Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0067
(645 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
S42187-1|AAB22845.1| 1475|Caenorhabditis elegans pTra2A protein. 31 0.92
M91371-1|AAA28150.1| 1475|Caenorhabditis elegans membrane protei... 31 0.92
AC006608-1|AAF39755.1| 1475|Caenorhabditis elegans Transformer :... 31 0.92
Z93398-9|CAN99698.1| 1497|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z93398-8|CAJ80823.1| 3424|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z93398-7|CAD90188.2| 4955|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z93398-6|CAD90187.2| 4944|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z93398-5|CAD90186.2| 3436|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z93398-4|CAH04743.1| 4410|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z93398-3|CAH04742.1| 3322|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z93398-2|CAH04741.1| 3323|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z93398-1|CAH04740.1| 3405|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z92788-9|CAN99699.1| 1497|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z92788-8|CAJ80815.1| 3424|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z92788-7|CAD90177.2| 4955|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z92788-6|CAD90176.2| 4944|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z92788-5|CAD90175.2| 3436|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z92788-4|CAH04711.1| 4410|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z92788-3|CAH04710.1| 3322|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z92788-2|CAH04709.1| 3323|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z92788-1|CAH04708.1| 3405|Caenorhabditis elegans Hypothetical pr... 29 3.7
AL110484-27|CAI46626.1| 397|Caenorhabditis elegans Hypothetical... 29 3.7
AL031637-4|CAD90184.2| 4955|Caenorhabditis elegans Hypothetical ... 29 3.7
AL031637-3|CAD90183.2| 4944|Caenorhabditis elegans Hypothetical ... 29 3.7
AL031637-2|CAH04759.1| 4410|Caenorhabditis elegans Hypothetical ... 29 3.7
AJ505905-1|CAD44516.1| 3522|Caenorhabditis elegans VAB-10B prote... 29 3.7
AJ505904-1|CAD44515.1| 3436|Caenorhabditis elegans VAB-10A prote... 29 3.7
AJ505903-1|CAD44514.1| 3436|Caenorhabditis elegans VAB-10A prote... 29 3.7
AJ505816-1|CAD44324.1| 4944|Caenorhabditis elegans VAB-10B prote... 29 3.7
AJ505815-1|CAD44323.1| 3436|Caenorhabditis elegans VAB-10A prote... 29 3.7
Z70271-5|CAA94233.2| 443|Caenorhabditis elegans Hypothetical pr... 28 4.9
AF031477-1|AAC15586.1| 443|Caenorhabditis elegans delta6-fatty-... 28 4.9
Z66520-7|CAA91384.1| 286|Caenorhabditis elegans Hypothetical pr... 28 6.5
U97000-8|AAC47999.1| 347|Caenorhabditis elegans Seven tm recept... 28 6.5
U27312-11|AAA68254.1| 461|Caenorhabditis elegans Forkhead trans... 27 8.6
>S42187-1|AAB22845.1| 1475|Caenorhabditis elegans pTra2A protein.
Length = 1475
Score = 30.7 bits (66), Expect = 0.92
Identities = 23/77 (29%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Frame = +2
Query: 5 FFSFLFN--SIYSIVSNLYKSPNIFYIRYI*LCYLQIV-LFLSKLHGLAIFAMITTTIRN 175
FF L SI +I+ ++ NIF++ + L +QIV +F S + +A M + +R+
Sbjct: 1037 FFVLLITAFSILAIICSIVPELNIFFVPTVILIVIQIVAVFNSIIVSIATKQMFESEVRH 1096
Query: 176 YLKIPNVYITTTFMKTY 226
YL ++ +TT ++ Y
Sbjct: 1097 YLH-RDLRGSTTAVRVY 1112
>M91371-1|AAA28150.1| 1475|Caenorhabditis elegans membrane protein
protein.
