Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0061
         (748 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_50961| Best HMM Match : Trypsin (HMM E-Value=0)                     32   0.57 
SB_35368| Best HMM Match : UIM (HMM E-Value=6.3e-06)                   28   7.0  
SB_35401| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   9.2  

>SB_50961| Best HMM Match : Trypsin (HMM E-Value=0)
          Length = 1007

 Score = 31.9 bits (69), Expect = 0.57
 Identities = 15/47 (31%), Positives = 25/47 (53%)
 Frame = +1

Query: 481 IKRQPVAYRNHLNKKLTIFVSLFHIKYPLCIFNINNNKPTIYFFNKT 621
           I+  P  + + L K+L IFV L H  +   +FN  NN+   +  ++T
Sbjct: 20  IQPLPTVHESQLRKELWIFVQLPHCPFSEILFNDQNNRNATWGVSRT 66


>SB_35368| Best HMM Match : UIM (HMM E-Value=6.3e-06)
          Length = 362

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 14/46 (30%), Positives = 22/46 (47%)
 Frame = -2

Query: 144 YIYVSDAKTSI*CINFCTSTYIVIVHTLTKLKGSAEIAYPKGVVIS 7
           YI     K  + C+ FC+ T++  V  LTK K   +    K + +S
Sbjct: 129 YITNCTVKEEVLCLGFCSVTFVEEVIDLTKDKDDRDDDLEKAIALS 174


>SB_35401| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 113

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 8/21 (38%), Positives = 15/21 (71%)
 Frame = +1

Query: 373 QSRRCQLFLFWYEFEVFQLHY 435
           Q+  C+ F+FW  F+++ +HY
Sbjct: 9   QADTCRNFIFWSLFKIYPIHY 29


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,007,124
Number of Sequences: 59808
Number of extensions: 350513
Number of successful extensions: 765
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 713
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 757
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2022185256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)