Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0066
         (769 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g33985.1 68417.m04822 expressed protein                             30   1.5  
At5g42140.1 68418.m05130 zinc finger protein, putative / regulat...    28   7.9  
At4g07435.1 68417.m01141 cytochrome P-450 aromatase-related simi...    28   7.9  
At2g05870.1 68415.m00636 cytochrome P-450 aromatase-related simi...    28   7.9  
At1g64890.1 68414.m07356 integral membrane transporter family pr...    28   7.9  

>At4g33985.1 68417.m04822 expressed protein
          Length = 154

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = +2

Query: 89  HEMRSRA*AEEAWLRRKSHEELGMSGRAR 175
           H     A  EEAWLR+K  + LG  GR++
Sbjct: 19  HSWSPDADREEAWLRKKGKQSLGRLGRSK 47


>At5g42140.1 68418.m05130 zinc finger protein, putative / regulator
           of chromosome condensation (RCC1) family protein similar
           to zinc finger protein [Arabidopsis thaliana]
           gi|15811367|gb|AAL08940
          Length = 1073

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = +2

Query: 455 SARLSIRSPRNRTVCLVRFFNVPDS 529
           S  L++ SP N +VC  R FN+ DS
Sbjct: 140 SRDLTLSSPTNSSVCASRDFNIADS 164


>At4g07435.1 68417.m01141 cytochrome P-450 aromatase-related similar
           to minor outer capsid protein VP4 (GI:13446784) [Human
           rotavirus C]; similar to cytochrome P-450 aromatase
           (GI:21170) [Gallus gallus];
          Length = 193

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +2

Query: 485 NRTVCLVRFFNVPDSVKV*CVCSWNSA 565
           N T+C++RF+NV D     C+ S N A
Sbjct: 130 NPTICVLRFWNVDDHEGRQCLISHNGA 156


>At2g05870.1 68415.m00636 cytochrome P-450 aromatase-related similar
           to minor outer capsid protein VP4 (GI:13446784) [Human
           rotavirus C]; similar to cytochrome P-450 aromatase
           (GI:21170) [Gallus gallus];
          Length = 161

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +2

Query: 485 NRTVCLVRFFNVPDSVKV*CVCSWNSA 565
           N T+C++RF+NV D     C+ S N A
Sbjct: 98  NPTICVLRFWNVDDHEGRQCLISHNGA 124


>At1g64890.1 68414.m07356 integral membrane transporter family
           protein contains 11 transmembrane domains; contains Pfam
           PF03092: BT1 family; contains TIGRFAMS TIGR00788:
           folate/biopterin transporter
          Length = 442

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 15/36 (41%), Positives = 20/36 (55%)
 Frame = +3

Query: 612 VNFYVIENVKKLALSVQIAYSNLGAQLLRQKCGAII 719
           + F    NV  LALS+ +  SNLGA L+     AI+
Sbjct: 104 IAFLSRSNVSILALSIYLLLSNLGASLVEVANDAIV 139


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,648,066
Number of Sequences: 28952
Number of extensions: 269367
Number of successful extensions: 657
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 646
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 657
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1721869952
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)