Length = 1475
Score = 30.7 bits (66), Expect = 0.92
Identities = 23/77 (29%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Frame = +2
Query: 5 FFSFLFN--SIYSIVSNLYKSPNIFYIRYI*LCYLQIV-LFLSKLHGLAIFAMITTTIRN 175
FF L SI +I+ ++ NIF++ + L +QIV +F S + +A M + +R+
Sbjct: 1037 FFVLLITAFSILAIICSIVPELNIFFVPTVILIVIQIVAVFNSIIVSIATKQMFESEVRH 1096
Query: 176 YLKIPNVYITTTFMKTY 226
YL ++ +TT ++ Y
Sbjct: 1097 YLH-RDLRGSTTAVRVY 1112
>AC006608-1|AAF39755.1| 1475|Caenorhabditis elegans Transformer : xx
animals transformedinto males protein 2, isoform a
protein.
Length = 1475
Score = 30.7 bits (66), Expect = 0.92
Identities = 23/77 (29%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Frame = +2
Query: 5 FFSFLFN--SIYSIVSNLYKSPNIFYIRYI*LCYLQIV-LFLSKLHGLAIFAMITTTIRN 175
FF L SI +I+ ++ NIF++ + L +QIV +F S + +A M + +R+
Sbjct: 1037 FFVLLITAFSILAIICSIVPELNIFFVPTVILIVIQIVAVFNSIIVSIATKQMFESEVRH 1096
Query: 176 YLKIPNVYITTTFMKTY 226
YL ++ +TT ++ Y
Sbjct: 1097 YLH-RDLRGSTTAVRVY 1112
>Z93398-9|CAN99698.1| 1497|Caenorhabditis elegans Hypothetical
protein ZK1151.1i protein.
Length = 1497
Score = 28.7 bits (61), Expect = 3.7
Identities = 10/36 (27%), Positives = 24/36 (66%)
Frame = +2
Query: 371 WIEIYNNVTFILTNYYKRYVYYLKILNEEHYDLHHK 478
W +I +LTNYYK+ ++ +++ +++ D+H++
Sbjct: 786 WSDIKQLDLPMLTNYYKQLLHEMELREKQYNDVHNQ 821
>Z93398-8|CAJ80823.1| 3424|Caenorhabditis elegans Hypothetical
protein ZK1151.1h protein.
Length = 3424
Score = 28.7 bits (61), Expect = 3.7
Identities = 10/36 (27%), Positives = 24/36 (66%)
Frame = +2
Query: 371 WIEIYNNVTFILTNYYKRYVYYLKILNEEHYDLHHK 478
W +I +LTNYYK+ ++ +++ +++ D+H++
Sbjct: 659 WSDIKQLDLPMLTNYYKQLLHEMELREKQYNDVHNQ 694
>Z93398-7|CAD90188.2| 4955|Caenorhabditis elegans Hypothetical
protein ZK1151.1c protein.
Length = 4955
Score = 28.7 bits (61), Expect = 3.7
Identities = 10/36 (27%), Positives = 24/36 (66%)
Frame = +2
Query: 371 WIEIYNNVTFILTNYYKRYVYYLKILNEEHYDLHHK 478
W +I +LTNYYK+ ++ +++ +++ D+H++
Sbjct: 659 WSDIKQLDLPMLTNYYKQLLHEMELREKQYNDVHNQ 694
>Z93398-6|CAD90187.2| 4944|Caenorhabditis elegans Hypothetical
protein ZK1151.1b protein.
Length = 4944
Score = 28.7 bits (61), Expect = 3.7
Identities = 10/36 (27%), Positives = 24/36 (66%)
Frame = +2
Query: 371 WIEIYNNVTFILTNYYKRYVYYLKILNEEHYDLHHK 478
W +I +LTNYYK+ ++ +++ +++ D+H++
Sbjct: 659 WSDIKQLDLPMLTNYYKQLLHEMELREKQYNDVHNQ 694
>Z93398-5|CAD90186.2| 3436|Caenorhabditis elegans Hypothetical
protein ZK1151.1a protein.
