Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0063
         (791 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49128-8|CAA88960.2|  989|Caenorhabditis elegans Hypothetical pr...    29   2.9  
AL021171-6|CAA15960.2|  989|Caenorhabditis elegans Hypothetical ...    29   2.9  
Z68752-9|CAA92985.1| 1208|Caenorhabditis elegans Hypothetical pr...    28   6.7  
Z68316-8|CAA92685.1| 1208|Caenorhabditis elegans Hypothetical pr...    28   6.7  
U58758-10|AAB93435.1|  349|Caenorhabditis elegans Hypothetical p...    28   6.7  

>Z49128-8|CAA88960.2|  989|Caenorhabditis elegans Hypothetical
           protein M03C11.8 protein.
          Length = 989

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 16/44 (36%), Positives = 24/44 (54%)
 Frame = +1

Query: 124 AKATKEQDSGSEKDSDFDSDGNYVGEKELQADFEGRNPEDSDFQ 255
           AKA KEQ   +E D D++ D     E ++ AD +    +DSD +
Sbjct: 239 AKAQKEQKKKAESDEDWEED-----EDDMNADGDETPSDDSDIE 277


>AL021171-6|CAA15960.2|  989|Caenorhabditis elegans Hypothetical
           protein M03C11.8 protein.
          Length = 989

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 16/44 (36%), Positives = 24/44 (54%)
 Frame = +1

Query: 124 AKATKEQDSGSEKDSDFDSDGNYVGEKELQADFEGRNPEDSDFQ 255
           AKA KEQ   +E D D++ D     E ++ AD +    +DSD +
Sbjct: 239 AKAQKEQKKKAESDEDWEED-----EDDMNADGDETPSDDSDIE 277


>Z68752-9|CAA92985.1| 1208|Caenorhabditis elegans Hypothetical
           protein K08E4.1 protein.
          Length = 1208

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
 Frame = +1

Query: 94  IKRTRKLTQTAKATKEQDSGSEKDS--DFDSDGNYVGEKELQADFEGRNPEDSDF 252
           IK ++K  +   A++ + SGS+ D   D D D N   +K  +   + + P   DF
Sbjct: 28  IKNSKKDRKRKLASESEKSGSDDDDDDDDDEDENVTSKKSKKQKRKNKAPSGRDF 82


>Z68316-8|CAA92685.1| 1208|Caenorhabditis elegans Hypothetical
           protein K08E4.1 protein.
          Length = 1208

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
 Frame = +1

Query: 94  IKRTRKLTQTAKATKEQDSGSEKDS--DFDSDGNYVGEKELQADFEGRNPEDSDF 252
           IK ++K  +   A++ + SGS+ D   D D D N   +K  +   + + P   DF
Sbjct: 28  IKNSKKDRKRKLASESEKSGSDDDDDDDDDEDENVTSKKSKKQKRKNKAPSGRDF 82


>U58758-10|AAB93435.1|  349|Caenorhabditis elegans Hypothetical
           protein ZK1127.4 protein.
          Length = 349

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 12/39 (30%), Positives = 21/39 (53%)
 Frame = +2

Query: 539 IKYILADDSQHTGLVINERILNIPAAISVPLFASLQTEL 655
           I+ I       + L +NER+LN P  +   +F S++ +L
Sbjct: 175 IEEIQVSGDGKSALFVNERLLNFPTIVVPQIFGSIREDL 213


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,244,755
Number of Sequences: 27780
Number of extensions: 278262
Number of successful extensions: 985
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 899
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 976
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1924757034
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)