)