Length = 3436
Score = 28.7 bits (61), Expect = 3.7
Identities = 10/36 (27%), Positives = 24/36 (66%)
Frame = +2
Query: 371 WIEIYNNVTFILTNYYKRYVYYLKILNEEHYDLHHK 478
W +I +LTNYYK+ ++ +++ +++ D+H++
Sbjct: 659 WSDIKQLDLPMLTNYYKQLLHEMELREKQYNDVHNQ 694
>Z93398-4|CAH04743.1| 4410|Caenorhabditis elegans Hypothetical
protein ZK1151.1g protein.
Length = 4410
Score = 28.7 bits (61), Expect = 3.7
Identities = 10/36 (27%), Positives = 24/36 (66%)
Frame = +2
Query: 371 WIEIYNNVTFILTNYYKRYVYYLKILNEEHYDLHHK 478
W +I +LTNYYK+ ++ +++ +++ D+H++
Sbjct: 659 WSDIKQLDLPMLTNYYKQLLHEMELREKQYNDVHNQ 694
>Z93398-3|CAH04742.1| 3322|Caenorhabditis elegans Hypothetical
protein ZK1151.1f protein.
Length = 3322
Score = 28.7 bits (61), Expect = 3.7
Identities = 10/36 (27%), Positives = 24/36 (66%)
Frame = +2
Query: 371 WIEIYNNVTFILTNYYKRYVYYLKILNEEHYDLHHK 478
W +I +LTNYYK+ ++ +++ +++ D+H++
Sbjct: 659 WSDIKQLDLPMLTNYYKQLLHEMELREKQYNDVHNQ 694
>Z93398-2|CAH04741.1| 3323|Caenorhabditis elegans Hypothetical
protein ZK1151.1e protein.
Length = 3323
Score = 28.7 bits (61), Expect = 3.7
Identities = 10/36 (27%), Positives = 24/36 (66%)
Frame = +2
Query: 371 WIEIYNNVTFILTNYYKRYVYYLKILNEEHYDLHHK 478
W +I +LTNYYK+ ++ +++ +++ D+H++
Sbjct: 546 WSDIKQLDLPMLTNYYKQLLHEMELREKQYNDVHNQ 581
>Z93398-1|CAH04740.1| 3405|Caenorhabditis elegans Hypothetical
protein ZK1151.1d protein.
Length = 3405
Score = 28.7 bits (61), Expect = 3.7
Identities = 10/36 (27%), Positives = 24/36 (66%)
Frame = +2
Query: 371 WIEIYNNVTFILTNYYKRYVYYLKILNEEHYDLHHK 478
W +I +LTNYYK+ ++ +++ +++ D+H++
Sbjct: 628 WSDIKQLDLPMLTNYYKQLLHEMELREKQYNDVHNQ 663
>Z92788-9|CAN99699.1| 1497|Caenorhabditis elegans Hypothetical
protein ZK1151.1i protein.
Length = 1497
Score = 28.7 bits (61), Expect = 3.7
Identities = 10/36 (27%), Positives = 24/36 (66%)
Frame = +2
Query: 371 WIEIYNNVTFILTNYYKRYVYYLKILNEEHYDLHHK 478
W +I +LTNYYK+ ++ +++ +++ D+H++
Sbjct: 786 WSDIKQLDLPMLTNYYKQLLHEMELREKQYNDVHNQ 821
>Z92788-8|CAJ80815.1| 3424|Caenorhabditis elegans Hypothetical
protein ZK1151.1h protein.
Length = 3424
Score = 28.7 bits (61), Expect = 3.7
Identities = 10/36 (27%), Positives = 24/36 (66%)
Frame = +2
Query: 371 WIEIYNNVTFILTNYYKRYVYYLKILNEEHYDLHHK 478
W +I +LTNYYK+ ++ +++ +++ D+H++
Sbjct: 659 WSDIKQLDLPMLTNYYKQLLHEMELREKQYNDVHNQ 694
>Z92788-7|CAD90177.2| 4955|Caenorhabditis elegans Hypothetical
protein ZK1151.1c protein.
