Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0063
         (791 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          25   2.7  
AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona...    24   4.7  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    23   8.2  

>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 25.0 bits (52), Expect = 2.7
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = -1

Query: 263 LNTWKSLSSGLRPSKSACSSFSPT*LPSESKSESFSLPES 144
           L   ++ +S L PS S+ S  SP+ + S +   S   PES
Sbjct: 55  LGPGRTYASALSPSSSSASPSSPSSVASPNSRASNMSPES 94


>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
           anion exchanger protein.
          Length = 1102

 Score = 24.2 bits (50), Expect = 4.7
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = -2

Query: 499 FVSNSLICATLGSFFLLVIFTTVVTPK 419
           F+S+  +   + S  LL +FT + TPK
Sbjct: 758 FISDFSVTIAIFSMTLLDVFTRIATPK 784


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 23.4 bits (48), Expect = 8.2
 Identities = 9/26 (34%), Positives = 17/26 (65%)
 Frame = +3

Query: 612 QRLAYHYLHHYRLNLRKLIGKNMLYN 689
           Q+   H+ HH+    ++++GKN LY+
Sbjct: 780 QQQQQHH-HHHLQQQQQIVGKNTLYS 804


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 680,205
Number of Sequences: 2352
Number of extensions: 11730
Number of successful extensions: 17
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 83160600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)