Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0061
         (748 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41278-3|AAK31512.1|  453|Caenorhabditis elegans Hypothetical pr...    31   0.87 
AF077542-8|AAC26300.2|  342|Caenorhabditis elegans Serpentine re...    29   4.6  
Z72515-5|CAH60771.2|  331|Caenorhabditis elegans Hypothetical pr...    28   8.1  

>U41278-3|AAK31512.1|  453|Caenorhabditis elegans Hypothetical
           protein F33G12.4 protein.
          Length = 453

 Score = 31.1 bits (67), Expect = 0.87
 Identities = 13/46 (28%), Positives = 20/46 (43%)
 Frame = +1

Query: 373 QSRRCQLFLFWYEFEVFQLHYPDNRWRWCNRNKKGVIKRQPVAYRN 510
           Q + C  FL   + E   L  PD  WR+C+   +  +   P+   N
Sbjct: 141 QMQSCSEFLKTLKIEPIDLRRPDKAWRFCHNLTRLTLNGNPIGAHN 186


>AF077542-8|AAC26300.2|  342|Caenorhabditis elegans Serpentine
           receptor, class z protein64 protein.
          Length = 342

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 18/54 (33%), Positives = 24/54 (44%)
 Frame = +1

Query: 262 IIYI*AYMLHKLIYIHTLYNISIYFRA**R*YKLKSYQSRRCQLFLFWYEFEVF 423
           I Y+  Y  H LI++  L  I I      +   L SYQ    Q ++FW    VF
Sbjct: 202 IPYVPFYSFHVLIFLSVLLYIPIMINIR-KHSHLASYQQNHPQRYIFWQTVVVF 254


>Z72515-5|CAH60771.2|  331|Caenorhabditis elegans Hypothetical
           protein T11A5.7 protein.
          Length = 331

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 12/32 (37%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
 Frame = +1

Query: 40  GRTFKLSECMYDY-YISRCTKINTLYRCFSVR 132
           GR    S  +Y+Y +++ C  I  +YRCF++R
Sbjct: 72  GRIMLHSLDLYNYTFLNPCAMIPNIYRCFTLR 103


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,367,234
Number of Sequences: 27780
Number of extensions: 271942
Number of successful extensions: 597
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 585
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 597
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1766990064
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)