Length = 4955
Score = 28.7 bits (61), Expect = 3.7
Identities = 10/36 (27%), Positives = 24/36 (66%)
Frame = +2
Query: 371 WIEIYNNVTFILTNYYKRYVYYLKILNEEHYDLHHK 478
W +I +LTNYYK+ ++ +++ +++ D+H++
Sbjct: 659 WSDIKQLDLPMLTNYYKQLLHEMELREKQYNDVHNQ 694
>Z92788-6|CAD90176.2| 4944|Caenorhabditis elegans Hypothetical
protein ZK1151.1b protein.
Length = 4944
Score = 28.7 bits (61), Expect = 3.7
Identities = 10/36 (27%), Positives = 24/36 (66%)
Frame = +2
Query: 371 WIEIYNNVTFILTNYYKRYVYYLKILNEEHYDLHHK 478
W +I +LTNYYK+ ++ +++ +++ D+H++
Sbjct: 659 WSDIKQLDLPMLTNYYKQLLHEMELREKQYNDVHNQ 694
>Z92788-5|CAD90175.2| 3436|Caenorhabditis elegans Hypothetical
protein ZK1151.1a protein.
Length = 3436
Score = 28.7 bits (61), Expect = 3.7
Identities = 10/36 (27%), Positives = 24/36 (66%)
Frame = +2
Query: 371 WIEIYNNVTFILTNYYKRYVYYLKILNEEHYDLHHK 478
W +I +LTNYYK+ ++ +++ +++ D+H++
Sbjct: 659 WSDIKQLDLPMLTNYYKQLLHEMELREKQYNDVHNQ 694
>Z92788-4|CAH04711.1| 4410|Caenorhabditis elegans Hypothetical
protein ZK1151.1g protein.
Length = 4410
Score = 28.7 bits (61), Expect = 3.7
Identities = 10/36 (27%), Positives = 24/36 (66%)
Frame = +2
Query: 371 WIEIYNNVTFILTNYYKRYVYYLKILNEEHYDLHHK 478
W +I +LTNYYK+ ++ +++ +++ D+H++
Sbjct: 659 WSDIKQLDLPMLTNYYKQLLHEMELREKQYNDVHNQ 694
>Z92788-3|CAH04710.1| 3322|Caenorhabditis elegans Hypothetical
protein ZK1151.1f protein.
Length = 3322
Score = 28.7 bits (61), Expect = 3.7
Identities = 10/36 (27%), Positives = 24/36 (66%)
Frame = +2
Query: 371 WIEIYNNVTFILTNYYKRYVYYLKILNEEHYDLHHK 478
W +I +LTNYYK+ ++ +++ +++ D+H++
Sbjct: 659 WSDIKQLDLPMLTNYYKQLLHEMELREKQYNDVHNQ 694
>Z92788-2|CAH04709.1| 3323|Caenorhabditis elegans Hypothetical
protein ZK1151.1e protein.
Length = 3323
Score = 28.7 bits (61), Expect = 3.7
Identities = 10/36 (27%), Positives = 24/36 (66%)
Frame = +2
Query: 371 WIEIYNNVTFILTNYYKRYVYYLKILNEEHYDLHHK 478
W +I +LTNYYK+ ++ +++ +++ D+H++
Sbjct: 546 WSDIKQLDLPMLTNYYKQLLHEMELREKQYNDVHNQ 581
>Z92788-1|CAH04708.1| 3405|Caenorhabditis elegans Hypothetical
protein ZK1151.1d protein.
