Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0061
         (748 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    25   0.64 
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    24   1.1  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    23   2.6  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    23   2.6  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   3.4  

>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 25.0 bits (52), Expect = 0.64
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +1

Query: 382 RCQLFLFWYEFEVFQLHYPDNR 447
           R   +LF+Y F V  LH PD +
Sbjct: 117 RVNPYLFYYAFSVALLHRPDTQ 138


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 10/37 (27%), Positives = 19/37 (51%)
 Frame = +1

Query: 514 LNKKLTIFVSLFHIKYPLCIFNINNNKPTIYFFNKTF 624
           L++   +   L+  +Y      +   K T++FFN+TF
Sbjct: 158 LSRYQRLKAQLWQNRYETVAHGMTVQKTTLFFFNRTF 194


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 10/36 (27%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
 Frame = +1

Query: 538 VSLFHIKYPLCIFNINNN--KPTIYFFNKTFAQNQL 639
           +++F  + P+ +    N   +P+IYF +KT A++ +
Sbjct: 466 INVFSGELPVFLQEHRNGMYRPSIYFISKTLAESPI 501


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 10/36 (27%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
 Frame = +1

Query: 538 VSLFHIKYPLCIFNINNN--KPTIYFFNKTFAQNQL 639
           +++F  + P+ +    N   +P+IYF +KT A++ +
Sbjct: 466 INVFSGELPVFLQEHRNGMYRPSIYFISKTLAESPI 501


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +3

Query: 210  PRTTINVTS*LRCNSPQYYIHLS 278
            P TT++     +C+S QYY H S
Sbjct: 1195 PTTTVSQLIDDKCDSGQYYPHES 1217


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,338
Number of Sequences: 336
Number of extensions: 3057
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19923648
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)