Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0063
         (791 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    22   4.9  
AM712904-1|CAN84643.1|   86|Tribolium castaneum hypothetical pro...    22   4.9  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    21   8.5  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    21   8.5  

>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -2

Query: 505 DSFVSNSLICATLGSFFLLV 446
           D ++   L+C  LG F L++
Sbjct: 100 DQYLLEQLVCEQLGGFLLIL 119


>AM712904-1|CAN84643.1|   86|Tribolium castaneum hypothetical
           protein protein.
          Length = 86

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 12/37 (32%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
 Frame = -2

Query: 280 SCLSSCLIPG--SHYLLGYVLRNQPVALFHRHSCRLN 176
           S L   +I G  S +++GYV    P+AL ++++   N
Sbjct: 27  SALGFLIIAGCVSPFVIGYVKHFHPLALSNKNAIDFN 63


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -1

Query: 122 VCVNFLVLFIRHFSKINKR 66
           V   FL LF+ H+  IN++
Sbjct: 228 VISTFLQLFLEHYEVINRQ 246


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -1

Query: 122 VCVNFLVLFIRHFSKINKR 66
           V   FL LF+ H+  IN++
Sbjct: 154 VISTFLQLFLEHYEVINRQ 172


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,361
Number of Sequences: 336
Number of extensions: 3039
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21480183
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)