Length = 3405
Score = 28.7 bits (61), Expect = 3.7
Identities = 10/36 (27%), Positives = 24/36 (66%)
Frame = +2
Query: 371 WIEIYNNVTFILTNYYKRYVYYLKILNEEHYDLHHK 478
W +I +LTNYYK+ ++ +++ +++ D+H++
Sbjct: 628 WSDIKQLDLPMLTNYYKQLLHEMELREKQYNDVHNQ 663
>AL110484-27|CAI46626.1| 397|Caenorhabditis elegans Hypothetical
protein Y38E10A.28 protein.
Length = 397
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/50 (28%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = +2
Query: 383 YNNVTFILTNYYKRYVYYLKILNEEHYDLHHKLVIYVFRETI--FCINSN 526
Y + FI+ + YY+ ++EH L + L +++F +I FC +N
Sbjct: 289 YCQILFIILFFALSQAYYISNCSKEHCPLENDLAVWIFCPSILLFCPVNN 338
>AL031637-4|CAD90184.2| 4955|Caenorhabditis elegans Hypothetical
protein ZK1151.1c protein.
Length = 4955
Score = 28.7 bits (61), Expect = 3.7
Identities = 10/36 (27%), Positives = 24/36 (66%)
Frame = +2
Query: 371 WIEIYNNVTFILTNYYKRYVYYLKILNEEHYDLHHK 478
W +I +LTNYYK+ ++ +++ +++ D+H++
Sbjct: 659 WSDIKQLDLPMLTNYYKQLLHEMELREKQYNDVHNQ 694
>AL031637-3|CAD90183.2| 4944|Caenorhabditis elegans Hypothetical
protein ZK1151.1b protein.
Length = 4944
Score = 28.7 bits (61), Expect = 3.7
Identities = 10/36 (27%), Positives = 24/36 (66%)
Frame = +2
Query: 371 WIEIYNNVTFILTNYYKRYVYYLKILNEEHYDLHHK 478
W +I +LTNYYK+ ++ +++ +++ D+H++
Sbjct: 659 WSDIKQLDLPMLTNYYKQLLHEMELREKQYNDVHNQ 694
>AL031637-2|CAH04759.1| 4410|Caenorhabditis elegans Hypothetical
protein ZK1151.1g protein.
Length = 4410
Score = 28.7 bits (61), Expect = 3.7
Identities = 10/36 (27%), Positives = 24/36 (66%)
Frame = +2
Query: 371 WIEIYNNVTFILTNYYKRYVYYLKILNEEHYDLHHK 478
W +I +LTNYYK+ ++ +++ +++ D+H++
Sbjct: 659 WSDIKQLDLPMLTNYYKQLLHEMELREKQYNDVHNQ 694
>AJ505905-1|CAD44516.1| 3522|Caenorhabditis elegans VAB-10B protein
protein.
Length = 3522
Score = 28.7 bits (61), Expect = 3.7
Identities = 10/36 (27%), Positives = 24/36 (66%)
Frame = +2
Query: 371 WIEIYNNVTFILTNYYKRYVYYLKILNEEHYDLHHK 478
W +I +LTNYYK+ ++ +++ +++ D+H++
Sbjct: 659 WSDIKQLDLPMLTNYYKQLLHEMELREKQYNDVHNQ 694
>AJ505904-1|CAD44515.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 28.7 bits (61), Expect = 3.7
Identities = 10/36 (27%), Positives = 24/36 (66%)
Frame = +2
Query: 371 WIEIYNNVTFILTNYYKRYVYYLKILNEEHYDLHHK 478
W +I +LTNYYK+ ++ +++ +++ D+H++
Sbjct: 659 WSDIKQLDLPMLTNYYKQLLHEMELREKQYNDVHNQ 694
>AJ505903-1|CAD44514.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 28.7 bits (61), Expect = 3.7
Identities = 10/36 (27%), Positives = 24/36 (66%)
Frame = +2
Query: 371 WIEIYNNVTFILTNYYKRYVYYLKILNEEHYDLHHK 478
W +I +LTNYYK+ ++ +++ +++ D+H++
Sbjct: 659 WSDIKQLDLPMLTNYYKQLLHEMELREKQYNDVHNQ 694
>AJ505816-1|CAD44324.1| 4944|Caenorhabditis elegans VAB-10B protein
protein.
Length = 4944
Score = 28.7 bits (61), Expect = 3.7
Identities = 10/36 (27%), Positives = 24/36 (66%)
Frame = +2
Query: 371 WIEIYNNVTFILTNYYKRYVYYLKILNEEHYDLHHK 478
W +I +LTNYYK+ ++ +++ +++ D+H++
Sbjct: 659 WSDIKQLDLPMLTNYYKQLLHEMELREKQYNDVHNQ 694
>AJ505815-1|CAD44323.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 28.7 bits (61), Expect = 3.7
Identities = 10/36 (27%), Positives = 24/36 (66%)
Frame = +2
Query: 371 WIEIYNNVTFILTNYYKRYVYYLKILNEEHYDLHHK 478
W +I +LTNYYK+ ++ +++ +++ D+H++
Sbjct: 659 WSDIKQLDLPMLTNYYKQLLHEMELREKQYNDVHNQ 694
>Z70271-5|CAA94233.2| 443|Caenorhabditis elegans Hypothetical
protein W08D2.4 protein.
Length = 443
Score = 28.3 bits (60), Expect = 4.9
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +3
Query: 63 QTYFIFDTYNYVIYKSFYFYLNYTDW 140
+TYF+F + + +F FYL Y W
Sbjct: 123 ETYFLFKAISTLSIMAFAFYLQYLGW 148
>AF031477-1|AAC15586.1| 443|Caenorhabditis elegans
delta6-fatty-acid-desaturase protein.
Length = 443
Score = 28.3 bits (60), Expect = 4.9
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +3
Query: 63 QTYFIFDTYNYVIYKSFYFYLNYTDW 140
+TYF+F + + +F FYL Y W
Sbjct: 123 ETYFLFKAISTLSIMAFAFYLQYLGW 148
>Z66520-7|CAA91384.1| 286|Caenorhabditis elegans Hypothetical
protein F49E12.10 protein.
Length = 286
Score = 27.9 bits (59), Expect = 6.5
Identities = 9/34 (26%), Positives = 20/34 (58%)
Frame = +2
Query: 380 IYNNVTFILTNYYKRYVYYLKILNEEHYDLHHKL 481
I+ + + T ++ ++ +L+ EH+D HHK+
Sbjct: 188 IFTSYAILTTTFHHSGYHFPFMLSAEHHDFHHKV 221
>U97000-8|AAC47999.1| 347|Caenorhabditis elegans Seven tm receptor
protein 136 protein.
Length = 347
Score = 27.9 bits (59), Expect = 6.5
Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 5/68 (7%)
Frame = +2
Query: 71 FYIRYI*LCYLQIVLFLS--KLHGL---AIFAMITTTIRNYLKIPNVYITTTFMKTYIFT 235
F+ RY+ LC ++++L KL + ++ I I Y +PN+ ++K
Sbjct: 114 FFYRYVALCKTHLLVYLQGKKLFLIFTPSVIVFIIWFIMFYFGMPNILEKQEYLKKEFKI 173
Query: 236 SFNIVESK 259
FN+ SK
Sbjct: 174 CFNVDSSK 181
>U27312-11|AAA68254.1| 461|Caenorhabditis elegans Forkhead
transcription factor familyprotein 5 protein.
Length = 461
Score = 27.5 bits (58), Expect = 8.6
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = +3
Query: 75 IFDTYNYVIYKSFYFYLNY 131
+F + ++I+KSFY YL Y
Sbjct: 42 LFPSIKWIIHKSFYLYLTY 60
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,103,758
Number of Sequences: 27780
Number of extensions: 257873
Number of successful extensions: 705
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 672
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 705
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1423653030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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